Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g2029 ATGTATGGTCAAGCAAATTATGCTTCTCAGTTCGGGCAGGGTCCTCAGAAACCATGGCCACCTGCATATCAACAGCGTGCTGTAGCACCTCCGCCGCCTCCTCCTCCTACCTCATATATTCAACCAGGCCCTCCAATCCCATCACACCCTATAACTCAACAAACACCTGCTCCTCCACCTCCGACTGGGCAAACTCTTCATTTGTCTCAGTCGGGTTCCCATGGCCCACCACCACCACCTCCCCTTTGTCAGGGCCCATCCATTCAAGTGCTACCTGGTGGGATCACAAATATTCGTCAAACATATTTTCACACGTTTCCACCAGTCCATGGAAGCACACAAGTTTCTCAATTTAACTCAAATGCTCAACAGAATGTACAACTTTCACACTCAGGAGTTCAGAACATGCATCATGTTCTACCTCCGCCGCCGCCGCCGCCACCACCGCTGCTGCCGCCACCGCCACCACCACCACCGCCTCCTCATGCTCCTAGTCCAGATTTATTACGGCCTCCGCAGCCCTCTACCGTAGTACCTCTTCTTCCTCCTTCCCAAGGACAAACGTTGTATGGAGCTCGAATTCATCCACCATTGCAACAAGATGGTTTGCCGGGCTTTCCCTCTATCCCACAACATCCCACAACATCCAATTTTCCTACGCCCCCTTCTTTTGGTGGCCTCATGCAATCAAATCTTGGAGAATCTCATTTGCTTCTAGTGGCTCCTCCACCACCACCATCCTCTCCGCCACCTATTCCACCTTCTCCCCCTCCTCCCACCTCGCCCTCTTCGATTCCAAACCCAGATTCTTCCAACTTGTCGTGCCGGTCTGAATTTGATCCTAGTTCTACCATTCATTGTAGTAAAAAGTTGAAGGCCTTTGAAATTGATCAAGGAGGCGCACCTCCCAGTCATTTAGGGGATAATGGACCCGAGCATGACGAACAAAGAAATTTAGAGGGTGGTATTGGCCTCATGATGGATTCTAAAGTGGACAATGAGATAGTGTCAAATAAAGATTATGTGCAGGTTCTTCCTCCATCTCCACCTAAGCCAAAAGATGATAGAATTGTCAGGAAGATAGAAGTATTTTGTCAGCTCATTGCTAATAATGGTTCCAGTTTTGAAGTCGCAACTCGGCACAAGGAAGTTGGGAATCGAGAGTTTGAATTTTTATTTGGTGGTGAACCAGGAAGTGAATCTGCTATTGGCCATGAATATTTCCTGTGGATGAAGAAGAAATATAATTTGGCTTGCAAAAATAAAGAAATGAAAGAAAAAACTCCATCGAGATCTTTAAGCATTGAACCACAATCTGAGTATTTGACAGCGTCAGCAGCATCCATTTCACCTGCAAACTCTGACATGGAGATGGAAGATGACATCACCCCAGCTGATATAGGAGAGGAAACTAGTCACTCATTTGAAATTCAAAGCTACGAGAGCAAATCAAGAAAAGAAGAGCATGATGTTAAGGATCAGTTACAAGGACCTGAAGATTTGCGGAGATGTAGCCGAGAAAAGGATAAAGAAGCTGAAGATGGAGGGCCAAAACTTCTGCTCGACCGTGAAAAATCTGTCAGCGTTGCAGCTTGCCAAGTTCACAGCCCTGTCAGAAGTACTACTGAAGTTTCTGAACCCTCTTTAGGAAACAATTTTGAGAGTTCTGTTACCTGCTTGCAAAATGACAAAAATCTCGCTGCCGAAGGAGCAGCTTTTGAAGCCATTAATTCTAGTCAGTCTACTGCACTAATTACAGGTGGCAGCCCGTTTAGACTTATACAGGACTATTCTTCCGATGAAAATTCAGAAAGCGACGAGGAACATCTTAAAGATGTCCGTTTTGTTGCTATCTCACCTTCAACTCCAGCTTCTTCCAAGACTTCTGACAATGACACTGATAATCTGACTATTCTTGGATCAAAAGGCTCTTGCCAGGTTCAACGGAGTTATGCTCCACCTTGTGAATCCTCCATGCCTGAATCTGGTGCTCAGTGCCTCTCAGAATCACCAAAACTGGTTTTTGGTTCCAGTGAGGCAAATGTCAGCAAGACAGCGAATGAACAGAGTTACAACAACCAACAGAATCAAATTGGTACTAGCAACAGTTCTAAGTCTTTGGATGCAATGAATGGTCGTAGTGTTGATGTTCTCCAAGATACTGACAACTTACAAAAAGAAAATGATGAGGAAAAGGTGAAGTTGGGATCATCTCCTGTAAAAATAGATGAATTTGGAAGATTAGTTAGAGAAGGTGGTAGTGATAGTGATTCAGATGATTCACACTATAAAAGGAGACATAAGAATAGAAGAACTAGAAATAGTAGCGAAAGTCCTTCTCCTGTTGATAGAAGGAGGGGACGAAGGAGTCCATGGAGAAGAAGGGAGAGGCGAAGCCACTCTCGCAGTTGGTCTCCTCGTAACCAAAGAGGCAGAAGCAGGTCTCCTATCAGCAGGCGTACAAGTCAACTTAATGATGAGAATATGAGACGGGATAAGGGTCTGTTACGAAAATGCTTTGACTTTCAGCGAGGTAGGTGCTATAGAGGAGCATCTTGTCGCTATGTGCACCATGAACCCAGCAAGAATGATGGATCAAGACTGCGTAGGAGCAAACATCACGATGTTCACCCAATTTCAAAGAATACAAAGAGTAGAGAAGACAGTATGAACATGTCTAGGGAAGTATCAGATCCTGGGCATATTGAAGTCGAGAATCAGGATTGCATCCAGCATAATGGGTCCCCAAAATATGATACTCATAATTGGAAGACAGATAGTCCCCCTGGCGATCCAGACTCGGATGTAAATAAATGTCAGAGTTCTAGAGATAGAACTGGCTTAGTTCAAGAAAAATTAATTGATTCAAAACCAGCAGAGGCTGTCCACATTCATGTTGATGATAATGGTCAAGAAACAGAGAAGTCTTATGACCAAAGGTCAGTTATGGCCTCCTCACAATGCATGAGCAATGCTGATACTGAGAAATTTTCTGGTGATAATTCCACAAGCATTCTGACTTCTGCAGAGAATTCTGGGGCTCGGCAATCCAACATGTTGGTTTCAGAGCTTCAAACTGCCAATAGCCTCTCACACCAGATGGATGGTTCTTTTGTCTCCAATTTATTACCTGATCAAGTACCTGCGGTTATCACCAATAAAGCTCCTGAATGTGAACATTTTCCGGATGAAACTTCATCCATTAATCCACAGTTTGATGCCAGTTCTGCTAGTCAGCCACCTATGACCTCACAATTTTTATCAGAGTCTCTAGTACCAAAACCATTATCTGCTACTGCTCCAGGTTGTGCTATTGACGTTGCCCATCCTCTTAGAGAGCTGCCTCCTCCACCTCCGTTGCCTCCTCCACCTCCTCGAATAATTTCACATGTCACTAGTGCTGAGGTTCCAATGCCTGCCCCCTATAATTTTGTGTCACAAAATGCGTCATTTCCTTCTAAATCATCACTACCAGGAGGTTTTCATCCTCATCAAGATTTTGTATCCATCCAACCATCTCATTACCACAGTGCCTCTTTACTGCCACCTAAGCCGTTGTATGATTCAACATTGACTCCTGTAACTACCAAAGATGGTACGCCAATGCAATTTCATCAGAGTCATTTGTCTCAAGGAAGTGATCTGGGTTCTCAGTTTGTTATGAAATCCCAGCCATTGGAGTTGCATTCTCACTCTAAGCTTGGTGAGTCCCCATTACAGGAGCCTTATAGAGCTCTAATGCATATGGATGAAATTAGATCAGTTGCCCCAGTTGCAAATAATCGGCCTAGTCAACCGTTTGGATTCCCGAGCTTTCAGAACGAAGAAAACTTTGGGCGGACTTCTGTGGAGATGAATTCTTCAATTTTTTTTCCTCATCGAAACTTTAATGACCAATCTATGCCCTTTACAAGTGCAAATAGAATGCAATCTTCTGGTGACAATTTTCCTACTAGTGAATTTCGAAGTTCATTTTCACAGTTTCATCCTTATTCACGCTTTCAACAGCCATTTTATGCCTCACAACCTGCTCATGATGGTTTGTTACGTGACTCAAGTGAGATTGGTGCTATGTCTCGACATTATCCCGATCCTCTAAGCAGGAACCATTCGTCTTTGCTTCCCGATTTTGGGAGTTTGGGAGTTACCACTTATCATAATCCTTATGCGTCTACTTTTGAGAAACCACTCAGCTCCAACTTCAGATCTAGCATTTTGAACTTTGGAAATGATGGACCTAGTGGTGATATACATGATTCTACTTTCAATGCGAGCAATGTTCGAGTTGATGGGCAAGGTGCTAATTATGTTGGATCAAGGCTGACAACTGCATCACCAAACTCCACCAAACCTTTGGGGAAACTCTTGCCCAGCCCAGGTGGTGATCAGTATGATCCACTATTTGACAGCATCGAGCCATCATCACCTATAATCAAGAAAGCTGATCGTGGTCAAAAGCTGGAAAAAGCAAGAGAATCTCATATGATGACAAGACTTGGTGGTTCCCATAAATTACTAGATGTGGAGGAGAACAATAAGCATAAGGAAGTTGCTGCTGTGGTTTCAACTACCTCACTAGATAATGATGAATTTGGGGAGACAGCAGATGCAGAAGCTGGTGCTGTTGAGAATGACTTTGACGACGAAGCGAACTTAATAGGAGAGATTGAAATTGATCAGGTTAAATCCTCAGAGAAGAGCAAGAAATCCAAAGGCTCTAGGTCACTAAGGCTTTTCAGGATTGCTATTGCCGATTTTGTTAAGGAAGTTCTAAAACCATCATGGCGACAGGGCAATATGAGCAAGGAAGCTTTTAAGACAATTGTCAAGAAGACTGTTGACAAGGTATCTGGAGCTATGAAGAGTCACCAAATACCCAAGTCTCAAGCAAAGATAAATCGATACATTGATTCATCACAACGAAAACTGACAAAGCTTGTTATGGGTTATGTTGACAAGTACGTTAAGACATAG 4974 43.65 MYGQANYASQFGQGPQKPWPPAYQQRAVAPPPPPPPTSYIQPGPPIPSHPITQQTPAPPPPTGQTLHLSQSGSHGPPPPPPLCQGPSIQVLPGGITNIRQTYFHTFPPVHGSTQVSQFNSNAQQNVQLSHSGVQNMHHVLPPPPPPPPPLLPPPPPPPPPPHAPSPDLLRPPQPSTVVPLLPPSQGQTLYGARIHPPLQQDGLPGFPSIPQHPTTSNFPTPPSFGGLMQSNLGESHLLLVAPPPPPSSPPPIPPSPPPPTSPSSIPNPDSSNLSCRSEFDPSSTIHCSKKLKAFEIDQGGAPPSHLGDNGPEHDEQRNLEGGIGLMMDSKVDNEIVSNKDYVQVLPPSPPKPKDDRIVRKIEVFCQLIANNGSSFEVATRHKEVGNREFEFLFGGEPGSESAIGHEYFLWMKKKYNLACKNKEMKEKTPSRSLSIEPQSEYLTASAASISPANSDMEMEDDITPADIGEETSHSFEIQSYESKSRKEEHDVKDQLQGPEDLRRCSREKDKEAEDGGPKLLLDREKSVSVAACQVHSPVRSTTEVSEPSLGNNFESSVTCLQNDKNLAAEGAAFEAINSSQSTALITGGSPFRLIQDYSSDENSESDEEHLKDVRFVAISPSTPASSKTSDNDTDNLTILGSKGSCQVQRSYAPPCESSMPESGAQCLSESPKLVFGSSEANVSKTANEQSYNNQQNQIGTSNSSKSLDAMNGRSVDVLQDTDNLQKENDEEKVKLGSSPVKIDEFGRLVREGGSDSDSDDSHYKRRHKNRRTRNSSESPSPVDRRRGRRSPWRRRERRSHSRSWSPRNQRGRSRSPISRRTSQLNDENMRRDKGLLRKCFDFQRGRCYRGASCRYVHHEPSKNDGSRLRRSKHHDVHPISKNTKSREDSMNMSREVSDPGHIEVENQDCIQHNGSPKYDTHNWKTDSPPGDPDSDVNKCQSSRDRTGLVQEKLIDSKPAEAVHIHVDDNGQETEKSYDQRSVMASSQCMSNADTEKFSGDNSTSILTSAENSGARQSNMLVSELQTANSLSHQMDGSFVSNLLPDQVPAVITNKAPECEHFPDETSSINPQFDASSASQPPMTSQFLSESLVPKPLSATAPGCAIDVAHPLRELPPPPPLPPPPPRIISHVTSAEVPMPAPYNFVSQNASFPSKSSLPGGFHPHQDFVSIQPSHYHSASLLPPKPLYDSTLTPVTTKDGTPMQFHQSHLSQGSDLGSQFVMKSQPLELHSHSKLGESPLQEPYRALMHMDEIRSVAPVANNRPSQPFGFPSFQNEENFGRTSVEMNSSIFFPHRNFNDQSMPFTSANRMQSSGDNFPTSEFRSSFSQFHPYSRFQQPFYASQPAHDGLLRDSSEIGAMSRHYPDPLSRNHSSLLPDFGSLGVTTYHNPYASTFEKPLSSNFRSSILNFGNDGPSGDIHDSTFNASNVRVDGQGANYVGSRLTTASPNSTKPLGKLLPSPGGDQYDPLFDSIEPSSPIIKKADRGQKLEKARESHMMTRLGGSHKLLDVEENNKHKEVAAVVSTTSLDNDEFGETADAEAGAVENDFDDEANLIGEIEIDQVKSSEKSKKSKGSRSLRLFRIAIADFVKEVLKPSWRQGNMSKEAFKTIVKKTVDKVSGAMKSHQIPKSQAKINRYIDSSQRKLTKLVMGYVDKYVKT 1657
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 70870137 70879190 + Tan0006289.2 Tan09g2029 764372

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g2029 1657 ProSiteProfiles Zinc finger C3H1-type profile. 838 860 IPR000571 GO:0046872(InterPro)
Tan09g2029 1657 MobiDBLite consensus disorder prediction 24 63 - -
