Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g1962 ATGGAATCGGACGAAGAAGATTTCATTTTCTATGGAACCCCAATTGAGCGGGAGGAAGAGATCAACAGCCGTAAAAAGAAATCTGTGGCTGATGCTTCTGGTACCATGCGAAGCCTCCCTCCCTGGAAACAAGAGGTTAGAGATGAGGAAGGGCGTAGAAGATTTCATGGGGCATTCACCGGTGGATTTTCTGCTGGCCATTACAACACAGTGGGCTCAAAAGAAGGTTGGACTCCACAGTCATTCACGTCGTCCCGAAAGAATCGAGCCGAAGTCAAGCAGCAAAACATATTAAATTTCTTGGACGAAGATGAAAAAGCTGAATTGGAAGGTCGAGGCCTGGGGACATCTTTCCAGTTTGATACATTTGGGTTCACAGCAGTAGAGCTTGCTCGTAAACAAGCTGAAAAGGAGCAACAGCAGAGGCCGTCTGCAATTCCTGGACCTGTTCCTGATGAATTAGTTGTTCCAGCTGCAGAATCCATAGGTGTGAAGTTATTATTAAGGATGGGATGGCGCCATGGACGTGCAATAAAGGACTCAAGAGCTAACTCCCTCTATGATGCTCGAAGAGATGCTCGAAAAGCATTTCTAGCATTTTCAACTGGTGATACCAAATCAGAGATCCCCAATTCTGAACCCTTTCAGGAGGATGATGGTGTTTCTCCTCAACCTGCAAAGGGCGATATTTCGTCTTCTCAGAGCACGCCAGTTTATGTGATCAACCCAAAGCAGGATTTGCACGGTTTAGGTTTTGATCCTTACAAGCATGCACCAGAGTTTAGGGAAAAGAAAAGAGCACGCACAGCTGGGAAGCAAGAAGGTTACAGAAAAGTTTTCTCCACGAAAAATAATCTGTTTGGCTTTAGGACTGAGAGGGTTGCTTCTGGCTTTGGCATTGGTGCGCTTGAAGAACTTGATGTCGAAGATGAGGATGTCTATACCTCTGGTTATGAGTTCGAGGAAACATATGTACAAGAAGACGATGAACCACCTTCTAAATTGATTACAGATGGTAAACAAAAGTTGATTGAAAGAAAAGTAGATGGTGTCTTGCCTGGGTTTAGAGTTGCATCAAACTCTGACTACCAGTTGGAGAGGTTTGATCCTCCAGTAATACCTAAGGACTTTATCCCCCACCACAAATTTGCGGGGCCTCTCAATGGTGGCTATAAGCTTGCTGATACCCCTCCCGTTGAGGTTCCTCCTCCCGATGATAATAATCTGAAACTTCTAATTGAAGGGGTGGCAACTTTGGTTGCTCGCTGCGGAAAACTATTTGAGGATCTCTCTAGAGAAAAAAATAAGTCAAATCCATTATTTAGTTTTCTTACTGGAGGAACTGGTCATGAGTATTATTCAAGGAAGCTATGGGAGGAGCAACTGAAGCGCAGGGACCAACCTAAGCATCAATTTGATGATAAATTGTCCCCAAGCCTGGAGAAGATGACAGCCGAAAGTCGTGGGAAAATCCTAGGTGAAAGGCCTTTGGCAAGAAGCTCTAAGGAGTTAAATCCACCCGCTGCTTCTGATGGCGTCCATGTCCAATACAATCTTTCAGATACATTTATTAAACCTGCATCATCTGGTGGGATGCTAGAGGTTGTCAAACCTTTCAAGGATGATCCGGCAAAGCAAGAAAGATTCGAGTATTTTTTAAAGGAAAAGTACCAAGGAGGCCTGCGCACTGCTGCTCCGGTTGGAGCTATTAACATGTCAGAAGCAGCTCGTGCACGTGAGCGCTTGGACTTTGAGGCTGCTGCAGAGGCAATTGAGAAAGGGAAAGGGTTGAAAGAAGCTAAGCTCTCTGCCGAGCACTTTGTGGATTTTTTAACCACTGGAGGAATGCAGTTTACTTCTGGTGGTGTAGAGGAAGTGAAAGATACGAAAGTAGAAGGTTTAATTATGGAGAAAATGTTCCCTAAACGGGAAGAATATCAGTGGCGTCCTGCTCCTATTCTGTGCAAGCGGTTTGATCTCATTGATCCCTACATGGGGAAGCCACCACCAGCTCCTAGGATGAGGAGCAAGTTGGATACACTTATCTTCACATCAAATTCAGTCAAATCGACAAAGATAGAAGAACCTTTAACCTCAACCCTTTCTCCATTACCTCAATCAAATGCTGAAGAAAAAGACAAAGATGCGTCCGAAAATGTAAATGAAAAAGAAATAGAAGTTGAATGTGTTGATCGACCCGTTGATCTCTATAAGGCTATTTTCTCCGATGAGTCTGAGGACGAAGAGAGTACATCAACTCTCAAGCAAGCCGAGGATCCTAAAAAGAAAGTTGAAGTGGCTAATACAACACTAAACCGTTTGATTGCGGGTGACTTTCTGGAATCTTTGGGTAAAGAACTGGGCCTGGAAGTGCCTCCAGATCTGCCTCCATCGAAGAAAGGCCAAATTGCAGCTCCTCAGACAGAAGCTGTACCTATTGGTGAACAAAATACCGATATCCTTTCAGTTGAAGATAAGACTTATCCCACCCCATCATCCACTGGGATTCCATCGGACCACAGAAAAACAGGCAACATGGAATATGATCTAAATGGCAGAAAAGAAGACAATGAAGTAAATCATAACTCAGCTGGAAGTGGTGATAAAATTATGGAGACCAGTTCTTCCAGGAAAAATTCGGGTAAAGTTTATGAAGAAAAGATGTACAAGGAGGATAGAAAGGCTAACAACAGGCGAGCTGATGTTCATCGTGGTTGGAGCAACAGCTCATCATCGGAAGATGAAAAGAGAAGAAAACGTTCAAGGAGGCGCAGGTATAAAAGTACCGACTCAGAGGACAGTGCATCAAGTGATTATCGTTCTAAAGAGCACTCTAGATCACGAGATAGAAAGAAAGGATCTTCTCAAGAAAAGAAGAGTCGGAGAAAACACTCAAAACATCATAAGCACAGACATAGAGATTCTTCCCCCAGCGATCATCATCGTTCTGGAAAAGATCGTACAGTATCTGAGAGAGAGAAACATAGATGGAGAGATTGA 3000 43.83 MESDEEDFIFYGTPIEREEEINSRKKKSVADASGTMRSLPPWKQEVRDEEGRRRFHGAFTGGFSAGHYNTVGSKEGWTPQSFTSSRKNRAEVKQQNILNFLDEDEKAELEGRGLGTSFQFDTFGFTAVELARKQAEKEQQQRPSAIPGPVPDELVVPAAESIGVKLLLRMGWRHGRAIKDSRANSLYDARRDARKAFLAFSTGDTKSEIPNSEPFQEDDGVSPQPAKGDISSSQSTPVYVINPKQDLHGLGFDPYKHAPEFREKKRARTAGKQEGYRKVFSTKNNLFGFRTERVASGFGIGALEELDVEDEDVYTSGYEFEETYVQEDDEPPSKLITDGKQKLIERKVDGVLPGFRVASNSDYQLERFDPPVIPKDFIPHHKFAGPLNGGYKLADTPPVEVPPPDDNNLKLLIEGVATLVARCGKLFEDLSREKNKSNPLFSFLTGGTGHEYYSRKLWEEQLKRRDQPKHQFDDKLSPSLEKMTAESRGKILGERPLARSSKELNPPAASDGVHVQYNLSDTFIKPASSGGMLEVVKPFKDDPAKQERFEYFLKEKYQGGLRTAAPVGAINMSEAARARERLDFEAAAEAIEKGKGLKEAKLSAEHFVDFLTTGGMQFTSGGVEEVKDTKVEGLIMEKMFPKREEYQWRPAPILCKRFDLIDPYMGKPPPAPRMRSKLDTLIFTSNSVKSTKIEEPLTSTLSPLPQSNAEEKDKDASENVNEKEIEVECVDRPVDLYKAIFSDESEDEESTSTLKQAEDPKKKVEVANTTLNRLIAGDFLESLGKELGLEVPPDLPPSKKGQIAAPQTEAVPIGEQNTDILSVEDKTYPTPSSTGIPSDHRKTGNMEYDLNGRKEDNEVNHNSAGSGDKIMETSSSRKNSGKVYEEKMYKEDRKANNRRADVHRGWSNSSSSEDEKRRKRSRRRRYKSTDSEDSASSDYRSKEHSRSRDRKKGSSQEKKSRRKHSKHHKHRHRDSSPSDHHRSGKDRTVSEREKHRWRD 999
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 70501067 70512682 + Tan0006304.1 Tan09g1962 764305

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g1962 999 MobiDBLite consensus disorder prediction 842 862 - -
