Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g2048 ATGGCGGCTCATTCTTCAACTTCCAGTAACGACCGAACTTTGAGAACCGCAACTTCTAATCCGTTCTTTGCGTGGAGGGAGTTTCTATGGGGAGCTATCGCTGGAGCATTTGGAGAAGGAATGATGCACCCTATTGATACCATAAAGACTCGGATTCAAAGCCAGGCTATTCTATATGGAAGTCAAAATCAAAAGACCCTGTTGCAGATGGTCAAATCGGTATGGAAAACTGACGGATTAAGGGGCTTTTATAGGGGCATAGCTCCTGGAATTACTGGTTCACTTGCCACTGGAGCTACATACTTTGGTGTCATTGAGTCCAGCAAGAAATGGATTGAAGAAACACATCCTAGCCTTGGCGGTCATTGGGCTCATTTCATTGCTGGAGCAGTTGGTGATACACTGGGTTCATTTGTATATGTTCCATGTGAAGTTATGAAGCAACGGATGCAAGTTCAAGGCACAAGGTCATCTTGGAGCTCCCTTCCCATGAAGGATAATATCTCTATGATGCACGGTGGGCAAATGTATGGCTATTATTCAGGGATGTTCCAGGCTGGTCGTTCAATCTTGAAGGAACAAGGATTAAGGGGATTGTATGCGGGATATTGGTCTACACTTGCCAGGGATGTGCCGTTTGCTGGTCTAATGGTCATGTTTTATGAGGCACTAAAAGATTTGACTGAGCATGGGAAGCAAAAATGGATGCCTAATTCAGATGTTAATAGCTCCTTGGAAGGACTTGTTTTGGGAGGATTAGCTGGTGCATGTATGGTTGGCGTTTTAATACATGGTTCTGAAATTGTTAGGTCTCAGTGCTTATCTGACCACTCCCTTGGATGTGATAAAAACAAGAATGCAAGTTCAGGGATCAACTTTCAGATGACAGAAAAGGAAGCTTGGGAGAAGCGGCGTAAACAGATCGAGACTGAATTGAATTTCTGTCCATCAGCAGAGACACATCGACCGTTGTCGAATTTTGCAGATAAACATTCTGAGCCAAAATACCACGGCACCAGAAGGAAGCACAGAATCCCTAATTCTGAGCCTTCCATGGCGTCCGGCAAGCGATGCCATTACGAGGTCCTCGGCCTCCACATCGACTCCACCGCCGACGAGATTCGATCGGCGTACAGAAAGCTAGCCCTCCAGCGCCACCCCGATAAGCTCGTCCAGTCCGGTTTGTCGCAGGCGGATGCCACCGCTCAGTTTCAAGAGCTCCAGCACGCTTACGAGGTCCTCTCCGATCCTAAGGAACGCGCCTGGTACGACTCTCATCGTTCCCAAATTCTTTTCTCTGATGCCGCATCGGTTAATTCCAACTCTGTAGTTCCGAATCTGTTTCCATTTTTCTCCAATACCGTTTATTCTGGCTATTCGGATTCTGGACGAGGGTTCTACAAGATCTATTCTGACCTTTTTGACAAAATTTACGGGAATGAGATTAATTTCGCTAAGAAATTAGGATTGCGTTTGGATATGGTTCGCGAAGCTCCGGTTATGGGGAATTTGGATAGTCCGTACACGCAGGTGACTGCGTTTTATAATTACTGGCTTGGGTTTTGTACGATTATGGATTTTTTCTGGGCTGATCAGTACGATGTTATGGCCGGTCCCAACCGGAAATCAAGGAGGCTAATGGAGGAGGATAACAAGAAGCTGAGGAAGAAGGCAAAGAGGGAGTTCAATGAGACGGTGAGAGGTTTGGCTGAGTTTGTGAAGAAGAGGGATAAGAGAGTGATTGATATGGCTATGAAAAAGAACTTGGAAATGGAGAAGAAGAAGGAAGAGGAGAGGGAAAGAAAAAAGAGGCTAGAGAGGGAGAGGATGGAGAAACTTAGGGCATATGAGGAACCAGACTGGGCAAAGGTTGAGGAGGTTGAAGAGGATGAGGACGATGGGTTCGAGGAAGAGAATGAGCGAGGGAAAGAGCTTTACTGTGTTTTATGTGGGAAAAAGTTCAAGAGTGAAAAGCAGTGGAAGAATCACGAGCAGTCAAAGAAGCACAAGGAGAAGGTTGCAGAGTTCAGAGAATCACTAGATGATGAGGATGAATCTGAAGAATTTGTTGACGAAGGAGAAGCTGAAGAAGAAACAACACTGCTGGATGATAGGATAGGTGAACTAGGAGAGCAGTTCAAGGAGAGTTTTGATATTGAAGCAGAAGAAAGTGGGGCAGAAATTAGTGGGAGCGAAAATGACGATGTTCATGAAGTTGATAGAACTCATATGGTTGCTGAGGCACTTGGATCAGATAATGATGAAACCGATGTTCTTGAAGCAATGGCAGCTGGGCTACGAAATAGGAAAAATGCAGCTTCAGTGAATCAGCCTAAAGCTTCCCCAGCCGAAGCTCAAGTTGAAAATGAGAATGATGAGCCTAATCCAGCAGAGCCCGAAAATGGTAGGAGGGGAAGAAAGAATCGTCGAGCCAAAAAGAAGGGCAAGGGAAATGATGAAGCTATGAATGAAACAGGTGCTCAAAATGACAAAAACAACAGAGACAATACATCACAACAGCAGGATTCTCCTTCCCACCCGTTGAGTAACAATGAAAGTAGTGATATGGGAGCCAGTGAGTTGGCAAAAGAACAAAGGATTTCGAGTAAACCTGCTGATCGGAAGGCAGTCGCCCAGAACGACACAAAGGCCAACCCTCGGCACTCATCTAAAGGAAAGAAGTCCAAGGCAACATCTAAGGATTCTGGCAATTCATGCGAAACATGTGGAGAGCAGTTTGAATCAAGGAATAAACTGCATAAGCACTTGGGAGCCACAGGACATGCTGCTTTAAAATATCGATAA 2805 45.38 MAAHSSTSSNDRTLRTATSNPFFAWREFLWGAIAGAFGEGMMHPIDTIKTRIQSQAILYGSQNQKTLLQMVKSVWKTDGLRGFYRGIAPGITGSLATGATYFGVIESSKKWIEETHPSLGGHWAHFIAGAVGDTLGSFVYVPCEVMKQRMQVQGTRSSWSSLPMKDNISMMHGGQMYGYYSGMFQAGRSILKEQGLRGLYAGYWSTLARDVPFAGLMVMFYEALKDLTEHGKQKWMPNSDVNSSLEGLVLGGLAGACMVGVLIHGSEIVRSQCLSDHSLGCDKNKNASSGINFQMTEKEAWEKRRKQIETELNFCPSAETHRPLSNFADKHSEPKYHGTRRKHRIPNSEPSMASGKRCHYEVLGLHIDSTADEIRSAYRKLALQRHPDKLVQSGLSQADATAQFQELQHAYEVLSDPKERAWYDSHRSQILFSDAASVNSNSVVPNLFPFFSNTVYSGYSDSGRGFYKIYSDLFDKIYGNEINFAKKLGLRLDMVREAPVMGNLDSPYTQVTAFYNYWLGFCTIMDFFWADQYDVMAGPNRKSRRLMEEDNKKLRKKAKREFNETVRGLAEFVKKRDKRVIDMAMKKNLEMEKKKEEERERKKRLERERMEKLRAYEEPDWAKVEEVEEDEDDGFEEENERGKELYCVLCGKKFKSEKQWKNHEQSKKHKEKVAEFRESLDDEDESEEFVDEGEAEEETTLLDDRIGELGEQFKESFDIEAEESGAEISGSENDDVHEVDRTHMVAEALGSDNDETDVLEAMAAGLRNRKNAASVNQPKASPAEAQVENENDEPNPAEPENGRRGRKNRRAKKKGKGNDEAMNETGAQNDKNNRDNTSQQQDSPSHPLSNNESSDMGASELAKEQRISSKPADRKAVAQNDTKANPRHSSKGKKSKATSKDSGNSCETCGEQFESRNKLHKHLGATGHAALKYR 934
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 70981795 70988990 + Tan0009348.1 Tan09g2048 764391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g2048 934 SUPERFAMILY Chaperone J-domain 339 423 IPR036869 -
Tan09g2048 934 ProSitePatterns Zinc finger C2H2 type domain signature. 906 928 IPR013087 -
Tan09g2048 934 ProSiteProfiles dnaJ domain profile. 358 427 IPR001623 -
Tan09g2048 934 SUPERFAMILY Mitochondrial carrier 23 259 IPR023395 -
Tan09g2048 934 PANTHER DNAJ PROTEIN JJJ1 HOMOLOG 352 934 IPR044648 -
Tan09g2048 934 Pfam Zinc-finger double-stranded RNA-binding 645 670 IPR022755 -
Tan09g2048 934 ProSitePatterns Nt-dnaJ domain signature. 404 423 IPR018253 -
Tan09g2048 934 PRINTS DnaJ domain signature 399 419 IPR001623 -
Tan09g2048 934 PRINTS DnaJ domain signature 378 393 IPR001623 -
Tan09g2048 934 PRINTS DnaJ domain signature 360 378 IPR001623 -
Tan09g2048 934 MobiDBLite consensus disorder prediction 770 784 - -
Tan09g2048 934 MobiDBLite consensus disorder prediction 822 858 - -
