Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g1859 ATGACCGATAGCGCTAAATCAGTTCTCGAAGAGGAGACTTCGAAGCTTGAAACCAAGTCCAAGCGCGGCGCAGATGTCGAAGATGCTGTTGTTACTGTGAAGAAGTTTAAAACAGAAGCTTCCGCCGATGTAGCCAATGAAACTGGAGACTGTACCGGCAGAAAGTTGGAAGCTGTTAATGGTGGTGAAGAAAATAAGATCATCAGGAGGGGAGTTGAGTTTGAAATTGAAGCGGATGCGGCGGAGGATAAAGGGTCCAGGCATACAATGGAGGATGCCTGGGTTTTGCTCTTGGATGCGAGCTTGGATTATCCTGCGAAATTGAGATGTGCACATTTTGCTATCTATGATGGACATGGGGGCCGGTTAGCTGCCGAGTATGCTCAAAAGCATTTGCATATGAATGTTCTCTCGGCTGGGTTACCACGTGAGTTGTTGGATGTAAAAGCAACTAAAAAGGCAATACTTGATGGGTTCCGAAAAACTGATGAGTCTCTTCTTCAAGAAAGTTCTGCAGGGGGGTGGCAGGATGGTGCTACTGCTGTTTGCGTTTGGGTATTAGGTCAAACGGTTTTTGTTGCTAATGTTGGTGATGCTAAAGCAGTTGTAGCCCGATCATTGACTGCTGATAAATCGTTGAATAATCCTAATGGTGGAAACTCTTTAAAGGCTATTGTTTTGACAAGGGAGCATAAGGCAATCTACCCACAAGAGAGAACTCGCATTCAAAAGGCTGGTGGTGTTGTTAGTTCAAATGGTCGACTTCAGGGACGTCTTGAAGTTTCTCGGGCATTTGGAGATCGTCAATTTAAAAAGTTGGGCGTTATTGCAACTCCAGACATTCATTCTTTCGAATTGACTGATAGGGAGCATTTTATCATTCTCGGATGTGATGGACTTTGGGGGGTTTTTGGACCAAACGATGCTGTCGATTTTGTCCAGAAATTATTGAAGGAGGGCTTGCCCATAACATCAGTAAGTCGACGTCTTGTGAGGGAAGCTATTCGTGAACGACGCTGTAAAGATAACTGTACTGCAATGGTTATTGTCTTCAGGCCCAAATGA 1065 44.69 MTDSAKSVLEEETSKLETKSKRGADVEDAVVTVKKFKTEASADVANETGDCTGRKLEAVNGGEENKIIRRGVEFEIEADAAEDKGSRHTMEDAWVLLLDASLDYPAKLRCAHFAIYDGHGGRLAAEYAQKHLHMNVLSAGLPRELLDVKATKKAILDGFRKTDESLLQESSAGGWQDGATAVCVWVLGQTVFVANVGDAKAVVARSLTADKSLNNPNGGNSLKAIVLTREHKAIYPQERTRIQKAGGVVSSNGRLQGRLEVSRAFGDRQFKKLGVIATPDIHSFELTDREHFIILGCDGLWGVFGPNDAVDFVQKLLKEGLPITSVSRRLVREAIRERRCKDNCTAMVIVFRPK 354
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 69870193 69879249 - Tan0003890.1 Tan09g1859 764202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g1859 354 CDD PP2Cc 81 351 IPR001932 -
Tan09g1859 354 Gene3D - 60 352 IPR036457 -
Tan09g1859 354 Pfam Protein phosphatase 2C 82 339 IPR001932 -
Tan09g1859 354 SMART PP2C_4 59 349 IPR001932 -
Tan09g1859 354 ProSiteProfiles PPM-type phosphatase domain profile. 77 351 IPR001932 -
Tan09g1859 354 PANTHER PROTEIN PHOSPHATASE 2C 60 351 IPR015655 GO:0004722(InterPro)|GO:0006470(PANTHER)|GO:0006470(InterPro)
Tan09g1859 354 FunFam Probable protein phosphatase 2C 67 64 353 - -
Tan09g1859 354 SUPERFAMILY PP2C-like 75 352 IPR036457 -
Tan09g1859 354 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g1859 Tan-Chr9:69870193 Tan09g1860 Tan-Chr9:69871786 1.50E-133 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g1859 K17500 - csv:101216467 602.053