Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan09g1896 | ATGGATCCTCCTCATCACTTCAAGCCTTCTTTCTCCTTCCCTGATTTCATCGATTCTAATTTCGACCTAATTTCTGCTTCCAACCCAGTTGTTTTAGACAACCCACCTCTCAATTTCACTAACTTTTTCCCCTTTTCCAATGACTTGTTTTCACCTCATAACCAAAACCAAAACCCACCAGAATTATTTCCTCACAATTTGGGAGATAGCCAGATTTTGCAGCAACCTCCTCCCACTCCTAATCCCCCACTTTCTTCTCAATTTCATCACATGAAGATCAAGAGAAAATCCATGGATCTTTCACAAACCAGCTCTGGGATTTCCACTCCTCAAGTTTCTGAAACTGCCTTCTTCAACACAAAAAATAGCTCAGGAAAAGGGAAGAGATTGAAAACTATTGAGAAAGAAGAAGATAAATCAACTAGAGAAGTGGTTCATGTCAGAGCTAGAAGAGGCCAAGCCACTGATAGCCATAGTTTAGCTGAAAGGGTGAGAAGAGGAAAGATCAATGAAAGACTAAGATGCTTGAAAGACATTGTCCCAGGATGCTACAAGACCATGGGCATGGCTGTCATGTTGGATGAGATAATTAATTATGTCCAGTCTCTGCAGAATCAAGTGGAGTTTCTATCCATGAAACTAGCAGCAGCTAGTTCTTTTTATGACTTCAATTCGGAGGCAGATGTCATATCAAAATTACAGAGGGCAAAGGCACATGAAGCAAAAGAATTAGAGAGATTGATGAGAGAAGGATATGGAGGAGTAGCTTGCTTCCACTCAACTTTGCCTCTTTGA | 795 | 40.75 | MDPPHHFKPSFSFPDFIDSNFDLISASNPVVLDNPPLNFTNFFPFSNDLFSPHNQNQNPPELFPHNLGDSQILQQPPPTPNPPLSSQFHHMKIKRKSMDLSQTSSGISTPQVSETAFFNTKNSSGKGKRLKTIEKEEDKSTREVVHVRARRGQATDSHSLAERVRRGKINERLRCLKDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSMKLAAASSFYDFNSEADVISKLQRAKAHEAKELERLMREGYGGVACFHSTLPL | 264 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 70106179 | 70107818 | + | Tan0002380.1 | Tan09g1896 | 764239 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan09g1896 | 264 | FunFam | transcription factor BEE 3-like | 150 | 221 | - | - | |
Tan09g1896 | 264 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 153 | 203 | IPR011598 | GO:0046983(InterPro) | |
Tan09g1896 | 264 | MobiDBLite | consensus disorder prediction | 50 | 74 | - | - | |
Tan09g1896 | 264 | PANTHER | STEROL REGULATORY ELEMENT-BINDING PROTEIN | 102 | 239 | IPR024097 | GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(InterPro) | |
Tan09g1896 | 264 | SMART | finulus | 159 | 209 | IPR011598 | GO:0046983(InterPro) | |
Tan09g1896 | 264 | CDD | bHLH_AtBPE_like | 143 | 228 | - | - | |
Tan09g1896 | 264 | Pfam | Helix-loop-helix DNA-binding domain | 157 | 204 | IPR011598 | GO:0046983(InterPro) | |
Tan09g1896 | 264 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 151 | 221 | IPR036638 | GO:0046983(InterPro) | |
Tan09g1896 | 264 | Coils | Coil | 230 | 250 | - | - | |
Tan09g1896 | 264 | MobiDBLite | consensus disorder prediction | 50 | 87 | - | - | |
Tan09g1896 | 264 | Gene3D | - | 149 | 221 | IPR036638 | GO:0046983(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan05g2268 | Tan-Chr5:73960172 | Tan09g1896 | Tan-Chr9:70106179 | 4.70E-34 | dispersed | |
Tan09g1896 | Tan-Chr9:70106179 | Tan11g1640 | Tan-Chr11:15877923 | 2.60E-29 | dispersed | |
Tan04g2023 | Tan-Chr4:72351644 | Tan09g1896 | Tan-Chr9:70106179 | 9.60E-34 | transposed | |
Tan05g2267 | Tan-Chr5:73960172 | Tan09g1896 | Tan-Chr9:70106179 | 2.70E-58 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
28380 | PF00010 | HLH | 4.50E-05 | No_clan | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan09g1896 | - | - | - | 0.0 |