Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan09g1917 | ATGCGTATGAGCTGTAATGGATGCCGAGTTCTTCGCAAAGGCTGCAGTGAAAGCTGCTCGATCCGACCCTGTCTTCAATGGATCAAAAGCCCCCAATCCCAAGCCAACGCCACCTTCTTCCTCGCCAAATTCTACGGCCGCGCAGGCCTCGTTAACCTCATCAATGCCGGCCCCGACCATCTCCGCCCTGCGATTTTTAAATCTTTGCTATTCGAGGCGTGTGGGCGGATTGTGAATCCCATTTTCGGGTCCGCCGGATTGTTGTGGTCCGGGAGCTGGCAGCTGTGTCAGGACGCCGTCGAAGCCGTTCTGAAAGGCGCGCCGATTCTGCCGGTTTCTTCCGAGACGGCAGCGTCGCACATGGGCCCACCGTTAAAGGGCTGCGACATCCGCCACGTGTCCAAACAGCAAGGCTCCGCCGCCGGTTCCGCGCTCCGGAAGATCAAGACGCGGCGGCGGTTCAAGCGATCGGCAACGGTGGCAAACAAGCCGAAGCCGAAGGAGGAGCCGGTGGTGGTGACCGAGTTCATATTCGAAGACCCGACCCGAGTTTCATCGGAGCCCCGGTGTTTGAAGTTCGAGTTGGATAATTGGGTGAGCCATGAGTCGCCGGAGAAGGACTGCGGCAGCGACGAGGCCGAGTGCTTGTCGGTGGAGACTGTGGAGGCTTCTTGGGTGGGCCAGGGTGGTGACGTAGAGTTGGAACTTACCTTAGGGTTTGGGCACAGTCGGATGCTGACGTGA | 744 | 59.14 | MRMSCNGCRVLRKGCSESCSIRPCLQWIKSPQSQANATFFLAKFYGRAGLVNLINAGPDHLRPAIFKSLLFEACGRIVNPIFGSAGLLWSGSWQLCQDAVEAVLKGAPILPVSSETAASHMGPPLKGCDIRHVSKQQGSAAGSALRKIKTRRRFKRSATVANKPKPKEEPVVVTEFIFEDPTRVSSEPRCLKFELDNWVSHESPEKDCGSDEAECLSVETVEASWVGQGGDVELELTLGFGHSRMLT | 247 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 70201078 | 70202390 | + | Tan0012683.1 | Tan09g1917 | 764260 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan09g1917 | 247 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 38 | 1 | 240 | - | GO:0010468(PANTHER) | |
Tan09g1917 | 247 | ProSiteProfiles | LOB domain profile. | 3 | 109 | IPR004883 | - | |
Tan09g1917 | 247 | Pfam | Lateral organ boundaries (LOB) domain | 4 | 102 | IPR004883 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan04g2009 | Tan-Chr4:71656633 | Tan09g1917 | Tan-Chr9:70201078 | 8.30E-72 | transposed | |
Tan04g0849 | Tan-Chr4:7300669 | Tan09g1917 | Tan-Chr9:70201078 | 6.20E-53 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
28382 | PF03195 | LOB | 6.30E-22 | No_clan | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan09g1917 | - | - | - | 0.0 |