Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan09g1784 | ATGGCACAGGTTTCTCAGTTACCTTGCGACGGCGATGGCATTTGCATGCTCTGCAAGGCCAAGCCTTCCAGCTTGGAGACCATCACTTGCAAAACTTGCGTCACACCTTGGCACGTCGATTGTCTCTCAAATCCCCCTGATACATTGGCATCTACCCTTCAATGGGACTGCCCCGACTGTGACGGTTCCCCTCCTTCCGAAGATGTTCCCCTTCCACCGCCCACTGCGCCTTCCAGTGACCTGGTTGCCTCGATTCGAGCCATTGAGGCTGATGCCTCCCTGACTGACCGCGAGAAGGCAAAGAAGCGCCAAGAACTTCTCAGTGGAAAGTCTCAGTCCGACAAGGATGATCACAATGCCAACAAGGAAATGAGAAAAGGGGGGGACGATGTTTTGGATTTGTTCGACGAGAGATTAAACTGTTCCTTCTGCATGCAGTTACCTGAAAGGCCAGTCACTACTCCATGTGGCCACAATTTCTGTTTAAAATGTTTCCAGAAGTGGATTGGACAAGGAAAGAACACTTGTGCAAAGTGCCGCTGTGTGATTCCCTCCAAAATGGCTAGCCAGCCCCGTATTAATTCTACCCTTGTTGTGGCCATTCGTATGGCTAAATTGTCAAAATCAATTGTTTCTGGAGGACCTCAGAAGGTTTATCATTTTGTCCACAATAAAAATAGACCAGATAAAGCCTATACCACTGACCGGGCGCAAAAAAAGGGGAAGGCTAATGCTGCAAGTGGAAAAATATTTGTTACAATTCCATCTGATCATTTTGGCCCTATTCCTGCTGAAAATGATCCTGAGAGAAACCAGGGTGTTCTGGTTGGTGAATGCTGGGAGGATAGGTTAGAATGTCGTCAATGGGGTGCTCACTTTCCACATGTTGCAGGTATAGCGGGACAGTCAAATAATGGTGCACAATCAGTGGTTCTTTCTGGGGGCTACCAGGATGATGAAGACCATGGGGAGTGGTTCCTCTACACTGGAAGTGGAGGTAGAGACCTTAGTGGGAACAAGCGTACAAGCAAGGATCAGTCCTTTGACCAGAAATTTGAAAAATACAACAAAGCGCTACAAGTTAGTTGCTTGAAAGGTTATCCTGTTAGGGTTGTTAGATCTCACAAAGAAAAGCGTTCCTCATATGCTCCAGAGAAGGGGTTGCGGTATGATGGAATTTATAGGATTGAGAAGTGTTGGCGTAAAGTGGGAATTCAGGGCTTTAAGGTATGTCGGTATTTATTTGTTAGATGCGACAATGATCCTGCTCCATGGACAAGTGATGAACATGGAGATCGACGTAGACCCTTACCTGCAATTCCAGAGTTGAAAACAGCGACAAATATTACGGAGAGGAAGGAAGGTCCATCATGGGACTTTGACGAGAAAGATAGTCGGTGGAAGTGGACCAAAGCTCCACCGACGAGCAAGAAACCAGTTGAAACCGAAGATTCTGCTTCTGGGGAGAGGTCAAGGACAAAAATTAGGCAATCACATAATATGAATGTCCGAGAAAGGTTACTGAAAGGTTGTGTAATTATATTGAGTAAAGTCGCTAAAAAATGA | 1566 | 46.1 | MAQVSQLPCDGDGICMLCKAKPSSLETITCKTCVTPWHVDCLSNPPDTLASTLQWDCPDCDGSPPSEDVPLPPPTAPSSDLVASIRAIEADASLTDREKAKKRQELLSGKSQSDKDDHNANKEMRKGGDDVLDLFDERLNCSFCMQLPERPVTTPCGHNFCLKCFQKWIGQGKNTCAKCRCVIPSKMASQPRINSTLVVAIRMAKLSKSIVSGGPQKVYHFVHNKNRPDKAYTTDRAQKKGKANAASGKIFVTIPSDHFGPIPAENDPERNQGVLVGECWEDRLECRQWGAHFPHVAGIAGQSNNGAQSVVLSGGYQDDEDHGEWFLYTGSGGRDLSGNKRTSKDQSFDQKFEKYNKALQVSCLKGYPVRVVRSHKEKRSSYAPEKGLRYDGIYRIEKCWRKVGIQGFKVCRYLFVRCDNDPAPWTSDEHGDRRRPLPAIPELKTATNITERKEGPSWDFDEKDSRWKWTKAPPTSKKPVETEDSASGERSRTKIRQSHNMNVRERLLKGCVIILSKVAKK | 521 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 69369748 | 69375269 | + | Tan0016200.2 | Tan09g1784 | 764127 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan09g1784 | 521 | MobiDBLite | consensus disorder prediction | 93 | 125 | - | - | |
