Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g1812 ATGAGAAGGTCTTCCTCTATCGCTTCCTCCTTTCGCTCAATCTGCACCTATCATGGCACCCTTTCCGCCTCCGCCACCTCCAATCATCGTCTTCTCCAAGCCGCCCTCTTCAGTTCCGCCACCGCTGGCGGTTCCCATACCCATCGGCGGTGGTTCTCATCTGTCCTCGATTCCGTCGCCGGTGGCTCTACCCGAGCTGCCTCGTTCGGCGTGGTTGGGGCTGTTGCTTCTCTAGCCGCTGCTGTTTCCATGTCCCAGGAGGTTTATGCGAAGGAGCCCTTGCGGCAGGAGTTGGTTCCCAAGGAAGTTGTGCTCTATCAATACGAAGCGTGCCCGTTTTGTAATAAAGTTAAAGCTTTTCTTGACTACTACGATATACCATACAAAGTTGTTGAGGTCAATCCATTTAGTAAAAAAGAAATTAAATGGTCGGAATATAAGAAGGTGCCAATATTGGTGGTTGATGGTGAACAGCTGGTTGACTCCTCAGCCATTATCGACCAGTTGAGCCACAAGGTTTTGTCAGATAAGAATGCTTATTCTGTCTCTGAAGACGATGAAGAGACAAAATGGCGACAATGGGTAGATAATCACTTGGTACATGTCTTATCACCAAACATATATCGAAATACTTCCGAAGCCCTTGAGTCATTTGACTACATTGCTAGCAATGGTATGGTCAAACCGTGGATTATTTTCTGA 702 47.58 MRRSSSIASSFRSICTYHGTLSASATSNHRLLQAALFSSATAGGSHTHRRWFSSVLDSVAGGSTRAASFGVVGAVASLAAAVSMSQEVYAKEPLRQELVPKEVVLYQYEACPFCNKVKAFLDYYDIPYKVVEVNPFSKKEIKWSEYKKVPILVVDGEQLVDSSAIIDQLSHKVLSDKNAYSVSEDDEETKWRQWVDNHLVHVLSPNIYRNTSEALESFDYIASNGMVKPWIIF 233
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 69557506 69561753 + Tan0001124.2 Tan09g1812 764155

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g1812 233 SFLD Glutathione Transferase (cytosolic) 30 229 IPR040079 -
Tan09g1812 233 Gene3D - 181 232 - -
Tan09g1812 233 SUPERFAMILY Thioredoxin-like 102 197 IPR036249 -
Tan09g1812 233 PANTHER MICROSOMAL PROSTAGLANDIN E SYNTHASE-2 19 230 - GO:0005739(PANTHER)|GO:0050220(PANTHER)
Tan09g1812 233 Pfam Glutathione S-transferase, N-terminal domain 105 172 IPR004045 -
Tan09g1812 233 ProSitePatterns Glutaredoxin active site. 105 121 IPR011767 -
Tan09g1812 233 Gene3D Glutaredoxin 94 176 - -
Tan09g1812 233 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 101 177 IPR004045 -
Tan09g1812 233 SFLD Prostaglandin E synthase like.1 30 229 IPR034334 GO:0050220(InterPro)
Tan09g1812 233 ProSiteProfiles Glutaredoxin domain profile. 91 189 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g1812 K05309 - - csv:101221439 343.584
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g1811 Tan-Chr9:69557506 Tan09g1812 Tan-Chr9:69557506 4.70E-121 tandem
Tan09g1812 Tan-Chr9:69557506 Tan09g1813 Tan-Chr9:69557506 1.90E-121 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g197 . . Bda06g00822 Bda15g00512 Bpe12g00695 . . Bma12g01245 . . Cma10g00331 Cma11g00316 Car10g00313 Car11g00291 . . Cpe04g01366 Bhi02g00150 Tan09g1812 . . Hepe09g0396 . . Cla06g01416 Cam06g1569 Cec06g1629 Cco06g1621 Clacu06g1531 Cmu06g1485 Cre06g2294 . . . Cone19ag0335 . . . . Blo13g00171 Blo15g00058 . . Bpe07g01049 . . Bma08g00057 . Cmo10g00357 . . . . . . . . . . . . . . . . . . . . . Lsi06g01278 Csa01g00439 Chy02g02306 Cme02g01677
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001449 3 2 2 3 3 2 4 2 2 2 2 2 4 2 2 3 2 2 3 2 2 2 2 2 2 2 2 3 4 2 72