Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g1952 ATGGATGCTCGCCGCGCCTCCCGCGTCGTCATCGATCCCAAAGTCCGGCAGGTCGGCTTCTTCACCCCCGATGCCCCGCACTCTCCGGGTCCGACCCTTCCCGCTCCGCCCGACTGCACCACTTCACCGCTCTCCGACTCTCCGACCAGCAATTCTTTGTCTCCGGTAATGATTCCGCCTCCACGTCATCCTTCCGACAACCTATCCTCCCGGACGGCTGTTCTGCCGGTTCCGGCATCGGGAAATTGGAGGCACCCTGAGGACCTTGTCCCTGTAGGGAGCCACAATCCCTCAGAAATGCTTATCGGATCGTCGTCGCCTTCGAGTCGAATTGCAGGTGAAGAGTTGGAGTTCTCAGAGGATTCGTCGGCCTCCGTCTTGCTTCGGCGGAGTGGTTCGGGGAAGTTAGCCTCTAGCTGTCCCGGCGTCGGATTCCACACGGCGGCTAAGCCGGCGGATAATTTGCAGACAATGCCTGCCAATAGTGTGAGGACATTGGGAACTAACAAGCCTGCTGGAGCGACAGAAAAGATGGGAGGAGCATCCGCAGAGGCCAAAGATCATATTCCAAGTTCGAAACCCTTGAAGGCAAAAACTACAAAGGCTGAAAGACGGGCTTTACAGGAGGCTCAACGAGCTGCAAAAGTTTCTGCAAAAGGTGAGGCAAATAAGTCAGGTACTGCCTCTGGGGCAACAGCTGGTAAAGTTGGGAAACAGCCTCCAACAGTTAAAGGTGGTCCTGCCACACCTTCAGTTGCATCTGCTGACAATAGAGGAGGTGATCGTATTGTTGATAAAGAAAGGAAGAAAGATGCTCCCCCTCCACGTATGCAATTTGATGATAAACATCGGGTAGAAAGGGCTAAAAAGCGGGCTGTGTTTAGTCAAACTGAAGCAAGAAATAGAGTTGAATTATTCCGCCATTTGCCACAATATGAGCAGGGGACTCAGCTTCCTGATCTTGTGTCAAAGTTTTTCCAACTTGATACCATTCATCCTGCCATATACAAGGTTGGTTTACAATACATGGCTGGAGATATATGTGGCGGTAATGCTCGTTGTATTGCAATGCTCCATGCATTTCAGCAAGCCATTAAAGACTACTCAACTCCGCCTCAGAAATCTCTCGTCAGAGATTTAACTGCAAAAATTGGTGTCTATGTGTCATTCTTTAATGAATGCAGGCCACTGTCTGTTAGCATGGGTAATGCAATCAGATTTTTAAAAAATCGCATTGCCAAATTACCACCAAGTATTCTAGAATCTGAGGCAAAAGCTACACTTACCTTAGATATCAGTCGTTTTATCAATGAGAAGATAATGCTTGCTGACGAGGTCATAGTTAGACACGCTGCTACCAAGATCAGGGATGGAGACGTTCTTCTCACATATGGATCATCATGTGTAGTAGAGATGCTTCTATTGTATGCCCACGATCTTGGGAAACAATTTCGTGTTGTGGTGGTAGATTCTCGACCAAAACTTGAGGGCCAAGCATTGCTGCGTAGGCTGATAGCAAAGGGCCTAAGTTGTACTTACACTCATATAAATGCTATTTCGTATGTGATGCGTGAAGTAAACCGAGTTTTTCTGGGTGCTGCTGCTGTATTAGCCAATGGCACTGTATATTCAAGAGTGGGGACTGCAGGTATTGCCATGGTTGCAGATGCATTCCATGTTCCAGTATTATTCTGCTGTGAAGCGTATAAGTTTCATGAAAGGGTACAACTGGATTCAATATGCTTTAATGAATTAGGTGACCCAGACGCTATCTCAAAGGTTTCAGGAAGGACTGACATCAATTATTTAGATAATTTGACTTCTAAAGAACATTTGCAACTTCTAAATTTAATGTATGATGCTACACCTTCAGATTACATCTCAATGATTGTCACAGATTATGGCATGGTAAGTCTGAGCGTGTCTCTCTCTCTGCGTGCATGCACGTATCTTCTGGTTATTTATTTACTTGATAGTCCAAAAACGTATGAAAAAAAAGGAGAAGGGAATAAGGACCTCTTGGAAAGACACGACAGGTATTACATTGATATAGGGGCTTGTACCATTAATTAG 2073 46.21 MDARRASRVVIDPKVRQVGFFTPDAPHSPGPTLPAPPDCTTSPLSDSPTSNSLSPVMIPPPRHPSDNLSSRTAVLPVPASGNWRHPEDLVPVGSHNPSEMLIGSSSPSSRIAGEELEFSEDSSASVLLRRSGSGKLASSCPGVGFHTAAKPADNLQTMPANSVRTLGTNKPAGATEKMGGASAEAKDHIPSSKPLKAKTTKAERRALQEAQRAAKVSAKGEANKSGTASGATAGKVGKQPPTVKGGPATPSVASADNRGGDRIVDKERKKDAPPPRMQFDDKHRVERAKKRAVFSQTEARNRVELFRHLPQYEQGTQLPDLVSKFFQLDTIHPAIYKVGLQYMAGDICGGNARCIAMLHAFQQAIKDYSTPPQKSLVRDLTAKIGVYVSFFNECRPLSVSMGNAIRFLKNRIAKLPPSILESEAKATLTLDISRFINEKIMLADEVIVRHAATKIRDGDVLLTYGSSCVVEMLLLYAHDLGKQFRVVVVDSRPKLEGQALLRRLIAKGLSCTYTHINAISYVMREVNRVFLGAAAVLANGTVYSRVGTAGIAMVADAFHVPVLFCCEAYKFHERVQLDSICFNELGDPDAISKVSGRTDINYLDNLTSKEHLQLLNLMYDATPSDYISMIVTDYGMVSLSVSLSLRACTYLLVIYLLDSPKTYEKKGEGNKDLLERHDRYYIDIGACTIN 690
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 70451935 70461861 + Tan0002310.2 Tan09g1952 764295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g1952 690 Gene3D - 443 646 IPR042529 -
Tan09g1952 690 MobiDBLite consensus disorder prediction 39 53 - -
Tan09g1952 690 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 47 641 - -
Tan09g1952 690 Pfam Initiation factor 2 subunit family 349 637 IPR000649 GO:0044237(InterPro)
Tan09g1952 690 MobiDBLite consensus disorder prediction 154 169 - -
Tan09g1952 690 MobiDBLite consensus disorder prediction 259 286 - -
Tan09g1952 690 SUPERFAMILY NagB/RpiA/CoA transferase-like 302 640 IPR037171 -
Tan09g1952 690 MobiDBLite consensus disorder prediction 1 112 - -
Tan09g1952 690 MobiDBLite consensus disorder prediction 148 286 - -
Tan09g1952 690 MobiDBLite consensus disorder prediction 189 210 - -
Tan09g1952 690 MobiDBLite consensus disorder prediction 98 112 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g1952 Tan-Chr9:70451935 Tan09g1954 Tan-Chr9:70451935 3.80E-290 dispersed
Tan09g1951 Tan-Chr9:70451935 Tan09g1952 Tan-Chr9:70451935 0.00E+00 tandem
Tan09g1952 Tan-Chr9:70451935 Tan09g1953 Tan-Chr9:70451935 6.50E-258 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g1952 K03680 - csv:101215104 945.651