Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g1789 ATGGCACGTCCATCTCCTCCGCCACCGCCACCGCCGCCGGGTACGAGCATGATCATGGTTCTGCTATTGATTTCTATGGAGGCCATTGTATCATGGGGTGCTTCTACCGACGGAGAAGCGCTTCTTAAGTTCAAAGGGTCTCTTGAAATGAGCAATACTAATGCGTTGGGGAATTGGGCGGCTGGGTCCTCCCCTTGCTCTGGCGACAAGGCGAATTGGGTCGGGATTCTTTGTGAGAAGGGAAATGTATGGGGATTGAAGCTTGAGAATATGGGGCTCAAGGGGACTATTGATATTGATTCTCTTGAAGGGGTTCCCCAATTAAGGACAATTAGTCTTATGAAGAATGATTTTGAAGGTTCTTTGCCTGATATTAAGAGACTTGGGGCATTGAAAACTCTGTATTTATCAGGAAACCAATTCTCAGGGAACATTCCTGGTGATAAATTTTCAAGCATGTTGTCTTTGAAGAAAGTTCATTTGGCACATAACCAATTTGAGGGACGGATTCCTTGGTCTTTAGTTGAGTTGCCTCGTTTGTTGGAGTTGAGGCTTGAAGGGAATAAGTTTTCTGGTCCAATTCCTAATTTTCAACAGAAGTCTTTGAAGGCCTTTAATGTCTCCAACAATGATCAACTTCATGGCCCAATCCCACATTCCCTTAGCCACATCGATCCATCCTCCTTTTCAGGCATTGAAGGTTTATGTGGACCGCCACTAAACAAACCATGCAGCACTTCAAACATGCCATCAATTGCCAGCATCATAATGGTTTCAATAGCTGTGACAGCGGCTCTACTTGCCATTGGTGCAGGTATAGTCATCCTTAGCCGTCGGAACCAATCATCTTCTAGTGAAGATGATCCAGCCCACGGCAAATCTCCATCTCCTAGTCATGATCAAGGACTTGGGTCGAAGTCACCGGACCGGGGTTCCAGCCATGGGAGCGGGTCTGGTAAACGGGTGGCCGAGAGTGCTAAGTTGTCATTTGTAAGAGAGGATTCAGAGAGGTTTGATTTATCAGACTTGCTTAAAGCCTCTGCAGAAATCCTGGGAAGTGGGTGCTTTGGTTCTTCTTACAAAGCAGCCTTGACCAATGGACCTGTCATGGTTGTGAAGAGATTCAAGCAAATGAACAATGTGGATAGAGAGGAATTCCAAGAACATATGAGGAGAATTGGAAGGTTGAAACACACCAATTTGCTTCCTCTTGTGGCCTACTACTACAAAAAGGAAGAAAAACTTCTCATTACCAACTATGTTGAGAAGGGTAGCTTGGCTGTTCAACTTCACGGGCACAAATCCGTGGGTCAACCAGCCCTGGATTGGCCTGCAAGGTTGAAGGTGATCAAGGGCATTGCAAAGGGTCTTCGCTATCTTTACGCTGAACTTCCAAGTCTCATAACCCCACATGGCCATCTCAAGTCCTCAAATGTCCTTCTCAAGGCCAATTACGAGCCCCTTCTTTCAGACTATGGCTTGATCCCAGTTGTGAACCAAGAGCATGCCCAAGAGCTAATGGTTGCCTACAAATCCCCCGAGTACTCCCAACAAGGTCGCATCACAAAGAAGACAGACGTGTGGAGCTTTGGGCAGTTGATCTTGGAGATTCTAACTGGGAAATTCCCAGCCTACTTTCTGAATCAGAGCAAGGGTGGCGACGAGGAAGATTTGGCGACTTGGGTCAAATCTATTCCTGAAAAAGAATGGAACAGCCAAGTGTTTGATAAGGACATGGGGCCAACCAAGAGCAGTGATGGTGAGATTATGAAGCTACTGAGGATTGCATTAGCGTGTTGTGAGAGCGACTTCGAGAAGAGGATGGATTTGCGAGAGGTTGCGGAGAAGATTGAGGAGTTGAAAGAAAAAGATGGAGATGAAGATTTCTATTCTTCATATGCGAGTGAAGCTGATATAAGATCTTCAAGAGGGTTATCTGATGAACTCAATTTCACCATATGA 1962 45.82 MARPSPPPPPPPPGTSMIMVLLLISMEAIVSWGASTDGEALLKFKGSLEMSNTNALGNWAAGSSPCSGDKANWVGILCEKGNVWGLKLENMGLKGTIDIDSLEGVPQLRTISLMKNDFEGSLPDIKRLGALKTLYLSGNQFSGNIPGDKFSSMLSLKKVHLAHNQFEGRIPWSLVELPRLLELRLEGNKFSGPIPNFQQKSLKAFNVSNNDQLHGPIPHSLSHIDPSSFSGIEGLCGPPLNKPCSTSNMPSIASIIMVSIAVTAALLAIGAGIVILSRRNQSSSSEDDPAHGKSPSPSHDQGLGSKSPDRGSSHGSGSGKRVAESAKLSFVREDSERFDLSDLLKASAEILGSGCFGSSYKAALTNGPVMVVKRFKQMNNVDREEFQEHMRRIGRLKHTNLLPLVAYYYKKEEKLLITNYVEKGSLAVQLHGHKSVGQPALDWPARLKVIKGIAKGLRYLYAELPSLITPHGHLKSSNVLLKANYEPLLSDYGLIPVVNQEHAQELMVAYKSPEYSQQGRITKKTDVWSFGQLILEILTGKFPAYFLNQSKGGDEEDLATWVKSIPEKEWNSQVFDKDMGPTKSSDGEIMKLLRIALACCESDFEKRMDLREVAEKIEELKEKDGDEDFYSSYASEADIRSSRGLSDELNFTI 653
