Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g1955 ATGGGAGGAGCATCCGCAGAGGCCAAAGATCATATTCCAAGTTCGAAACCCTTGAAGGCAAAAACTACAAAGGCTGAAAGACGGGCTTTACAGGAGGCTCAACGAGCTGCAAAAGTTTCTGCAAAAGGTGAGGCAAATAAGTCAGGTACTGCCTCTGGGGCAACAGCTGGTAAAGTTGGGAAACAGCCTCCAACAGTTAAAGGTGGTCCTGCCACACCTTCAGTTGCATCTGCTGACAATAGAGGAGGTGATCGTATTGTTGATAAAGAAAGGAAGAAAGATGCTCCCCCTCCACGTATGCAATTTGATGATAAACATCGGGTAGAAAGGGCTAAAAAGCGGGCTGTGTTTAGTCAAACTGAAGCAAGAAATAGAGTTGAATTATTCCGCCATTTGCCACAATATGAGCAGGGGACTCAGCTTCCTGATCTTGTGTCAAAGTTTTTCCAACTTGATACCATTCATCCTGCCATATACAAGGTTGGTTTACAATACATGGCTGGAGATATATGTGGCGGTAATGCTCGTTGTATTGCAATGCTCCATGCATTTCAGCAAGCCATTAAAGACTACTCAACTCCGCCTCAGAAATCTCTCGTCAGAGATTTAACTGCAAAAATTGGTGTCTATGTGTCATTCTTTAATGAATGCAGGCCACTGTCTGTTAGCATGGGTAATGCAATCAGATTTTTAAAAAATCGCATTGCCAAATTACCACCAAGTATTCTAGAATCTGAGGCAAAAGCTACACTTACCTTAGATATCAGTCGTTTTATCAATGAGAAGATAATGCTTGCTGACGAGGTCATAGTTAGACACGCTGCTACCAAGATCAGGGATGGAGACGTTCTTCTCACATATGGATCATCATGTGTAGTAGAGATGCTTCTATTGTATGCCCACGATCTTGGGAAACAATTTCGTGTTGTGGTGGTAGATTCTCGACCAAAACTTGAGGGCCAAGCATTGCTGCGTAGGCTGATAGCAAAGGGCCTAAGTTGTACTTACACTCATATAAATGCTATTTCGTATGTGATGCGTGAAGTAAACCGAGTTTTTCTGGGTGCTGCTGCTGTATTAGCCAATGGCACTGTATATTCAAGAGTGGGGACTGCAGGTATTGCCATGGTTGCAGATGCATTCCATGTTCCAGTATTATTCTGCTGTGAAGCGTATAAGTTTCATGAAAGGGTACAACTGGATTCAATATGCTTTAATGAATTAGGTGACCCAGACGCTATCTCAAAGGTTTCAGGAAGGACTGACATCAATTATTTAGATAATTTGACTTCTAAAGAACATTTGCAACTTCTAAATTTAATGTATGATGCTACACCTTCAGATTACATCTCAATGATTGTCACAGATTATGGCATGGTAAGTCTGAGCGTGTCTCTCTCTCTGCGTGCATGCACGTATCTTCTGGTTATTTATTTACTTGATAGTCCAAAAACGTATGAAAAAAAAGGAGAAGGGAATAAGGACCTCTTGGAAAGACACGACAGGTATTACATTGATATAGGGGCTTGTACCATTAATTAG 1542 41.63 MGGASAEAKDHIPSSKPLKAKTTKAERRALQEAQRAAKVSAKGEANKSGTASGATAGKVGKQPPTVKGGPATPSVASADNRGGDRIVDKERKKDAPPPRMQFDDKHRVERAKKRAVFSQTEARNRVELFRHLPQYEQGTQLPDLVSKFFQLDTIHPAIYKVGLQYMAGDICGGNARCIAMLHAFQQAIKDYSTPPQKSLVRDLTAKIGVYVSFFNECRPLSVSMGNAIRFLKNRIAKLPPSILESEAKATLTLDISRFINEKIMLADEVIVRHAATKIRDGDVLLTYGSSCVVEMLLLYAHDLGKQFRVVVVDSRPKLEGQALLRRLIAKGLSCTYTHINAISYVMREVNRVFLGAAAVLANGTVYSRVGTAGIAMVADAFHVPVLFCCEAYKFHERVQLDSICFNELGDPDAISKVSGRTDINYLDNLTSKEHLQLLNLMYDATPSDYISMIVTDYGMVSLSVSLSLRACTYLLVIYLLDSPKTYEKKGEGNKDLLERHDRYYIDIGACTIN 513
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 70451935 70461861 + Tan0002310.5 Tan09g1955 764298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g1955 513 MobiDBLite consensus disorder prediction 82 110 - -
Tan09g1955 513 Gene3D - 265 469 IPR042529 -
Tan09g1955 513 MobiDBLite consensus disorder prediction 12 33 - -
Tan09g1955 513 SUPERFAMILY NagB/RpiA/CoA transferase-like 125 463 IPR037171 -
Tan09g1955 513 Pfam Initiation factor 2 subunit family 172 460 IPR000649 GO:0044237(InterPro)
Tan09g1955 513 MobiDBLite consensus disorder prediction 1 110 - -
Tan09g1955 513 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 11 464 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g1953 Tan-Chr9:70451935 Tan09g1955 Tan-Chr9:70451935 1.20E-258 dispersed
Tan09g1955 Tan-Chr9:70451935 Tan09g1957 Tan-Chr9:70472426 1.60E-221 proximal
Tan09g1954 Tan-Chr9:70451935 Tan09g1955 Tan-Chr9:70451935 1.30E-290 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g1955 K03680 - csv:101214144 737.643