Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan09g1952 | ATGGATGCTCGCCGCGCCTCCCGCGTCGTCATCGATCCCAAAGTCCGGCAGGTCGGCTTCTTCACCCCCGATGCCCCGCACTCTCCGGGTCCGACCCTTCCCGCTCCGCCCGACTGCACCACTTCACCGCTCTCCGACTCTCCGACCAGCAATTCTTTGTCTCCGGTAATGATTCCGCCTCCACGTCATCCTTCCGACAACCTATCCTCCCGGACGGCTGTTCTGCCGGTTCCGGCATCGGGAAATTGGAGGCACCCTGAGGACCTTGTCCCTGTAGGGAGCCACAATCCCTCAGAAATGCTTATCGGATCGTCGTCGCCTTCGAGTCGAATTGCAGGTGAAGAGTTGGAGTTCTCAGAGGATTCGTCGGCCTCCGTCTTGCTTCGGCGGAGTGGTTCGGGGAAGTTAGCCTCTAGCTGTCCCGGCGTCGGATTCCACACGGCGGCTAAGCCGGCGGATAATTTGCAGACAATGCCTGCCAATAGTGTGAGGACATTGGGAACTAACAAGCCTGCTGGAGCGACAGAAAAGATGGGAGGAGCATCCGCAGAGGCCAAAGATCATATTCCAAGTTCGAAACCCTTGAAGGCAAAAACTACAAAGGCTGAAAGACGGGCTTTACAGGAGGCTCAACGAGCTGCAAAAGTTTCTGCAAAAGGTGAGGCAAATAAGTCAGGTACTGCCTCTGGGGCAACAGCTGGTAAAGTTGGGAAACAGCCTCCAACAGTTAAAGGTGGTCCTGCCACACCTTCAGTTGCATCTGCTGACAATAGAGGAGGTGATCGTATTGTTGATAAAGAAAGGAAGAAAGATGCTCCCCCTCCACGTATGCAATTTGATGATAAACATCGGGTAGAAAGGGCTAAAAAGCGGGCTGTGTTTAGTCAAACTGAAGCAAGAAATAGAGTTGAATTATTCCGCCATTTGCCACAATATGAGCAGGGGACTCAGCTTCCTGATCTTGTGTCAAAGTTTTTCCAACTTGATACCATTCATCCTGCCATATACAAGGTTGGTTTACAATACATGGCTGGAGATATATGTGGCGGTAATGCTCGTTGTATTGCAATGCTCCATGCATTTCAGCAAGCCATTAAAGACTACTCAACTCCGCCTCAGAAATCTCTCGTCAGAGATTTAACTGCAAAAATTGGTGTCTATGTGTCATTCTTTAATGAATGCAGGCCACTGTCTGTTAGCATGGGTAATGCAATCAGATTTTTAAAAAATCGCATTGCCAAATTACCACCAAGTATTCTAGAATCTGAGGCAAAAGCTACACTTACCTTAGATATCAGTCGTTTTATCAATGAGAAGATAATGCTTGCTGACGAGGTCATAGTTAGACACGCTGCTACCAAGATCAGGGATGGAGACGTTCTTCTCACATATGGATCATCATGTGTAGTAGAGATGCTTCTATTGTATGCCCACGATCTTGGGAAACAATTTCGTGTTGTGGTGGTAGATTCTCGACCAAAACTTGAGGGCCAAGCATTGCTGCGTAGGCTGATAGCAAAGGGCCTAAGTTGTACTTACACTCATATAAATGCTATTTCGTATGTGATGCGTGAAGTAAACCGAGTTTTTCTGGGTGCTGCTGCTGTATTAGCCAATGGCACTGTATATTCAAGAGTGGGGACTGCAGGTATTGCCATGGTTGCAGATGCATTCCATGTTCCAGTATTATTCTGCTGTGAAGCGTATAAGTTTCATGAAAGGGTACAACTGGATTCAATATGCTTTAATGAATTAGGTGACCCAGACGCTATCTCAAAGGTTTCAGGAAGGACTGACATCAATTATTTAGATAATTTGACTTCTAAAGAACATTTGCAACTTCTAAATTTAATGTATGATGCTACACCTTCAGATTACATCTCAATGATTGTCACAGATTATGGCATGGTAAGTCTGAGCGTGTCTCTCTCTCTGCGTGCATGCACGTATCTTCTGGTTATTTATTTACTTGATAGTCCAAAAACGTATGAAAAAAAAGGAGAAGGGAATAAGGACCTCTTGGAAAGACACGACAGGTATTACATTGATATAGGGGCTTGTACCATTAATTAG | 2073 | 46.21 | MDARRASRVVIDPKVRQVGFFTPDAPHSPGPTLPAPPDCTTSPLSDSPTSNSLSPVMIPPPRHPSDNLSSRTAVLPVPASGNWRHPEDLVPVGSHNPSEMLIGSSSPSSRIAGEELEFSEDSSASVLLRRSGSGKLASSCPGVGFHTAAKPADNLQTMPANSVRTLGTNKPAGATEKMGGASAEAKDHIPSSKPLKAKTTKAERRALQEAQRAAKVSAKGEANKSGTASGATAGKVGKQPPTVKGGPATPSVASADNRGGDRIVDKERKKDAPPPRMQFDDKHRVERAKKRAVFSQTEARNRVELFRHLPQYEQGTQLPDLVSKFFQLDTIHPAIYKVGLQYMAGDICGGNARCIAMLHAFQQAIKDYSTPPQKSLVRDLTAKIGVYVSFFNECRPLSVSMGNAIRFLKNRIAKLPPSILESEAKATLTLDISRFINEKIMLADEVIVRHAATKIRDGDVLLTYGSSCVVEMLLLYAHDLGKQFRVVVVDSRPKLEGQALLRRLIAKGLSCTYTHINAISYVMREVNRVFLGAAAVLANGTVYSRVGTAGIAMVADAFHVPVLFCCEAYKFHERVQLDSICFNELGDPDAISKVSGRTDINYLDNLTSKEHLQLLNLMYDATPSDYISMIVTDYGMVSLSVSLSLRACTYLLVIYLLDSPKTYEKKGEGNKDLLERHDRYYIDIGACTIN | 690 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 70451935 | 70461861 | + | Tan0002310.2 | Tan09g1952 | 764295 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan09g1952 | 690 | Gene3D | - | 443 | 646 | IPR042529 | - | |
Tan09g1952 | 690 | MobiDBLite | consensus disorder prediction | 39 | 53 | - | - | |
Tan09g1952 | 690 | PANTHER | TRANSLATION INITIATION FACTOR EIF-2B | 47 | 641 | - | - | |
Tan09g1952 | 690 | Pfam | Initiation factor 2 subunit family | 349 | 637 | IPR000649 | GO:0044237(InterPro) | |
Tan09g1952 | 690 | MobiDBLite | consensus disorder prediction | 154 | 169 | - | - | |
Tan09g1952 | 690 | MobiDBLite | consensus disorder prediction | 259 | 286 | - | - | |
Tan09g1952 | 690 | SUPERFAMILY | NagB/RpiA/CoA transferase-like | 302 | 640 | IPR037171 | - | |
Tan09g1952 | 690 | MobiDBLite | consensus disorder prediction | 1 | 112 | - | - | |
Tan09g1952 | 690 | MobiDBLite | consensus disorder prediction | 148 | 286 | - | - | |
Tan09g1952 | 690 | MobiDBLite | consensus disorder prediction | 189 | 210 | - | - | |
Tan09g1952 | 690 | MobiDBLite | consensus disorder prediction | 98 | 112 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan09g1952 | Tan-Chr9:70451935 | Tan09g1954 | Tan-Chr9:70451935 | 3.80E-290 | dispersed | |
Tan09g1951 | Tan-Chr9:70451935 | Tan09g1952 | Tan-Chr9:70451935 | 0.00E+00 | tandem | |
Tan09g1952 | Tan-Chr9:70451935 | Tan09g1953 | Tan-Chr9:70451935 | 6.50E-258 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan09g1952 | K03680 | - | csv:101215104 | 945.651 |