Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g1917 ATGCGTATGAGCTGTAATGGATGCCGAGTTCTTCGCAAAGGCTGCAGTGAAAGCTGCTCGATCCGACCCTGTCTTCAATGGATCAAAAGCCCCCAATCCCAAGCCAACGCCACCTTCTTCCTCGCCAAATTCTACGGCCGCGCAGGCCTCGTTAACCTCATCAATGCCGGCCCCGACCATCTCCGCCCTGCGATTTTTAAATCTTTGCTATTCGAGGCGTGTGGGCGGATTGTGAATCCCATTTTCGGGTCCGCCGGATTGTTGTGGTCCGGGAGCTGGCAGCTGTGTCAGGACGCCGTCGAAGCCGTTCTGAAAGGCGCGCCGATTCTGCCGGTTTCTTCCGAGACGGCAGCGTCGCACATGGGCCCACCGTTAAAGGGCTGCGACATCCGCCACGTGTCCAAACAGCAAGGCTCCGCCGCCGGTTCCGCGCTCCGGAAGATCAAGACGCGGCGGCGGTTCAAGCGATCGGCAACGGTGGCAAACAAGCCGAAGCCGAAGGAGGAGCCGGTGGTGGTGACCGAGTTCATATTCGAAGACCCGACCCGAGTTTCATCGGAGCCCCGGTGTTTGAAGTTCGAGTTGGATAATTGGGTGAGCCATGAGTCGCCGGAGAAGGACTGCGGCAGCGACGAGGCCGAGTGCTTGTCGGTGGAGACTGTGGAGGCTTCTTGGGTGGGCCAGGGTGGTGACGTAGAGTTGGAACTTACCTTAGGGTTTGGGCACAGTCGGATGCTGACGTGA 744 59.14 MRMSCNGCRVLRKGCSESCSIRPCLQWIKSPQSQANATFFLAKFYGRAGLVNLINAGPDHLRPAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAPILPVSSETAASHMGPPLKGCDIRHVSKQQGSAAGSALRKIKTRRRFKRSATVANKPKPKEEPVVVTEFIFEDPTRVSSEPRCLKFELDNWVSHESPEKDCGSDEAECLSVETVEASWVGQGGDVELELTLGFGHSRMLT 247
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 70201078 70202390 + Tan0012683.1 Tan09g1917 764260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g1917 247 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 240 - GO:0010468(PANTHER)
Tan09g1917 247 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Tan09g1917 247 Pfam Lateral organ boundaries (LOB) domain 4 102 IPR004883 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g2009 Tan-Chr4:71656633 Tan09g1917 Tan-Chr9:70201078 8.30E-72 transposed
Tan04g0849 Tan-Chr4:7300669 Tan09g1917 Tan-Chr9:70201078 6.20E-53 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28382 PF03195 LOB 6.30E-22 No_clan Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g1917 - - - 0.0