Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan09g1842 | ATGTCTCGCCGCAGCCACGACGACGGCGGTGACGAGAAGCTTTCCGCCGGCGAGGAAGACGATGAAGACGATGCCATTGATGACATGGAAGTCCTTCGGGGAGCCTGTAGGCTTGCTGGAGTTAATCCTGAGGAGTATATTAATCATCCGTCGTCGTCGCTTGCCGCCGGAGATGATTCCGATGAAGTAGATGATTTCGAACTTGTTCGGAATATTCGGAAGCAGTTCTCGATTGCGGACGATGAGCAGCCGTTGAGTATTCTCCCACCGGCGTCTCCGGACGAGGAGGAAGACGATTTCGAGACGCTTCGTCGGATTCAGCGGCGCTTTGGGGCGTATGAAACTGATATCTTGAGCAATAAACCCAATCAATCTTGTGACTTTGATGTGCCTCTGGAGATGGATTCTAACAACACAGCTATTGAGAGACAGACATACCCAGAGAGGTCATCTATGCTAGCCTTTGAAAAGGGAAGCTTGCCAAAGGCTGGATTGGCATTTATTGATGCCATCAAGAAGAATAGGTCCCAGCAGAAGTTTATTCGCAGTAAGATGATTCACCTTGAAGCTAGAATTGAGGAGACCAAAAAGCTCAGAAAACATTTCAAAATTCTCAAAGATTTCCAAGGTTCATGTAGAAGAAGAACAAGTTGTGCACTGTCTCAAACGATAGATCCTCGAGTTCAGTTAATATCAGCTGGAAAACCACAGGCTAAGGATTCATCAAAGAAGGACAAACGATTGTCTGCAATGTATTATGGCCCAGCTGAGAATTCTCATGTTGCATACTACAAAATGGCATTGACAAAGTTTCCACCTTCCGTAGATCGAAAAAGATGGTCCAATGTAGAAAGGGAGAATCTAGGGAAGGGAATACGACAACAATTTCAAGAGATGGTGCTTCAGATCTCGGTGGATCAAATTAGTGGGCTACAAGGATTTTTAGCAGATTCAGATGATCTGGATAACATTCTTGCATCAATAAAAGACCTTGACATTACTCCCGAAAAGATTAGGGAATTTTTGCCAAAAGTTAATTGGGACAAATTGGCTTCCATGTATCTTCGGGGTCGCTCAGGGGCAGAATGTGAAGCAAGGTGGTTGAATTTTGAAGATCCCCTAATTAATCGGAATGCATGGACTACAAGTGAGGATAAGAATCTTTTGTTTACTATTCAACAGAAAGGGTTGAATAACTGGATTGACATAGCAGTTTCATTGGGTACAAACAGAACTCCTTTTCAGTGCTTGTCTCGGTATCAAAGGAGTTTAAACGCATCCATATTAAAGAGGGAGTGGACCAAAGATGAGGATGAGAAACTTCAATCTGCTGTTGCTATTCTTGGTGTGGGAGATTGGCAGGCTGTAGCTTCTACTTTAGAAGGACGAACTGGTCCACAGTGCTCTAATAGGTGGAAAAAATCCCTCGACCCAGCTAGGACAAAAAGAGGCTACTTCACCCCAGATGAAGACAGTCGCTTGAAAATTGCTGTACTGCTTTTTGGGCCTAAAAATTGGAACAAGAAAGCCGAATTTTTACCTGGTCGAAATCAAGTTCAATGCAGAGAAAGATGGTTCAATTGCTTAGATCCTTCCTTGAGAAGATGTAAATGGACAGAAGAGGAGGATTTAAGGCTAGAGATAGCAATTCAGGAACATGGATATAGCTGGGCTAAGGTAGCTGCATGTGTGCCGTCACGTACAGATAATGAGTGCCGGAGGAGATGGAAGAAGTTGTTTCCCAATGAAGTTCCTTTGCTCCAGGAAGCTAGAAAGATTCAGAAGGCTGCTCTTATTAGCAACTTTGTTGATAGGGAATCAGAGCGTCCTGCTCTTGGTCCTACTGACTTTCGACCTATACCAAATACAAATTTATTATGTAATACTGATGATCCAAAACCTGCCCCGAAAAGAAATGTGAAAACGAGAAGGATGCCAGTGTCAAGGAAAAATGAAAAGAGTGCTACTGGTGATGCTGATGCTCCTAAGAAGAGGAAATCAAATAACCGGAGGAATCAAGCTGATGCAACTGCTCAGGGCGGTATTGCAAATAATGTCCCAGAGGAGATTAAATCTATAAAACCTCAAAGAAAACGAAATAGGCATGGAGCTTATACTCCTAAGAGGAAAGGGGTTCTGGAGCTAAGTTCTAACAGTGAAAGATGTGCTGAACAGAATTTGGACACTCGGAGCCTCGAGGTGCAGCTGAATGGTAAGGAATCCGAGATGACCAACAATGACTGTGCCGAGGCTGTTGATGAGAATGGTATGGAAGTATGTGAGAACAATGTTGCAGAGAAGCTTTCTAAAAGAGATGTATGCTGTTCAGAACAAGAAGGAAATCAGAACTCTACAGGATCTTCTGGAGTGTCGGTGTTGTCGGAAATGACTAATGACACGGACGAGTACAATCCCTTTATCCTTCCAGATACAGCACTGCTGGCTAGTAGTACTGCTGGGGATGATATTATGGTGAGGAATGGGGAGAGTGTTGCAGACAAAGATCTGGATGACAGTAACAGCTTCTCGTTACCGCTCAATTGCTTAGAACTCAGGACAACTGACAGTGAAGGTGTCAACAGTTATTCTGTTGGTGAAATTACAGACAAAGACGATAACATTTGCAAGCCCCAAGGCAGAAGGAAGAAAAATAGTAAAGGATCAAATGAGAGTCAGGGTTCTTTGGTGGTTTCTGGTCAACAAGGGGAGCTGGAGAGGTCGGGGACGAAGTCCCCTCGTCGTCATAATCAATCAAAGAAGAGAAAGCATAACACTATAAATACGAGTTCATTAGGAACACTGGAGGCAGTTGAAGAGGTCGATGACTGCACTCTCCTTGGCTTTCTGCAAAAAAGATTGAAGAGAACAACCACTCATGAAAAGAAAGTTGATAGCACTCTCCTAGAAGTTGATAATGATCCTACTATTGCCTCGCTCCTCGAGGGTAAATTGAAGAGAAAAAAGCATCTAGCGCCTAGTGGTGGAGGTTAA | 2991 | 43.7 | MSRRSHDDGGDEKLSAGEEDDEDDAIDDMEVLRGACRLAGVNPEEYINHPSSSLAAGDDSDEVDDFELVRNIRKQFSIADDEQPLSILPPASPDEEEDDFETLRRIQRRFGAYETDILSNKPNQSCDFDVPLEMDSNNTAIERQTYPERSSMLAFEKGSLPKAGLAFIDAIKKNRSQQKFIRSKMIHLEARIEETKKLRKHFKILKDFQGSCRRRTSCALSQTIDPRVQLISAGKPQAKDSSKKDKRLSAMYYGPAENSHVAYYKMALTKFPPSVDRKRWSNVERENLGKGIRQQFQEMVLQISVDQISGLQGFLADSDDLDNILASIKDLDITPEKIREFLPKVNWDKLASMYLRGRSGAECEARWLNFEDPLINRNAWTTSEDKNLLFTIQQKGLNNWIDIAVSLGTNRTPFQCLSRYQRSLNASILKREWTKDEDEKLQSAVAILGVGDWQAVASTLEGRTGPQCSNRWKKSLDPARTKRGYFTPDEDSRLKIAVLLFGPKNWNKKAEFLPGRNQVQCRERWFNCLDPSLRRCKWTEEEDLRLEIAIQEHGYSWAKVAACVPSRTDNECRRRWKKLFPNEVPLLQEARKIQKAALISNFVDRESERPALGPTDFRPIPNTNLLCNTDDPKPAPKRNVKTRRMPVSRKNEKSATGDADAPKKRKSNNRRNQADATAQGGIANNVPEEIKSIKPQRKRNRHGAYTPKRKGVLELSSNSERCAEQNLDTRSLEVQLNGKESEMTNNDCAEAVDENGMEVCENNVAEKLSKRDVCCSEQEGNQNSTGSSGVSVLSEMTNDTDEYNPFILPDTALLASSTAGDDIMVRNGESVADKDLDDSNSFSLPLNCLELRTTDSEGVNSYSVGEITDKDDNICKPQGRRKKNSKGSNESQGSLVVSGQQGELERSGTKSPRRHNQSKKRKHNTINTSSLGTLEAVEEVDDCTLLGFLQKRLKRTTTHEKKVDSTLLEVDNDPTIASLLEGKLKRKKHLAPSGGG | 996 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 69769891 | 69782949 | + | Tan0015669.1 | Tan09g1842 | 764185 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan09g1842 | 996 | MobiDBLite | consensus disorder prediction | 861 | 927 | - | - | |
Tan09g1842 | 996 | Gene3D | - | 374 | 424 | - | - | |
Tan09g1842 | 996 | MobiDBLite | consensus disorder prediction | 14 | 28 | - | - | |
Tan09g1842 | 996 | MobiDBLite | consensus disorder prediction | 608 | 725 | - | - | |
Tan09g1842 | 996 | ProSiteProfiles | Myb-like domain profile. | 372 | 424 | IPR001005 | - | |
Tan09g1842 | 996 | CDD | SANT | 486 | 527 | IPR001005 | - | |
Tan09g1842 | 996 | SUPERFAMILY | Homeodomain-like | 353 | 420 | IPR009057 | - | |
Tan09g1842 | 996 | ProSiteProfiles | Myb-like domain profile. | 425 | 476 | IPR001005 | - | |
Tan09g1842 | 996 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 530 | 584 | IPR017930 | - | |
