Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g1953 ATGGGAGGAGCATCCGCAGAGGCCAAAGATCATATTCCAAGTTCGAAACCCTTGAAGGCAAAAACTACAAAGGCTGAAAGACGGGCTTTACAGGAGGCTCAACGAGCTGCAAAAGTTTCTGCAAAAGGTGAGGCAAATAAGTCAGGTACTGCCTCTGGGGCAACAGCTGGTAAAGTTGGGAAACAGCCTCCAACAGTTAAAGGTGGTCCTGCCACACCTTCAGTTGCATCTGCTGACAATAGAGGAGGTGATCGTATTGTTGATAAAGAAAGGAAGAAAGATGCTCCCCCTCCACGTATGCAATTTGATGATAAACATCGGGTAGAAAGGGCTAAAAAGCGGGCTGTGTTTAGTCAAACTGAAGCAAGAAATAGAGTTGAATTATTCCGCCATTTGCCACAATATGAGCAGGGGACTCAGCTTCCTGATCTTGTGTCAAAGTTTTTCCAACTTGATACCATTCATCCTGCCATATACAAGGTTGGTTTACAATACATGGCTGGAGATATATGTGGCGGTAATGCTCGTTGTATTGCAATGCTCCATGCATTTCAGCAAGCCATTAAAGACTACTCAACTCCGCCTCAGAAATCTCTCGTCAGAGATTTAACTGCAAAAATTGGTGTCTATGTGTCATTCTTTAATGAATGCAGGCCACTGTCTGTTAGCATGGGTAATGCAATCAGATTTTTAAAAAATCGCATTGCCAAATTACCACCAAGTATTCTAGAATCTGAGGCAAAAGCTACACTTACCTTAGATATCAGTCGTTTTATCAATGAGAAGATAATGCTTGCTGACGAGGTCATAGTTAGACACGCTGCTACCAAGATCAGGGATGGAGACGTTCTTCTCACATATGGATCATCATGTGTAGTAGAGATGCTTCTATTGTATGCCCACGATCTTGGGAAACAATTTCGTGTTGTGGTGGTAGATTCTCGACCAAAACTTGAGGGCCAAGCATTGCTGCGTAGGCTGATAGCAAAGGGCCTAAGTTGTACTTACACTCATATAAATGCTATTTCGTATGTGATGCGTGAAGTAAACCGAGTTTTTCTGGGTGCTGCTGCTGTATTAGCCAATGGCACTGTATATTCAAGAGTGGGGACTGCAGGTATTGCCATGGTTGCAGATGCATTCCATGTTCCAGTATTATTCTGCTGTGAAGCGTATAAGTTTCATGAAAGGGTACAACTGGATTCAATATGCTTTAATGAATTAGGTGACCCAGACGCTATCTCAAAGGTTTCAGGAAGGACTGACATCAATTATTTAGATAATTTGACTTCTAAAGAACATTTGCAACTTCTAAATTTAATGTATGATGCTACACCTTCAGATTACATCTCAATGATTGTCACAGATTATGGCATGATCCCGCCAACAAGCGTGCCCGTGATCGTACGCGAGTATCGGAGAGAGCACCTATGGGTATAA 1440 42.5 MGGASAEAKDHIPSSKPLKAKTTKAERRALQEAQRAAKVSAKGEANKSGTASGATAGKVGKQPPTVKGGPATPSVASADNRGGDRIVDKERKKDAPPPRMQFDDKHRVERAKKRAVFSQTEARNRVELFRHLPQYEQGTQLPDLVSKFFQLDTIHPAIYKVGLQYMAGDICGGNARCIAMLHAFQQAIKDYSTPPQKSLVRDLTAKIGVYVSFFNECRPLSVSMGNAIRFLKNRIAKLPPSILESEAKATLTLDISRFINEKIMLADEVIVRHAATKIRDGDVLLTYGSSCVVEMLLLYAHDLGKQFRVVVVDSRPKLEGQALLRRLIAKGLSCTYTHINAISYVMREVNRVFLGAAAVLANGTVYSRVGTAGIAMVADAFHVPVLFCCEAYKFHERVQLDSICFNELGDPDAISKVSGRTDINYLDNLTSKEHLQLLNLMYDATPSDYISMIVTDYGMIPPTSVPVIVREYRREHLWV 479
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 70451935 70461861 + Tan0002310.3 Tan09g1953 764296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g1953 479 MobiDBLite consensus disorder prediction 82 110 - -
Tan09g1953 479 MobiDBLite consensus disorder prediction 12 33 - -
Tan09g1953 479 Pfam Initiation factor 2 subunit family 172 462 IPR000649 GO:0044237(InterPro)
Tan09g1953 479 Gene3D - 265 472 IPR042529 -
Tan09g1953 479 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 11 476 - -
Tan09g1953 479 MobiDBLite consensus disorder prediction 1 110 - -
Tan09g1953 479 SUPERFAMILY NagB/RpiA/CoA transferase-like 125 472 IPR037171 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g1953 Tan-Chr9:70451935 Tan09g1955 Tan-Chr9:70451935 1.20E-258 dispersed
Tan09g1952 Tan-Chr9:70451935 Tan09g1953 Tan-Chr9:70451935 6.50E-258 tandem
Tan09g1953 Tan-Chr9:70451935 Tan09g1954 Tan-Chr9:70451935 1.20E-258 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g1953 K03680 - csv:101214144 778.089