Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g1879 ATGAAGACCTTTCTCCGCCCGACTCATTTTCAGACCGCCGCCGCACTTTTCACGTTCGCCGCTACCTTCCTCCTCCGCTTCCCGCCGTCTCTCGCCGACGACGATACCGAAGTATGCTATAGGCTCAGTCCGGCGTTACCGTGTTCTCCTCCTCCGCCCCCGTCTGGCAATGGGAGAGACATCAGAACGAAGATTATCATTGGCACATCCACTGGTTTAGGAGGCTTGCTTTTAACCTTAATTGTTCTATGCATTTGCTACCGATGGCGCCAGCTTCGTCGTAGAAGGTCTCACACGGTGCCGTTTGTGCAGCGAAGCATTCCCTCGAACCCCTCAAATCCGTCGGATCCCCCTTCTGTGGAAGAACTTGAGAAGGGAGGTTCCTACTTGGGCGTTCAACTCTTCTCATATAAAGAACTTGAAGAAGCCACCAACCATTTTGACTCCAACAAAGAGCTTGGAGATGGAGGTTTTGGCACAGTGTATTATGGCTTACTCAAAGATGGGCGTGCCGTTGCTGTCAAACGGTTGTTTGAAAGCAATTTTAAGAGAGTTGAGCAGTTCATGAACGAGGTGGAGATCCTTGCCCGCCTGCGCCATCGCAACCTTGTTTCACTTTACGGTTGCACCTCACGCAATAGCCGCGAGCTTCTGCTTGTGTACGAATATGTACCGAATGGCACAGTGGCCGATCATCTCCATGGCAAACTTGCAAAGCCTGGCAAACTTCCATGGTCTACAAGAATGAAGATTGCTATAGAGACTGCAAATGCCTTGGTGTATCTCCATGCTTCTGAAATCATCCACCGTGATGTCAAAACCAACAACATTCTCCTTGACAACAACTTTTGTGTTAAAGTAGCCGATTTTGGGTTGTCTCGTCTCTTCCCGCTTGATGTCACACACGTTTCAACCGCTCCACAAGGCACTCCTGGGTATGTCGATCCAGAGTACCATCAGTGCTACCAACTCTCTGATAAAAGCGATGTCTTCAGCTTTGGTGTGGTACTAGTTGAACTCATATCCTCAATGCCTGCTGTTGACATCACAAGGCACAGACAAGAGATCAATCTATTCAACATGGCCATCAACAAGATCCAAAGCCACGCATTGCATGAACTCGTTGACCCTTCACTCGGTTTCGAATCGGATTACAAGATCCAAGACATGATAACCAGCGTTGCTGAGTTGGCATTTCGATGCCTGCAGAGCATGAAAGATGAGAGGCCGACCATGATAGAAGTTCTTGACACTCTGAACATCATACAGAAACAGAACACCGAGAAAGGTAACGATCAAGACACCAACATTTCTGCCAAGGACGACGCTGTGCTGCTGAAGAATGGCTATGGATCTTCTCCAAGCTCCCTGTCTGTATCTTGGGTTAGCAGTAACACCTCCACAGCAACTAATGAAACCGTCAGCGCCTAA 1431 48.71 MKTFLRPTHFQTAAALFTFAATFLLRFPPSLADDDTEVCYRLSPALPCSPPPPPSGNGRDIRTKIIIGTSTGLGGLLLTLIVLCICYRWRQLRRRRSHTVPFVQRSIPSNPSNPSDPPSVEELEKGGSYLGVQLFSYKELEEATNHFDSNKELGDGGFGTVYYGLLKDGRAVAVKRLFESNFKRVEQFMNEVEILARLRHRNLVSLYGCTSRNSRELLLVYEYVPNGTVADHLHGKLAKPGKLPWSTRMKIAIETANALVYLHASEIIHRDVKTNNILLDNNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLSDKSDVFSFGVVLVELISSMPAVDITRHRQEINLFNMAINKIQSHALHELVDPSLGFESDYKIQDMITSVAELAFRCLQSMKDERPTMIEVLDTLNIIQKQNTEKGNDQDTNISAKDDAVLLKNGYGSSPSSLSVSWVSSNTSTATNETVSA 476
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 70010256 70016745 + Tan0017869.2 Tan09g1879 764222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g1879 476 Gene3D Transferase(Phosphotransferase) domain 1 224 446 - -
Tan09g1879 476 Gene3D Phosphorylase Kinase; domain 1 121 223 - -
Tan09g1879 476 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 62 466 IPR044652 GO:0004672(InterPro)|GO:0016301(PANTHER)|GO:0016310(PANTHER)
Tan09g1879 476 SMART serkin_6 147 422 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g1879 476 ProSitePatterns Serine/Threonine protein kinases active-site signature. 267 279 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan09g1879 476 FunFam Wall-associated receptor kinase-like 20 224 432 - -
Tan09g1879 476 Pfam Protein kinase domain 149 417 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g1879 476 ProSiteProfiles Protein kinase domain profile. 147 422 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g1879 476 ProSitePatterns Protein kinases ATP-binding region signature. 153 175 IPR017441 GO:0005524(InterPro)
Tan09g1879 476 SUPERFAMILY Protein kinase-like (PK-like) 128 421 IPR011009 -
Tan09g1879 476 FunFam WAK1-OsWAK receptor-like cytoplasmic kinase (OsWAK-RLCK) 120 223 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g1879 Tan-Chr9:70010256 Tan11g0102 Tan-Chr11:1099104 1.90E-123 dispersed
Tan09g1879 Tan-Chr9:70010256 Tan09g1880 Tan-Chr9:70013523 1.30E-236 tandem
Tan04g0822 Tan-Chr4:6988704 Tan09g1879 Tan-Chr9:70010256 8.20E-124 wgd
Tan05g2236 Tan-Chr5:73305477 Tan09g1879 Tan-Chr9:70010256 5.60E-145 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68091 PF00069 Pkinase 4.20E-48 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g1879 - - - 0.0