Tan09g2029 1657 MobiDBLite consensus disorder prediction 478 519 - -
Tan09g2029 1657 MobiDBLite consensus disorder prediction 908 922 - -
Tan09g2029 1657 MobiDBLite consensus disorder prediction 297 318 - -
Tan09g2029 1657 SUPERFAMILY Surp module (SWAP domain) 337 415 IPR035967 GO:0003723(InterPro)|GO:0006396(InterPro)
Tan09g2029 1657 MobiDBLite consensus disorder prediction 209 230 - -
Tan09g2029 1657 MobiDBLite consensus disorder prediction 808 823 - -
Tan09g2029 1657 MobiDBLite consensus disorder prediction 134 279 - -
Tan09g2029 1657 MobiDBLite consensus disorder prediction 995 1015 - -
Tan09g2029 1657 ProSiteProfiles SURP motif repeat profile. 360 408 IPR000061 GO:0003723(InterPro)|GO:0006396(InterPro)
Tan09g2029 1657 MobiDBLite consensus disorder prediction 878 902 - -
Tan09g2029 1657 MobiDBLite consensus disorder prediction 744 764 - -
Tan09g2029 1657 MobiDBLite consensus disorder prediction 1 88 - -
Tan09g2029 1657 MobiDBLite consensus disorder prediction 138 179 - -
Tan09g2029 1657 MobiDBLite consensus disorder prediction 856 871 - -
Tan09g2029 1657 MobiDBLite consensus disorder prediction 787 807 - -
Tan09g2029 1657 MobiDBLite consensus disorder prediction 479 519 - -
Tan09g2029 1657 MobiDBLite consensus disorder prediction 856 947 - -
Tan09g2029 1657 MobiDBLite consensus disorder prediction 678 708 - -
Tan09g2029 1657 MobiDBLite consensus disorder prediction 744 829 - -
Tan09g2029 1657 PANTHER PROTEIN FRIGIDA-ESSENTIAL 1 343 1656 IPR052650 -
Tan09g2029 1657 MobiDBLite consensus disorder prediction 239 265 - -
Tan09g2029 1657 Gene3D Surp module 357 416 IPR035967 GO:0003723(InterPro)|GO:0006396(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g2029 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g2028 Tan-Chr9:70870137 Tan09g2029 Tan-Chr9:70870137 0.00E+00 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g457 Blo04g00798 . . . . . . . . . . Cma11g00215 Car10g00275 Car11g00194 Sed12g2017 . Cpe04g01453 Bhi02g00087 Tan09g2029 Cmetu02g1493 . Hepe09g0282 . . . . . . . . . Cone2ag0794 Cone16ag0215 . . . . . . . . . Bda14g00888 . Bpe15g00571 . . . Cmo10g00311 Cmo11g00217 . . . . . . . . . . . . . . . . . . . . . Csa01g00305 Chy02g02433 Cme02g01821
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009616 1 1 0 0 1 1 2 1 1 1 1 1 2 2 1 2 1 0 2 1 1 1 1 1 1 1 1 1 2 1 33