Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g1858 ATGGCAAAGGGAAAACTTGTCTCTGAGAAAATTAAGCTCATTCTTGCCTTGATTGCTTTGCAGTTCTGCTATGCAGGATTTCACATTGTGTCAAGAGTTGCTTTAAACATTGGTGTTAGTAAAGTCGTATATCCACTGTATCGAAATGCTATCGCTTTAGCTCTGTTGAGTCCTTTCGCTTATTTTCTAGAGAAGAATGAAAGACCACCTCTTACTTTGTCTTTGCTGTTTCAGTTCTTTCTTCTAGCTTTACTGGGAATAACTGCAAATCAAGGATTCTATCTCTTGGGGCTAAACTATGCATCTCCAACTTTTGCTTCTGCAATGCAAAACTCAGTTCCTGCAATTACCTTTGTGATGGCTTCTGTTCTGAGGCTTGAGCAAGTCAACTTCAAAAGGAGAGATGGTTTGGCAAAGCTTTTGGGAACCATTGGGAGTGTTGGAGGAGCAACTGTGATCACTCTCTATAGAGGCCCTCCACTGCTTCACAACAACTATCTAACTCAAGGAAGTAGCATCTTAGAGATGGATGACCCTACAATTAAAGTGCAGAATTGGAGATGGGGTTGCATATACCTGCTAGGCCACTGTCTATCTTGGGCTGGTTGGATGGTTTTTCAGGCTTCTGTGTTGAAAAAGTATCCAGCAAAGCTAACAATAACTTCATACACATGCTTCTTTGGACTGATCCAATTCCTAGTCATAGCTGGCTTTGTGGAAACAGACTATCAGTACTGGAAAATCCAATCTGCAGAAGAACTCTTCACAATCATATATGCTGGTGTTGTAGCCTCTGGCATTGTCATATCTCTCCAAACTTGGTGCATTCACAAAAGTGATCCTGTTTTTGTTGCTGTCTTCCAGCCTCTCCAAACTTTCCTAGTAGCCATCATGGCGTTTCTCATCCTCGGCGACCGGTTATTCTCCGGCGGGGTTATTGGAGCTGTTCTTATAACACTTGGGCTCTACTTAGTTTTGTGGGGCAAGAGTGAAGAAAAGGCATTGGAAGAACAAGACAAGTCTTTGAAACAGCCCCTTTTGGATGATCAAAAAGGGGACAAAGAAGAGAATGTTGTTTCAGACATACCATGA 1092 42.12 MAKGKLVSEKIKLILALIALQFCYAGFHIVSRVALNIGVSKVVYPLYRNAIALALLSPFAYFLEKNERPPLTLSLLFQFFLLALLGITANQGFYLLGLNYASPTFASAMQNSVPAITFVMASVLRLEQVNFKRRDGLAKLLGTIGSVGGATVITLYRGPPLLHNNYLTQGSSILEMDDPTIKVQNWRWGCIYLLGHCLSWAGWMVFQASVLKKYPAKLTITSYTCFFGLIQFLVIAGFVETDYQYWKIQSAEELFTIIYAGVVASGIVISLQTWCIHKSDPVFVAVFQPLQTFLVAIMAFLILGDRLFSGGVIGAVLITLGLYLVLWGKSEEKALEEQDKSLKQPLLDDQKGDKEENVVSDIP 363
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 69866110 69868458 - Tan0016339.1 Tan09g1858 764201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g1858 363 Pfam EamA-like transporter family 188 326 IPR000620 GO:0016020(InterPro)
Tan09g1858 363 Pfam EamA-like transporter family 13 133 IPR000620 GO:0016020(InterPro)
Tan09g1858 363 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 156 - -
Tan09g1858 363 MobiDBLite consensus disorder prediction 344 363 - -
Tan09g1858 363 PANTHER WAT1-RELATED PROTEIN 16 339 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Tan09g1858 363 SUPERFAMILY Multidrug resistance efflux transporter EmrE 241 330 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g4066 Tan-Chr1:105582941 Tan09g1858 Tan-Chr9:69866110 3.10E-58 dispersed
Tan01g4975 Tan-Chr1:115531171 Tan09g1858 Tan-Chr9:69866110 1.60E-104 dispersed
Tan09g1858 Tan-Chr9:69866110 Tan11g1295 Tan-Chr11:11026334 1.20E-58 dispersed
Tan09g1858 Tan-Chr9:69866110 Tan02g2023 Tan-Chr2:89481846 2.00E-112 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g1858 - - - 0.0