Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g2023 ATGAGGTCTCGGCCCTTCGCTTCCAACGGATCCGTCGCCGAACTTACCGGCTTTGCCGTTGTGCTTCTCTTTCTACTTTCCAGCTTCAGTTTCACTTCAACAGAAGCCTATGATGCACTTGATCCCAACGGGAACATCACAATCAAATGGGATGTAATGAGCTGGACACCGGATGGCTATGTTGCTGTTGTTACAATGTACAACTTCCAGCAATACCGCCATATCCAAGCTCCAGGTTGGACATTGGGGTGGACATGGGCAAAGAAAGAAGTGATTTGGAGCATGATGGGAGGCCAAACAACAGAACAGGGAGACTGTTCAAGGTTCAAAGGAAATACTCCACATTGCTGCAAGAAAGATCCAACCGTTGTGGATTTATTGCCAGGAACTCCTTACAATCAGCAGATTGCAAATTGTTGCAAAGGTGGAGTGATAAACTCCTGGGCCCAAGACCCAGCCAATGCAGCAAGTTCATTTCAAGTCAGTGTTGGTGCTGCAGGATCAAGTAACAAAACTGTCAAACTCCCCAAAAACTTCACTCTTAGAGCACCGGGACCTGGATACACTTGTGGTCCAGCAAAGATTGTGAAGCCAACCCGATTTATGTCTGGAGATAAAAGAAGAATAACTCAAGCTTTGATGACTTGGAATGTTACATGCACCTATTCTCAATTCCTTGCTCAGAAGACACCCACTTGTTGTGTTTCCCTCTCATCCTTCTACAATGATACCATTGTCAACTGCCCAACCTGCACTTGTGGATGTCAAAACAACACGGCGGGTCCTGGGAGCTGTGTGGATTCAGATTCTCCACATTTAGCTTCAGTAGTATCAACTCCTGATAAATCGGGCATCAATGAACCCCTGGTTCAGTGTACTAGCCACATGTGTCCCATTCGAGTCCATTGGCACGTGAAGCTGAATTACAAGGACTACTGGAGGGTGAAGATTACAATCACCAATTTCAATTACAGAATGAACTACACACTCTGGAATCTCGTAGTGCAGCATCCCAATTTTGATAATATAACTCAATTATTCAGCTTTAACTATAAGTCGTTGAGCCCATATGGTGACCTAAATGATACTGCTATGTTATGGGGAGTTAAGTTCTACAATGATCTGCTCAATCAAGCTGGCCCTCTTGGTAATGTGCAGTCCGAGCTTCTATTCCGGAAAGACCAGAACACTTTCACCTTTGACAAGGGTTGGGCTTTTCCAAGAAGAGTTTATTTTAATGGTGATAACTGTGTGATGCCACCTCCAGATGCCTATCCCTATTTGCCAAATGCCAGTTCCAGACCAGCTATATCTCTACTCGTGACAATCTTAATATCTTTGGCATTACTGTTGAATTTTGCACTTTAA 1368 44.3 MRSRPFASNGSVAELTGFAVVLLFLLSSFSFTSTEAYDALDPNGNITIKWDVMSWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGGQTTEQGDCSRFKGNTPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVINSWAQDPANAASSFQVSVGAAGSSNKTVKLPKNFTLRAPGPGYTCGPAKIVKPTRFMSGDKRRITQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNDTIVNCPTCTCGCQNNTAGPGSCVDSDSPHLASVVSTPDKSGINEPLVQCTSHMCPIRVHWHVKLNYKDYWRVKITITNFNYRMNYTLWNLVVQHPNFDNITQLFSFNYKSLSPYGDLNDTAMLWGVKFYNDLLNQAGPLGNVQSELLFRKDQNTFTFDKGWAFPRRVYFNGDNCVMPPPDAYPYLPNASSRPAISLLVTILISLALLLNFAL 455
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 70835222 70838012 - Tan0015813.1 Tan09g2023 764366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g2023 455 PANTHER PROTEIN COBRA 24 447 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)|GO:0046658(PANTHER)|GO:0052324(PANTHER)
Tan09g2023 455 PIRSF COBRA 9 455 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
Tan09g2023 455 Pfam COBRA-like protein 60 223 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0795 Tan-Chr1:7584424 Tan09g2023 Tan-Chr9:70835222 1.90E-115 dispersed
Tan02g0716 Tan-Chr2:6675601 Tan09g2023 Tan-Chr9:70835222 3.20E-108 dispersed
Tan04g1898 Tan-Chr4:62525551 Tan09g2023 Tan-Chr9:70835222 1.80E-181 dispersed
Tan04g1899 Tan-Chr4:62527910 Tan09g2023 Tan-Chr9:70835222 1.70E-222 dispersed
Tan05g2342 Tan-Chr5:74854290 Tan09g2023 Tan-Chr9:70835222 5.20E-151 dispersed
Tan09g2023 Tan-Chr9:70835222 Tan10g1052 Tan-Chr10:9420233 6.00E-34 dispersed
Tan09g2022 Tan-Chr9:70831783 Tan09g2023 Tan-Chr9:70835222 5.50E-189 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g2023 - - - 0.0