Tan09g2048 934 Pfam Mitochondrial carrier protein 123 228 IPR018108 -
Tan09g2048 934 Pfam Mitochondrial carrier protein 23 113 IPR018108 -
Tan09g2048 934 SMART dnaj_3 357 419 IPR001623 -
Tan09g2048 934 Coils Coil 581 615 - -
Tan09g2048 934 ProSitePatterns Zinc finger C2H2 type domain signature. 647 669 IPR013087 -
Tan09g2048 934 MobiDBLite consensus disorder prediction 680 699 - -
Tan09g2048 934 Pfam Zuotin-like, zuotin homology domain 494 580 IPR054076 -
Tan09g2048 934 ProSiteProfiles Solute carrier (Solcar) repeat profile. 22 111 IPR018108 -
Tan09g2048 934 ProSiteProfiles Zinc finger C2H2 type domain profile. 904 933 IPR013087 -
Tan09g2048 934 MobiDBLite consensus disorder prediction 323 353 - -
Tan09g2048 934 Coils Coil 291 311 - -
Tan09g2048 934 CDD DnaJ 358 416 IPR001623 -
Tan09g2048 934 Pfam DnaJ domain 359 424 IPR001623 -
Tan09g2048 934 MobiDBLite consensus disorder prediction 866 881 - -
Tan09g2048 934 Gene3D DnaJ domain 346 442 IPR036869 -
Tan09g2048 934 MobiDBLite consensus disorder prediction 658 699 - -
Tan09g2048 934 Coils Coil 544 564 - -
Tan09g2048 934 Gene3D Mitochondrial carrier domain 5 169 IPR023395 -
Tan09g2048 934 SMART c2h2final6 904 928 IPR013087 -
Tan09g2048 934 SMART c2h2final6 645 669 IPR013087 -
Tan09g2048 934 ProSiteProfiles Solute carrier (Solcar) repeat profile. 120 227 IPR018108 -
Tan09g2048 934 MobiDBLite consensus disorder prediction 658 679 - -
Tan09g2048 934 SUPERFAMILY beta-beta-alpha zinc fingers 635 690 IPR036236 -
Tan09g2048 934 SMART ZnF_U1_5 642 676 IPR003604 GO:0003676(InterPro)|GO:0008270(InterPro)
Tan09g2048 934 MobiDBLite consensus disorder prediction 718 742 - -
Tan09g2048 934 MobiDBLite consensus disorder prediction 768 912 - -
Tan09g2048 934 Gene3D Classic Zinc Finger 631 694 - -
Tan09g2048 934 Gene3D Mitochondrial carrier domain 170 300 IPR023395 -
Tan09g2048 934 FunFam Mitochondrial substrate carrier family protein 6 166 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan07g1643 Tan-Chr7:67832785 Tan09g2048 Tan-Chr9:70981795 1.80E-07 dispersed
Tan07g1644 Tan-Chr7:67832785 Tan09g2048 Tan-Chr9:70981795 1.80E-07 dispersed
Tan09g2048 Tan-Chr9:70981795 Tan11g1848 Tan-Chr11:21955666 5.00E-11 dispersed
Tan09g2048 Tan-Chr9:70981795 Tan06g0305 Tan-Chr6:2379756 3.70E-14 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28402 PF00153 Mito_carr 8.00E-18 No_clan Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g2048 K09506 - csv:101217729 894.034