Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g1833 ATGGGGAGTGGAACTCTCGTGGACGGTGTTCGTCGCTGGTTTCAACGTCGCACTACTACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCAATTCTAATTTTGTTCGTAATTCTGATTCTGATTCTAATCCTAATTACCCTAATATTCATAAGCTCGATTATGTTGATAATGGCGAAAATGGTAACCCATTGTTGAGTAGTGATTTACGCGTCCAATCGTCCATTCCCCACAAACGCAAACCTCTACGGAAACAACCCCATCTCGGAGGAGAAGGGATTCTTCAACAATTACCTGAGGAGGAGGAGGACGACGACGACGACCTTGATTACTCTGCCTTGAAGCTCATTAAAGTTCCTAAGCGGACCAATCACGTTAGAGCTCCTCCTCCTCCTCCTGCTGCTGCTTTAATGGACTCCCACAAGAAGGGTGGGTTGGAAACAGAATTTTTCACAGAGTATGGAGAGGCCAGCAGATATCAGGTTCAAGAAATAATTGGTAAAGGAAGCTATGGGGTTGTTGGTTCTGCCATTGATACCCATACTGATGAGAAGGTCGCAATCAAGAAAATTAATGATGTGTTTGAGCATGTTTCTGATGCCACAAGAATTTTAAGAGAAATTAAACTCCTACGGTTGCTGCGTCATCCGGATATAGTAGAAATAAAGCACATTATGCTTCCTCCTTCACGGAGAGAATTCAGAGATATTTATGTTGTTTTTGAATTGATGGAATCTGATCTTCACCAAGTAATTAAGGCCAACGATGATCTCACTCCTGAGCACCATCAATTTTTCTTGTACCAGCTTCTACGTGGTCTGAAATATATACATACAGCAAATGTATTTCATCGTGATTTAAAGCCCAAGAACATTTTAGCTAATGCCGACTGCAAACTGAAAATATGTGATTTTGGACTTGCTCGTGTATCATTTAATGATGCTCCGTCTGCTATTTTCTGGACTGACTATGTTGCGACTCGGTGGTATCGTGCTCCTGAACTTTGTGGCTCTTTTTTCTCCAAATACACTCCTGCAATTGATATTTGGAGCATTGGATGCATATTTGCGGAAATGCTCACGGGAAAGCCACTGTTTCCTGGGAAAAATGTGGTGCACCAATTGGATCTCATGACTGATGTGCTTGGCACACCTTCTGCTGAGTCCATTGCTAGGATTCGAAATGAAAAGGCAAGAAGATACCTTAGTAACATGAGGAGAAAGCAGCCTGTTCCTCTCACACAAAAATTCCCCAATGCTGATCCCTTGGCTCTCCGCTTGCTTCAACGCCTGCTTGCATTTGATCCCAAAGACCGTCCTACAGCTGAAGAGGCATTAGCTGATCCTTACTTTCATGGGTTGGCCAACGTGGATCGGGAACCATCAACTCAACCAATTTCAAAACTTGAGTTTGAATTTGAGAGAAGAAAGTTGACAAAAGATGATGTTAGAGAATTAATTTATCGAGAGATCTTGGAGTATCATCCTCAGATGCTGCAGGAATATCTCCGCAGTGGAGAACAAACTAGCTTCATGTACCCAAGTGGTGTTGATCGCTTCAAACGCCAGTTTGCGCATCTGGAGGAACATTATGGTAAGGGTGAAAGAAGTACTCCACTTCAAAGACAGCATGCTTCATTGCCCAGGGAAAGGGTTTGTGCACCCAAAGATGAGGTTGCACAGCACAATGATTTAGAAGGAAGAAACGGTGCATATGTTGCTACATCTCTTCAGAGTCCCCCAAGGTCTCAGCAAGGTGATGGTTTGGAAAATGCGAACAGTAACGAACAAAATGGACAAAACAAGCCAAATTACAGTGCTCGTAGCTTGTTGAAGAGTGCCAGCATCAGTGCCTCTAAATGTATAGGTGTTAAACCAAAAAAAGACCTTGAGGAGGAACCGATTACGGAGACCAATGACGAGGCAGTTGACGGGTTGTCTCATAAGGTTTCAGCCTTGCATACTTGA 1965 43.1 MGSGTLVDGVRRWFQRRTTTSSSSSSSSSSNSNFVRNSDSDSNPNYPNIHKLDYVDNGENGNPLLSSDLRVQSSIPHKRKPLRKQPHLGGEGILQQLPEEEEDDDDDLDYSALKLIKVPKRTNHVRAPPPPPAAALMDSHKKGGLETEFFTEYGEASRYQVQEIIGKGSYGVVGSAIDTHTDEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFRDIYVVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDVLGTPSAESIARIRNEKARRYLSNMRRKQPVPLTQKFPNADPLALRLLQRLLAFDPKDRPTAEEALADPYFHGLANVDREPSTQPISKLEFEFERRKLTKDDVRELIYREILEYHPQMLQEYLRSGEQTSFMYPSGVDRFKRQFAHLEEHYGKGERSTPLQRQHASLPRERVCAPKDEVAQHNDLEGRNGAYVATSLQSPPRSQQGDGLENANSNEQNGQNKPNYSARSLLKSASISASKCIGVKPKKDLEEEPITETNDEAVDGLSHKVSALHT 654
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 69723447 69729965 + Tan0005591.2 Tan09g1833 764176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g1833 654 ProSitePatterns MAP kinase signature. 194 297 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g1833 654 MobiDBLite consensus disorder prediction 14 47 - -
Tan09g1833 654 CDD STKc_TDY_MAPK 158 495 - -
Tan09g1833 654 MobiDBLite consensus disorder prediction 529 555 - -
Tan09g1833 654 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 156 491 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Tan09g1833 654 MobiDBLite consensus disorder prediction 623 654 - -
Tan09g1833 654 ProSitePatterns Protein kinases ATP-binding region signature. 165 189 IPR017441 GO:0005524(InterPro)
Tan09g1833 654 Gene3D Phosphorylase Kinase; domain 1 175 496 - -
Tan09g1833 654 MobiDBLite consensus disorder prediction 575 604 - -
Tan09g1833 654 Pfam Protein kinase domain 159 450 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g1833 654 FunFam Mitogen-activated protein kinase 474 496 - -
Tan09g1833 654 ProSiteProfiles Protein kinase domain profile. 159 450 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g1833 654 SUPERFAMILY Protein kinase-like (PK-like) 155 455 IPR011009 -
Tan09g1833 654 FunFam Mitogen-activated protein kinase 148 253 - -
Tan09g1833 654 SMART serkin_6 159 450 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g1833 654 Gene3D Transferase(Phosphotransferase) domain 1 245 473 - -
Tan09g1833 654 MobiDBLite consensus disorder prediction 1 67 - -
Tan09g1833 654 FunFam Mitogen-activated protein kinase 245 473 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g1833 Tan-Chr9:69723447 Tan04g0685 Tan-Chr4:5949937 2.40E-44 dispersed
Tan09g1832 Tan-Chr9:69723447 Tan09g1833 Tan-Chr9:69723447 0.00E+00 tandem
Tan09g1833 Tan-Chr9:69723447 Tan09g1834 Tan-Chr9:69723447 5.00E-300 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68087 PF00069 Pkinase 2.00E-68 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g1833 - - - 0.0