Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g1768 ATGAAGAACTTGCCTCTCTATTCCTTCCGATCTCCGCCGTCTCTCCGGCTGCTGCTACCGGGCACCAGCCCCTTCTTGTCTCACCTCTCCTATTTCATAACACTCTCTCTCTTAGGCTTCGGAGCTCTAAAGCTCACCAAAACTAGAACCTCCACCCCAAATGACCTCAACATCTTCTTCACCTCCGTCTCTGCCGCCACCGTTTCGAGCATGTCGGTCGTCGAAATGGAAGTTTTTTCCAACATCCAACTCCTTATCATCACCACACTCATGTTCCTCGGCGGCGAAGTCTTTGTCTCCGCCGTCGGGTTCAAACTCTCCCGTTGGTTCAAATTCAAATCATTGAACGAAAAAAACCAAGTCGGTTCGGCTCAGCCCATCGACGCGGGCACCATTGATGAGTTGAGTATCTCAAAATCATCTTGGAAGGTTTTGGGTCGTGTGGTAATTGGGTATCTTTTGGCGACGAATGTTTTTGGTTCTTGTTTGATCTTCTTCTACATCATTATGGTTCCACATGCTACGCAAGTGCTTCAAAGAAAAGGCATCAACTTCTTTACTTTTTCAGTTTTCAGTACGGTTTCTACTTTTACCAACTGTGGATTCATACCCACTAATGAAAATATGATCGTCTTCAAGAACAACTCCAGCCTTTTACTGATACTCATGGCACAGGTGCTCCTCGGCGGGTGTTTGTATCCCGTGGGTCTCCGGTTGGTGATAATGGCGGCGGCGAAGGTGACGAGGAAGAAGGAGTTCAAATACATACTGAAGAACGACTCAGAGATTGGGTATTCTCATCTTTTGCCGGGGCTCCGGTGTGGGTTTCTGGTGGCGACGGCGGTGGGATTCATAGTTTTGCAGTTGATTATCTTCTGTTCGTTGGAATGGAACAACTCCGGCGGAATTTGGGACGGCATGAATCCGTACCAGAAGTTTGTGGGCTCACTTTTTCAGGTGACCAACTCAAGACATACTGGAGAATCGGTGGTGGACATCTCGGTGATCTCGCCGGCGATCTTGGTGGTCTTCGTTGTCATGATGTACCTCCCACCATACACAACTTTTTTTCCAGCAAGGAATAAAGAGATCATATATTCAATGACAAATGGGAAGAACAAAAGACAACACTTAGTGGAATTCTTGGCATTCTCTCAGCTCTCTTATTTGGCCATTTTCATCATTCTCATATGCATCACTGAGAAAGAAAAGCTAAGAGATGATCCTCTCAACTTTTCTGTGCTCAACATCACCCTTGAAGTGATCAGTGCATATGGAAATGTTGGGTTTTCAAGTGGGTATAGCTGCAAAAGACAACTTAAACTTGACAGCTCTTGCAAAGATGCATGGTATGGATTTGCGGGAAGATGGAGTGCAAAAGGAAAATTCATTCTTATTCTTGTTATGATCTTTGGAAGATTAAAAACTTTTACCATCCATTCTGCTACACCTTGGAATTTCTCATAG 1467 45.13 MKNLPLYSFRSPPSLRLLLPGTSPFLSHLSYFITLSLLGFGALKLTKTRTSTPNDLNIFFTSVSAATVSSMSVVEMEVFSNIQLLIITTLMFLGGEVFVSAVGFKLSRWFKFKSLNEKNQVGSAQPIDAGTIDELSISKSSWKVLGRVVIGYLLATNVFGSCLIFFYIIMVPHATQVLQRKGINFFTFSVFSTVSTFTNCGFIPTNENMIVFKNNSSLLLILMAQVLLGGCLYPVGLRLVIMAAAKVTRKKEFKYILKNDSEIGYSHLLPGLRCGFLVATAVGFIVLQLIIFCSLEWNNSGGIWDGMNPYQKFVGSLFQVTNSRHTGESVVDISVISPAILVVFVVMMYLPPYTTFFPARNKEIIYSMTNGKNKRQHLVEFLAFSQLSYLAIFIILICITEKEKLRDDPLNFSVLNITLEVISAYGNVGFSSGYSCKRQLKLDSSCKDAWYGFAGRWSAKGKFILILVMIFGRLKTFTIHSATPWNFS 488
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 69205921 69211266 + Tan0021622.1 Tan09g1768 764111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g1768 488 Pfam Cation transport protein 55 479 IPR003445 GO:0006812(InterPro)|GO:0008324(InterPro)|GO:0055085(InterPro)
Tan09g1768 488 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 17 114 IPR051143 GO:0005886(PANTHER)|GO:0008324(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g1765 Tan-Chr9:69162721 Tan09g1768 Tan-Chr9:69205921 1.90E-108 proximal
Tan09g1768 Tan-Chr9:69205921 Tan09g1769 Tan-Chr9:69245244 7.70E-221 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g1768 K24976 - csv:101206239 717.227