Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g1817 ATGGCGGATACACCATCGTCGCCGAAGAGCGGTTGCCGGTTGGCGCTAATGGAGAATCTGCTCGGACTTCTCCGTGTTCGCATCATTCGTGGTGTCAATCTTGCTGTTCGTGATGTTCGCAGCAGCGATCCTTATGTAGTCGTCAAGATGGGAAAACAAAAATTGAAGACTCGGGTGATAAAGAAGGATGTCAATCCTGCATGGAATGAAGATCTAACTCTTTCTGTCAGTGACCCGAATCTTCCCATCAAGCTGACTGTTTACGATCACGACACGTTTAGCAAGGACGATAAAATGGGATATGCTGAGTTTGATATCAAATCATTTATGGATGCTCTGAAGATGAACTTGAAAAATCTTCCCAGTGGAACGACAATCTCACGAATGCTACCGGGCAGGCAAAACTGTCTTGCTGAAGAGAGCTGTGTCGTATGGAAAGATGGTAAAGTTATCCAAGATATCTACCTTAGATTGAAAAACGTCGAATGCGGGGAAGTCGAAATTCAGTTGCAGTGGATTGATCTTCCAAACCCCAAAGGCTAA 543 44.94 MADTPSSPKSGCRLALMENLLGLLRVRIIRGVNLAVRDVRSSDPYVVVKMGKQKLKTRVIKKDVNPAWNEDLTLSVSDPNLPIKLTVYDHDTFSKDDKMGYAEFDIKSFMDALKMNLKNLPSGTTISRMLPGRQNCLAEESCVVWKDGKVIQDIYLRLKNVECGEVEIQLQWIDLPNPKG 180
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 69593688 69596504 + Tan0008016.1 Tan09g1817 764160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g1817 180 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 17 178 IPR044562 -
Tan09g1817 180 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 22 166 IPR035892 -
Tan09g1817 180 CDD C2_ArfGAP 21 164 - -
Tan09g1817 180 ProSiteProfiles C2 domain profile. 8 119 IPR000008 -
Tan09g1817 180 SMART C2_3c 23 118 IPR000008 -
Tan09g1817 180 Gene3D C2 domain 18 179 IPR035892 -
Tan09g1817 180 Pfam C2 domain 22 110 IPR000008 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g2082 Tan-Chr4:75077650 Tan09g1817 Tan-Chr9:69593688 1.30E-66 dispersed
Tan09g1817 Tan-Chr9:69593688 Tan11g1746 Tan-Chr11:17730282 9.20E-55 dispersed
Tan04g1551 Tan-Chr4:23410357 Tan09g1817 Tan-Chr9:69593688 9.80E-51 transposed
Tan05g2189 Tan-Chr5:72792891 Tan09g1817 Tan-Chr9:69593688 1.80E-72 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g1817 - - - 0.0