Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g1837 ATGGCTGGTAGTGATCAAGATATGGCTGTTCACTCTCTTGGTTCTAATGTTTCTTTAGTTTCAGATCATGAACCTGAAAAATGTGGCAATGCCAATCACCAACAAAGACCTTGCTTCGATCCTTCTTCTCTTGTTTCTCCCAAGGCTGTGCCGCCGATTTCGGTGGCGGCGGAGAACGATCAAGCTCTCCGTCGTCCTCGGGGCCGACCTGCAGGGTCCAAGAACAAGCCGAAACCCCCTATTATTGTTACTCGAGATAGCGCCAATGCTCTTCGGGCTCATGCCATTGAGGTTAGCTCTGGTTGCGATGTCAATGAGAGTCTCTCTAACTTTGCTCGGAGGAAGCAACGCGGCGTTTGCATTCTTAGTGGGAGTGGGTGTGTCACTAATGTCACGCTTCGCCAGGCTGCCTCTTCTGGCGCTATTGTCACTCTCCATGGCCGCTTTGAGATTCTTTCATTGTTGGGATCGATCTTGCCACCGCCAGCACCGTCGGGGATCACCGGTCTAACAATTTACTTGGCCGGTGCACAGGGGCAGGTGGTCGGCGGAGTGGTGGTGGGTGCGCTCATTGCTTCCGGCCCTGTCGTGATCATGGCGGCGACGTTCATGAACGCGACATTCGACCGCCTGCCTTCAGACGATGACGAGGTTGCGCCCACCATGCAGAGCCAACACTACGGCCAAAATGGGCGGAGCCACCACCACCTGGATGTTTCAGATCTATATGGAGTGCCACAGAACTTGATCACCAACAGCACTCTTCCGCCGGAGTTATACTCTTGGGCGGCGGCGGGCAGAACCATGTCGAAGACTTAA 819 54.21 MAGSDQDMAVHSLGSNVSLVSDHEPEKCGNANHQQRPCFDPSSLVSPKAVPPISVAAENDQALRRPRGRPAGSKNKPKPPIIVTRDSANALRAHAIEVSSGCDVNESLSNFARRKQRGVCILSGSGCVTNVTLRQAASSGAIVTLHGRFEILSLLGSILPPPAPSGITGLTIYLAGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDDEVAPTMQSQHYGQNGRSHHHLDVSDLYGVPQNLITNSTLPPELYSWAAAGRTMSKT 272
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 69736639 69737668 + Tan0002156.1 Tan09g1837 764180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g1837 272 CDD DUF296 92 174 IPR005175 -
Tan09g1837 272 FunFam AT-hook motif nuclear-localized protein 91 218 - -
Tan09g1837 272 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 58 233 IPR014476 GO:0003680(InterPro)|GO:0003680(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)
Tan09g1837 272 Pfam Plants and Prokaryotes Conserved (PCC) domain 92 204 IPR005175 -
Tan09g1837 272 MobiDBLite consensus disorder prediction 1 81 - -
Tan09g1837 272 Gene3D - 91 226 - -
Tan09g1837 272 ProSiteProfiles PPC domain profile profile. 88 225 IPR005175 -
Tan09g1837 272 SUPERFAMILY AF0104/ALDC/Ptd012-like 88 218 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g1837 Tan-Chr9:69736639 Tan10g0419 Tan-Chr10:3375213 1.40E-57 dispersed
Tan09g1837 Tan-Chr9:69736639 Tan07g1754 Tan-Chr7:69092337 4.80E-63 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g1837 - - - 0.0