Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g1834 ATGCCGGAAAGATTGAGCAGTAGACTTTTGGATTGTAAGGCAATGAGAAATGATTGTTGTTTGAAACTTTGTCTTCCGGGTGGGTTGGAAACAGAATTTTTCACAGAGTATGGAGAGGCCAGCAGATATCAGGTTCAAGAAATAATTGGTAAAGGAAGCTATGGGGTTGTTGGTTCTGCCATTGATACCCATACTGATGAGAAGGTCGCAATCAAGAAAATTAATGATGTGTTTGAGCATGTTTCTGATGCCACAAGAATTTTAAGAGAAATTAAACTCCTACGGTTGCTGCGTCATCCGGATATAGTAGAAATAAAGCACATTATGCTTCCTCCTTCACGGAGAGAATTCAGAGATATTTATGTTGTTTTTGAATTGATGGAATCTGATCTTCACCAAGTAATTAAGGCCAACGATGATCTCACTCCTGAGCACCATCAATTTTTCTTGTACCAGCTTCTACGTGGTCTGAAATATATACATACAGCAAATGTATTTCATCGTGATTTAAAGCCCAAGAACATTTTAGCTAATGCCGACTGCAAACTGAAAATATGTGATTTTGGACTTGCTCGTGTATCATTTAATGATGCTCCGTCTGCTATTTTCTGGACTGACTATGTTGCGACTCGGTGGTATCGTGCTCCTGAACTTTGTGGCTCTTTTTTCTCCAAATACACTCCTGCAATTGATATTTGGAGCATTGGATGCATATTTGCGGAAATGCTCACGGGAAAGCCACTGTTTCCTGGGAAAAATGTGGTGCACCAATTGGATCTCATGACTGATGTGCTTGGCACACCTTCTGCTGAGTCCATTGCTAGGATTCGAAATGAAAAGGCAAGAAGATACCTTAGTAACATGAGGAGAAAGCAGCCTGTTCCTCTCACACAAAAATTCCCCAATGCTGATCCCTTGGCTCTCCGCTTGCTTCAACGCCTGCTTGCATTTGATCCCAAAGACCGTCCTACAGCTGAAGAGGCATTAGCTGATCCTTACTTTCATGGGTTGGCCAACGTGGATCGGGAACCATCAACTCAACCAATTTCAAAACTTGAGTTTGAATTTGAGAGAAGAAAGTTGACAAAAGATGATGTTAGAGAATTAATTTATCGAGAGATCTTGGAGTATCATCCTCAGATGCTGCAGGAATATCTCCGCAGTGGAGAACAAACTAGCTTCATGTACCCAAGTGGTGTTGATCGCTTCAAACGCCAGTTTGCGCATCTGGAGGAACATTATGGTAAGGGTGAAAGAAGTACTCCACTTCAAAGACAGCATGCTTCATTGCCCAGGGAAAGGGTTTGTGCACCCAAAGATGAGGTTGCACAGCACAATGATTTAGAAGGAAGAAACGGTGCATATGTTGCTACATCTCTTCAGAGTCCCCCAAGGTCTCAGCAAGGTGATGGTTTGGAAAATGCGAACAGTAACGAACAAAATGGACAAAACAAGCCAAATTACAGTGCTCGTAGCTTGTTGAAGAGTGCCAGCATCAGTGCCTCTAAATGTATAGGTGTTAAACCAAAAAAAGACCTTGAGGAGGAACCGATTACGGAGACCAATGACGAGGCAGTTGACGGGTTGTCTCATAAGGTTTCAGCCTTGCATACTTGA 1617 42.36 MPERLSSRLLDCKAMRNDCCLKLCLPGGLETEFFTEYGEASRYQVQEIIGKGSYGVVGSAIDTHTDEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFRDIYVVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDVLGTPSAESIARIRNEKARRYLSNMRRKQPVPLTQKFPNADPLALRLLQRLLAFDPKDRPTAEEALADPYFHGLANVDREPSTQPISKLEFEFERRKLTKDDVRELIYREILEYHPQMLQEYLRSGEQTSFMYPSGVDRFKRQFAHLEEHYGKGERSTPLQRQHASLPRERVCAPKDEVAQHNDLEGRNGAYVATSLQSPPRSQQGDGLENANSNEQNGQNKPNYSARSLLKSASISASKCIGVKPKKDLEEEPITETNDEAVDGLSHKVSALHT 538
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 69723447 69729965 + Tan0005591.3 Tan09g1834 764177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g1834 538 Gene3D Transferase(Phosphotransferase) domain 1 129 357 - -
Tan09g1834 538 SUPERFAMILY Protein kinase-like (PK-like) 39 339 IPR011009 -
Tan09g1834 538 FunFam Mitogen-activated protein kinase 32 137 - -
Tan09g1834 538 ProSitePatterns MAP kinase signature. 78 181 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g1834 538 MobiDBLite consensus disorder prediction 507 538 - -
Tan09g1834 538 FunFam Mitogen-activated protein kinase 129 357 - -
Tan09g1834 538 CDD STKc_TDY_MAPK 42 379 - -
Tan09g1834 538 FunFam Mitogen-activated protein kinase 358 380 - -
Tan09g1834 538 MobiDBLite consensus disorder prediction 459 488 - -
Tan09g1834 538 Gene3D Phosphorylase Kinase; domain 1 59 380 - -
Tan09g1834 538 ProSiteProfiles Protein kinase domain profile. 43 334 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g1834 538 Pfam Protein kinase domain 43 334 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g1834 538 MobiDBLite consensus disorder prediction 413 439 - -
Tan09g1834 538 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 40 375 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Tan09g1834 538 SMART serkin_6 43 334 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g1834 538 ProSitePatterns Protein kinases ATP-binding region signature. 49 73 IPR017441 GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g1832 Tan-Chr9:69723447 Tan09g1834 Tan-Chr9:69723447 5.00E-300 dispersed
Tan09g1834 Tan-Chr9:69723447 Tan07g0613 Tan-Chr7:9661317 3.10E-45 dispersed
Tan09g1833 Tan-Chr9:69723447 Tan09g1834 Tan-Chr9:69723447 5.00E-300 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68088 PF00069 Pkinase 1.20E-68 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g1834 - - - 0.0