Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g1957 ATGGATGCTCGCCGCGGCTCCCGCATCGTCAACCCCAAAGTTCGTCAGGTCGGATTCTTCACCCTCGACGCTCCTAACCCACCCGGCCGCTCCCTCTCCGGTCCGGCCGACTGTGCCCCTCCTCACCAATCCCTCTCTCCTCCCACCAATTCCTTGTCTCCAGTCATGATTCCCCCTCCCCGTCATCTCTCCGATAACCTCGCCTCTCGTTCTGCTGTTCTTCCTGTTCCCGCTCCGGCCAATTGGAGGAATTCCGCCGATCAGATTCCTGTTGGCAGCTATAACCCTTCCGAGACCCTGCTTGCGACATCCCCTGTGGCCTCCCCTTCCAGTAGAATTGGGGACGACGAGCTGGAGATGTCGGAGGATTCTTCCACCTCCGTTTGGTATCGTCGGAGCGGTTCTGGGAAGATTGCGTCGAGCTTTCCTGGCGTTGGAATTCACATGACGGCTAAGTCTTCAGAGAATTCGCAGGCGGTGCCTCTTAGGACGTTGAAACCTAATAAGCCTGCTGGAGTTGCAGAAAAGAATGGAGGGGCATCCACAGAGGTACAAAATCAACAACCACCATCAAGTTCGAAACCCCTGAAGGCAAAAACAACAAAGGCTGAAAGACGGGCTCTGCAGGAGGCACAACGAGCAGCAAAAGTTTCTGCAAAAGGTGAGGCGAATAAGTCGGGTACTGCTCCTGGTAAACCTATGAAGCAGCCTTCGGCTATGAAAGATAGCACTGCTGCACCTTCAGTTGCATCTACTGACAAAAGAGGAGGTGATCGCACACTTGATAAAGAAAGGAAGAAAGATGCTCCCCCTCCACGAATGCAGTTTGATGACAAAAACAGGGTAGAAAAGGCTAAAAAACGAGCAGTTTTCAACCAAACTGAAGCTAGAAATAGGGTCGAATTGTTTCGCCATTTGCCACAATATGAGCAAGGAACGCAGCTTCCTGATCTTGTGTCAAAGTTTTTCCAACTTGACACCATTCATCCTGCCATTTACAAGGTTGGTTTACAGTATATGGCCGGAGATATATGTGGAGGCAATGCTCGTTGTATTGCTATGCTTCATGCATTTCAACAGGCCATCAAAGACTACTCAACTCCACCACAGAAGTCTCTGGGTAGAGATTTAACTGCAAAAATTGGTGGCTATGTGTCATTCTTCAATGAGTGCAGACCACTGTCTATTAGCATGGGAAATGCAATTAGGTTTTTGAAAAACCGCATTGCCAAATTACCAGTGAATCTTCCGGAATCTGAAGTAAAAGCTACACTTTGCTCAGATATCGACCGTTTTATCAATGAGAAGATTATCATTGCAGATGAAGTCATAGTTAGACATGCTGCTACCAAAATCAGGGATGGAGATGTTCTTCTCACATATGGATCATCATGTGCTGTAGAGATGCTTCTATTATATGCTCATGAGCTCGGAAAAGAATTCCGTGTTGTGGTGGTGGATTCCCGACCTAAACTGGAAGGGCAAGCATTGCTTCGTAGGCTCATAGCAAGGGGCCTAAATTGTACCTACACTCATATAAATGCTATTTCTTACATGATGCATGAAGTAACGCGAGTTTTTCTGGGGGCTGCTGCAGTATTATCTAATGGAACTGTATATTCAAGAGTGGGAACTGCAGGTGTTGCCATGGTTGCTAATGCGTTCCATGTTCCTGTCTTAATCTGCTGCGAAGCCTATAAATTTCATGAAAGGGTACAACTTGACTCGATATGTTTCAATGAATTAGGTGATCCAGACGCTATCTCAAAGGTCCCAGGAAGGAAGGATTTTAATTATCTAGATAATTTGACTGCTAAAGATCAACTGCAACGTCTAAATTTAATGTATGATGCCACACCTTCAGATTACATCTCAATGATTGTCACTGATTATGGCATGATCCCACCTACAAGCGTGCCAGTGATCGTACGCGAGTATCGGAGAGAGCACCTATGGATTTAA 1962 46.69 MDARRGSRIVNPKVRQVGFFTLDAPNPPGRSLSGPADCAPPHQSLSPPTNSLSPVMIPPPRHLSDNLASRSAVLPVPAPANWRNSADQIPVGSYNPSETLLATSPVASPSSRIGDDELEMSEDSSTSVWYRRSGSGKIASSFPGVGIHMTAKSSENSQAVPLRTLKPNKPAGVAEKNGGASTEVQNQQPPSSSKPLKAKTTKAERRALQEAQRAAKVSAKGEANKSGTAPGKPMKQPSAMKDSTAAPSVASTDKRGGDRTLDKERKKDAPPPRMQFDDKNRVEKAKKRAVFNQTEARNRVELFRHLPQYEQGTQLPDLVSKFFQLDTIHPAIYKVGLQYMAGDICGGNARCIAMLHAFQQAIKDYSTPPQKSLGRDLTAKIGGYVSFFNECRPLSISMGNAIRFLKNRIAKLPVNLPESEVKATLCSDIDRFINEKIIIADEVIVRHAATKIRDGDVLLTYGSSCAVEMLLLYAHELGKEFRVVVVDSRPKLEGQALLRRLIARGLNCTYTHINAISYMMHEVTRVFLGAAAVLSNGTVYSRVGTAGVAMVANAFHVPVLICCEAYKFHERVQLDSICFNELGDPDAISKVPGRKDFNYLDNLTAKDQLQRLNLMYDATPSDYISMIVTDYGMIPPTSVPVIVREYRREHLWI 653
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 70472426 70478803 + Tan0019443.1 Tan09g1957 764300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g1957 653 Pfam Initiation factor 2 subunit family 346 636 IPR000649 GO:0044237(InterPro)
Tan09g1957 653 MobiDBLite consensus disorder prediction 20 63 - -
Tan09g1957 653 MobiDBLite consensus disorder prediction 93 129 - -
Tan09g1957 653 MobiDBLite consensus disorder prediction 179 197 - -
Tan09g1957 653 MobiDBLite consensus disorder prediction 255 282 - -
Tan09g1957 653 SUPERFAMILY NagB/RpiA/CoA transferase-like 299 646 IPR037171 -
Tan09g1957 653 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 47 650 - -
Tan09g1957 653 MobiDBLite consensus disorder prediction 142 282 - -
Tan09g1957 653 Gene3D - 439 646 IPR042529 -
Tan09g1957 653 MobiDBLite consensus disorder prediction 93 110 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g1951 Tan-Chr9:70451935 Tan09g1957 Tan-Chr9:70472426 7.70E-293 dispersed
Tan09g1954 Tan-Chr9:70451935 Tan09g1957 Tan-Chr9:70472426 1.60E-221 dispersed
Tan09g1955 Tan-Chr9:70451935 Tan09g1957 Tan-Chr9:70472426 1.60E-221 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g1957 K03680 - csv:101215104 1176.39