Tan09g1784 | 521 | Gene3D | - | 240 | 438 | IPR036987 | - | |
Tan09g1784 | 521 | ProSiteProfiles | YDG domain profile. | 269 | 417 | IPR003105 | - | |
Tan09g1784 | 521 | FunFam | E3 ubiquitin-protein ligase ORTHRUS 2 | 240 | 435 | - | - | |
Tan09g1784 | 521 | SUPERFAMILY | FYVE/PHD zinc finger | 7 | 63 | IPR011011 | - | |
Tan09g1784 | 521 | SUPERFAMILY | RING/U-box | 132 | 187 | - | - | |
Tan09g1784 | 521 | SMART | ring_2 | 141 | 179 | IPR001841 | - | |
Tan09g1784 | 521 | ProSiteProfiles | Zinc finger RING-type profile. | 141 | 180 | IPR001841 | - | |
Tan09g1784 | 521 | MobiDBLite | consensus disorder prediction | 482 | 500 | - | - | |
Tan09g1784 | 521 | SMART | G9a_1 | 264 | 421 | IPR003105 | - | |
Tan09g1784 | 521 | Pfam | Zinc finger, C3HC4 type (RING finger) | 141 | 179 | IPR018957 | GO:0046872(InterPro) | |
Tan09g1784 | 521 | ProSitePatterns | Zinc finger PHD-type signature. | 15 | 60 | IPR019786 | - | |
Tan09g1784 | 521 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED | 3 | 509 | IPR045134 | GO:0010216(PANTHER)|GO:0016567(PANTHER)|GO:0061630(PANTHER) | |
Tan09g1784 | 521 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 88 | 207 | IPR013083 | - | |
Tan09g1784 | 521 | FunFam | E3 ubiquitin-protein ligase ORTHRUS 2 | 87 | 208 | - | - | |
Tan09g1784 | 521 | SUPERFAMILY | PUA domain-like | 243 | 437 | IPR015947 | - | |
Tan09g1784 | 521 | SMART | PHD_3 | 14 | 61 | IPR001965 | - | |
Tan09g1784 | 521 | ProSiteProfiles | Zinc finger PHD-type profile. | 12 | 63 | IPR019787 | - | |
Tan09g1784 | 521 | CDD | RING-HC_ORTHRUS_rpt1 | 137 | 184 | IPR047498 | - | |
Tan09g1784 | 521 | MobiDBLite | consensus disorder prediction | 469 | 500 | - | - | |
Tan09g1784 | 521 | Pfam | SAD/SRA domain | 271 | 420 | IPR003105 | - | |
Tan09g1784 | 521 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 13 | 62 | IPR013083 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan09g1784 | Tan-Chr9:69369748 | Tan09g2440 | Tan-Chr9:73956594 | 8.60E-287 | dispersed | |
Tan09g1783 | Tan-Chr9:69369748 | Tan09g1784 | Tan-Chr9:69369748 | 0.00E+00 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan09g1784 | K10638 | - | csv:101219001 | 946.806 |