Tan09g1842 | 996 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 482 | 529 | IPR017930 | - | |
Tan09g1842 | 996 | ProSiteProfiles | Myb-like domain profile. | 530 | 580 | IPR001005 | - | |
Tan09g1842 | 996 | SMART | sant | 276 | 373 | IPR001005 | - | |
Tan09g1842 | 996 | SMART | sant | 482 | 531 | IPR001005 | - | |
Tan09g1842 | 996 | SMART | sant | 534 | 582 | IPR001005 | - | |
Tan09g1842 | 996 | SMART | sant | 376 | 426 | IPR001005 | - | |
Tan09g1842 | 996 | SMART | sant | 429 | 478 | IPR001005 | - | |
Tan09g1842 | 996 | CDD | SANT | 432 | 476 | IPR001005 | - | |
Tan09g1842 | 996 | Gene3D | - | 537 | 583 | - | - | |
Tan09g1842 | 996 | ProSiteProfiles | Myb-like domain profile. | 478 | 529 | IPR001005 | - | |
Tan09g1842 | 996 | Gene3D | - | 479 | 534 | - | - | |
Tan09g1842 | 996 | Gene3D | - | 429 | 478 | - | - | |
Tan09g1842 | 996 | MobiDBLite | consensus disorder prediction | 888 | 906 | - | - | |
Tan09g1842 | 996 | CDD | SANT | 537 | 580 | IPR001005 | - | |
Tan09g1842 | 996 | MobiDBLite | consensus disorder prediction | 869 | 887 | - | - | |
Tan09g1842 | 996 | Pfam | Myb-like DNA-binding domain | 483 | 529 | IPR001005 | - | |
Tan09g1842 | 996 | Pfam | Myb-like DNA-binding domain | 377 | 422 | IPR001005 | - | |
Tan09g1842 | 996 | Pfam | Myb-like DNA-binding domain | 430 | 474 | IPR001005 | - | |
Tan09g1842 | 996 | Pfam | Myb-like DNA-binding domain | 535 | 579 | IPR001005 | - | |
Tan09g1842 | 996 | SUPERFAMILY | Homeodomain-like | 480 | 576 | IPR009057 | - | |
Tan09g1842 | 996 | MobiDBLite | consensus disorder prediction | 645 | 671 | - | - | |
Tan09g1842 | 996 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - | |
Tan09g1842 | 996 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 425 | 480 | IPR017930 | - | |
Tan09g1842 | 996 | PANTHER | SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 4 | 12 | 959 | IPR051575 | GO:0000978(PANTHER)|GO:0001006(PANTHER)|GO:0019185(PANTHER)|GO:0042795(PANTHER)|GO:0042796(PANTHER) | |
Tan09g1842 | 996 | SUPERFAMILY | Homeodomain-like | 409 | 480 | IPR009057 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan09g0484 | Tan-Chr9:45481686 | Tan09g1842 | Tan-Chr9:69769891 | 5.80E-11 | dispersed | |
Tan09g1842 | Tan-Chr9:69769891 | Tan11g1045 | Tan-Chr11:8236373 | 2.30E-09 | dispersed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
28378 | PF00249 | Myb_DNA-binding | 9.60E-09 | CL0123 | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan09g1842 | K09422 | - | csv:101216287 | 1457.58 |