Tan09g1962 999 MobiDBLite consensus disorder prediction 977 999 - -
Tan09g1962 999 MobiDBLite consensus disorder prediction 811 840 - -
Tan09g1962 999 Pfam Surp module 412 459 IPR000061 GO:0003723(InterPro)|GO:0006396(InterPro)
Tan09g1962 999 PANTHER G PATCH DOMAIN-CONTAINING PROTEIN 1 2 973 - GO:0003723(PANTHER)|GO:0005634(PANTHER)
Tan09g1962 999 MobiDBLite consensus disorder prediction 64 89 - -
Tan09g1962 999 MobiDBLite consensus disorder prediction 863 878 - -
Tan09g1962 999 MobiDBLite consensus disorder prediction 20 50 - -
Tan09g1962 999 MobiDBLite consensus disorder prediction 204 237 - -
Tan09g1962 999 Pfam Protein of unknown function (DUF1604) 39 111 IPR011666 GO:0006397(InterPro)
Tan09g1962 999 SUPERFAMILY Surp module (SWAP domain) 391 462 IPR035967 GO:0003723(InterPro)|GO:0006396(InterPro)
Tan09g1962 999 MobiDBLite consensus disorder prediction 879 901 - -
Tan09g1962 999 MobiDBLite consensus disorder prediction 694 721 - -
Tan09g1962 999 FunFam G patch domain-containing protein TGH 376 466 - -
Tan09g1962 999 MobiDBLite consensus disorder prediction 741 762 - -
Tan09g1962 999 Gene3D Surp module 391 466 IPR035967 GO:0003723(InterPro)|GO:0006396(InterPro)
Tan09g1962 999 MobiDBLite consensus disorder prediction 926 954 - -
Tan09g1962 999 MobiDBLite consensus disorder prediction 71 89 - -
Tan09g1962 999 MobiDBLite consensus disorder prediction 955 976 - -
Tan09g1962 999 SMART surpneu2 410 462 IPR000061 GO:0003723(InterPro)|GO:0006396(InterPro)
Tan09g1962 999 MobiDBLite consensus disorder prediction 788 999 - -
Tan09g1962 999 ProSiteProfiles SURP motif repeat profile. 412 456 IPR000061 GO:0003723(InterPro)|GO:0006396(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g1962 K13123 - - csv:101222702 1703.72
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g1962 Tan-Chr9:70501067 Tan09g1963 Tan-Chr9:70501067 0.00E+00 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g384 . . . . . . . . . . . . . . . . Cpe04g01420 Bhi02g00019 Tan09g1962 . . Hepe09g0315 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Lsi06g01363 . Chy02g02393 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009521 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 2 1 33