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 69389262 69392175 + Tan0003672.1 Tan09g1789 764132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g1789 653 SUPERFAMILY Protein kinase-like (PK-like) 349 618 IPR011009 -
Tan09g1789 653 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 36 622 IPR046959 -
Tan09g1789 653 Gene3D Transferase(Phosphotransferase) domain 1 421 639 - -
Tan09g1789 653 Pfam Leucine rich repeat N-terminal domain 35 78 IPR013210 -
Tan09g1789 653 MobiDBLite consensus disorder prediction 282 326 - -
Tan09g1789 653 FunFam Pollen receptor-like kinase 1 421 631 - -
Tan09g1789 653 Gene3D Ribonuclease Inhibitor 152 245 IPR032675 -
Tan09g1789 653 SUPERFAMILY L domain-like 36 224 - -
Tan09g1789 653 Gene3D Ribonuclease Inhibitor 36 151 IPR032675 -
Tan09g1789 653 FunFam pollen receptor-like kinase 1 314 420 - -
Tan09g1789 653 Gene3D Phosphorylase Kinase; domain 1 313 420 - -
Tan09g1789 653 Pfam Protein tyrosine and serine/threonine kinase 349 616 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan09g1789 653 ProSiteProfiles Protein kinase domain profile. 345 630 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g1789 653 FunFam Nuclear pore complex protein NUP107 34 196 - -
Tan09g1789 653 Pfam Leucine rich repeat 131 190 IPR001611 GO:0005515(InterPro)
Tan09g1789 653 MobiDBLite consensus disorder prediction 298 314 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0502 Tan-Chr1:4625147 Tan09g1789 Tan-Chr9:69389262 7.20E-78 dispersed
Tan01g3754 Tan-Chr1:102340132 Tan09g1789 Tan-Chr9:69389262 8.00E-135 dispersed
Tan04g2901 Tan-Chr4:88302151 Tan09g1789 Tan-Chr9:69389262 1.50E-139 dispersed
Tan08g0006 Tan-Chr8:298990 Tan09g1789 Tan-Chr9:69389262 3.90E-106 dispersed
Tan09g1789 Tan-Chr9:69389262 Tan11g1423 Tan-Chr11:12810938 6.30E-61 dispersed
Tan09g1789 Tan-Chr9:69389262 Tan02g2602 Tan-Chr2:94651665 9.50E-134 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68081 PF07714 PK_Tyr_Ser-Thr 2.80E-30 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g1789 K28077 - csv:101213261 1041.18