Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g1860 ATGACCGATAGCGCTAAATCAGTTCTCGAAGAGGAGACTTCGAAGCTTGAAACCAAGTCCAAGCGCGGCGCAGATGTCGAAGATGCTGTTGTTACTGTGAAGAAGTTTAAAACAGAAGCTTCCGCCGATGTAGCCAATGAAACTGGAGACTGTACCGGCAGAAAGTTGGAAGCTGTTAATGGTGGTGAAGAAAATAAGATCATCAGGAGGGGAGTTGAGTTTGAAATTGAAGCGGATGCGGCGGAGGATAAAGGGTCCAGGCATACAATGGAGGATGCCTGGGTTTTGCTCTTGGATGCGAGCTTGGATTATCCTGCGAAATTGAGATGTGCACATTTTGCTATCTATGATGGACATGGGGGCCGGTTAGCTGCCGAGTATGCTCAAAAGCATTTGCATATGAATGTTCTCTCGGCTGGGTTACCACGTGAGTTGTTGGATGTAAAAGCAACTAAAAAGGCAATACTTGATGGGTTCCGAAAAACTGATGAGTCTCTTCTTCAAGAAAGTTCTGCAGGGGGGTGGCAGGATGGTGCTACTGCTGTTTGCGTTTGGGTATTAGGTCAAACGGTTTTTGTTGCTAATGTTGGTGATGCTAAAGCAGTTGTAGCCCGATCATTGACTGCTGATAAATCGTTGAATAATCCTAATGGTGGAAACTCTTTAAAGGCTATTGTTTTGACAAGGGAGCATAAGGCAATCTACCCACAAGAGAGAACTCGCATTCAAAAGGTAAGAACTATGAAGATGGAATATATGTCTTGTTAG 768 44.53 MTDSAKSVLEEETSKLETKSKRGADVEDAVVTVKKFKTEASADVANETGDCTGRKLEAVNGGEENKIIRRGVEFEIEADAAEDKGSRHTMEDAWVLLLDASLDYPAKLRCAHFAIYDGHGGRLAAEYAQKHLHMNVLSAGLPRELLDVKATKKAILDGFRKTDESLLQESSAGGWQDGATAVCVWVLGQTVFVANVGDAKAVVARSLTADKSLNNPNGGNSLKAIVLTREHKAIYPQERTRIQKVRTMKMEYMSC 255
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 69871786 69879249 - Tan0003890.2 Tan09g1860 764203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g1860 255 ProSiteProfiles PPM-type phosphatase domain profile. 77 255 IPR001932 -
Tan09g1860 255 SMART PP2C_4 59 250 IPR001932 -
Tan09g1860 255 Gene3D - 60 250 IPR036457 -
Tan09g1860 255 Pfam Protein phosphatase 2C 82 244 IPR001932 -
Tan09g1860 255 SUPERFAMILY PP2C-like 75 245 IPR036457 -
Tan09g1860 255 CDD PP2Cc 81 244 IPR001932 -
Tan09g1860 255 PANTHER PROTEIN PHOSPHATASE 78 245 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Tan09g1860 255 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g1860 Tan-Chr9:69871786 Tan01g0142 Tan-Chr1:1319155 7.30E-13 dispersed
Tan09g1859 Tan-Chr9:69870193 Tan09g1860 Tan-Chr9:69871786 1.50E-133 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g1860 K17500 - csv:101216467 400.979