Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan09g2048 | ATGGCGGCTCATTCTTCAACTTCCAGTAACGACCGAACTTTGAGAACCGCAACTTCTAATCCGTTCTTTGCGTGGAGGGAGTTTCTATGGGGAGCTATCGCTGGAGCATTTGGAGAAGGAATGATGCACCCTATTGATACCATAAAGACTCGGATTCAAAGCCAGGCTATTCTATATGGAAGTCAAAATCAAAAGACCCTGTTGCAGATGGTCAAATCGGTATGGAAAACTGACGGATTAAGGGGCTTTTATAGGGGCATAGCTCCTGGAATTACTGGTTCACTTGCCACTGGAGCTACATACTTTGGTGTCATTGAGTCCAGCAAGAAATGGATTGAAGAAACACATCCTAGCCTTGGCGGTCATTGGGCTCATTTCATTGCTGGAGCAGTTGGTGATACACTGGGTTCATTTGTATATGTTCCATGTGAAGTTATGAAGCAACGGATGCAAGTTCAAGGCACAAGGTCATCTTGGAGCTCCCTTCCCATGAAGGATAATATCTCTATGATGCACGGTGGGCAAATGTATGGCTATTATTCAGGGATGTTCCAGGCTGGTCGTTCAATCTTGAAGGAACAAGGATTAAGGGGATTGTATGCGGGATATTGGTCTACACTTGCCAGGGATGTGCCGTTTGCTGGTCTAATGGTCATGTTTTATGAGGCACTAAAAGATTTGACTGAGCATGGGAAGCAAAAATGGATGCCTAATTCAGATGTTAATAGCTCCTTGGAAGGACTTGTTTTGGGAGGATTAGCTGGTGCATGTATGGTTGGCGTTTTAATACATGGTTCTGAAATTGTTAGGTCTCAGTGCTTATCTGACCACTCCCTTGGATGTGATAAAAACAAGAATGCAAGTTCAGGGATCAACTTTCAGATGACAGAAAAGGAAGCTTGGGAGAAGCGGCGTAAACAGATCGAGACTGAATTGAATTTCTGTCCATCAGCAGAGACACATCGACCGTTGTCGAATTTTGCAGATAAACATTCTGAGCCAAAATACCACGGCACCAGAAGGAAGCACAGAATCCCTAATTCTGAGCCTTCCATGGCGTCCGGCAAGCGATGCCATTACGAGGTCCTCGGCCTCCACATCGACTCCACCGCCGACGAGATTCGATCGGCGTACAGAAAGCTAGCCCTCCAGCGCCACCCCGATAAGCTCGTCCAGTCCGGTTTGTCGCAGGCGGATGCCACCGCTCAGTTTCAAGAGCTCCAGCACGCTTACGAGGTCCTCTCCGATCCTAAGGAACGCGCCTGGTACGACTCTCATCGTTCCCAAATTCTTTTCTCTGATGCCGCATCGGTTAATTCCAACTCTGTAGTTCCGAATCTGTTTCCATTTTTCTCCAATACCGTTTATTCTGGCTATTCGGATTCTGGACGAGGGTTCTACAAGATCTATTCTGACCTTTTTGACAAAATTTACGGGAATGAGATTAATTTCGCTAAGAAATTAGGATTGCGTTTGGATATGGTTCGCGAAGCTCCGGTTATGGGGAATTTGGATAGTCCGTACACGCAGGTGACTGCGTTTTATAATTACTGGCTTGGGTTTTGTACGATTATGGATTTTTTCTGGGCTGATCAGTACGATGTTATGGCCGGTCCCAACCGGAAATCAAGGAGGCTAATGGAGGAGGATAACAAGAAGCTGAGGAAGAAGGCAAAGAGGGAGTTCAATGAGACGGTGAGAGGTTTGGCTGAGTTTGTGAAGAAGAGGGATAAGAGAGTGATTGATATGGCTATGAAAAAGAACTTGGAAATGGAGAAGAAGAAGGAAGAGGAGAGGGAAAGAAAAAAGAGGCTAGAGAGGGAGAGGATGGAGAAACTTAGGGCATATGAGGAACCAGACTGGGCAAAGGTTGAGGAGGTTGAAGAGGATGAGGACGATGGGTTCGAGGAAGAGAATGAGCGAGGGAAAGAGCTTTACTGTGTTTTATGTGGGAAAAAGTTCAAGAGTGAAAAGCAGTGGAAGAATCACGAGCAGTCAAAGAAGCACAAGGAGAAGGTTGCAGAGTTCAGAGAATCACTAGATGATGAGGATGAATCTGAAGAATTTGTTGACGAAGGAGAAGCTGAAGAAGAAACAACACTGCTGGATGATAGGATAGGTGAACTAGGAGAGCAGTTCAAGGAGAGTTTTGATATTGAAGCAGAAGAAAGTGGGGCAGAAATTAGTGGGAGCGAAAATGACGATGTTCATGAAGTTGATAGAACTCATATGGTTGCTGAGGCACTTGGATCAGATAATGATGAAACCGATGTTCTTGAAGCAATGGCAGCTGGGCTACGAAATAGGAAAAATGCAGCTTCAGTGAATCAGCCTAAAGCTTCCCCAGCCGAAGCTCAAGTTGAAAATGAGAATGATGAGCCTAATCCAGCAGAGCCCGAAAATGGTAGGAGGGGAAGAAAGAATCGTCGAGCCAAAAAGAAGGGCAAGGGAAATGATGAAGCTATGAATGAAACAGGTGCTCAAAATGACAAAAACAACAGAGACAATACATCACAACAGCAGGATTCTCCTTCCCACCCGTTGAGTAACAATGAAAGTAGTGATATGGGAGCCAGTGAGTTGGCAAAAGAACAAAGGATTTCGAGTAAACCTGCTGATCGGAAGGCAGTCGCCCAGAACGACACAAAGGCCAACCCTCGGCACTCATCTAAAGGAAAGAAGTCCAAGGCAACATCTAAGGATTCTGGCAATTCATGCGAAACATGTGGAGAGCAGTTTGAATCAAGGAATAAACTGCATAAGCACTTGGGAGCCACAGGACATGCTGCTTTAAAATATCGATAA | 2805 | 45.38 | MAAHSSTSSNDRTLRTATSNPFFAWREFLWGAIAGAFGEGMMHPIDTIKTRIQSQAILYGSQNQKTLLQMVKSVWKTDGLRGFYRGIAPGITGSLATGATYFGVIESSKKWIEETHPSLGGHWAHFIAGAVGDTLGSFVYVPCEVMKQRMQVQGTRSSWSSLPMKDNISMMHGGQMYGYYSGMFQAGRSILKEQGLRGLYAGYWSTLARDVPFAGLMVMFYEALKDLTEHGKQKWMPNSDVNSSLEGLVLGGLAGACMVGVLIHGSEIVRSQCLSDHSLGCDKNKNASSGINFQMTEKEAWEKRRKQIETELNFCPSAETHRPLSNFADKHSEPKYHGTRRKHRIPNSEPSMASGKRCHYEVLGLHIDSTADEIRSAYRKLALQRHPDKLVQSGLSQADATAQFQELQHAYEVLSDPKERAWYDSHRSQILFSDAASVNSNSVVPNLFPFFSNTVYSGYSDSGRGFYKIYSDLFDKIYGNEINFAKKLGLRLDMVREAPVMGNLDSPYTQVTAFYNYWLGFCTIMDFFWADQYDVMAGPNRKSRRLMEEDNKKLRKKAKREFNETVRGLAEFVKKRDKRVIDMAMKKNLEMEKKKEEERERKKRLERERMEKLRAYEEPDWAKVEEVEEDEDDGFEEENERGKELYCVLCGKKFKSEKQWKNHEQSKKHKEKVAEFRESLDDEDESEEFVDEGEAEEETTLLDDRIGELGEQFKESFDIEAEESGAEISGSENDDVHEVDRTHMVAEALGSDNDETDVLEAMAAGLRNRKNAASVNQPKASPAEAQVENENDEPNPAEPENGRRGRKNRRAKKKGKGNDEAMNETGAQNDKNNRDNTSQQQDSPSHPLSNNESSDMGASELAKEQRISSKPADRKAVAQNDTKANPRHSSKGKKSKATSKDSGNSCETCGEQFESRNKLHKHLGATGHAALKYR | 934 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 70981795 | 70988990 | + | Tan0009348.1 | Tan09g2048 | 764391 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan09g2048 | 934 | SUPERFAMILY | Chaperone J-domain | 339 | 423 | IPR036869 | - | |
Tan09g2048 | 934 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 906 | 928 | IPR013087 | - | |
Tan09g2048 | 934 | ProSiteProfiles | dnaJ domain profile. | 358 | 427 | IPR001623 | - | |
Tan09g2048 | 934 | SUPERFAMILY | Mitochondrial carrier | 23 | 259 | IPR023395 | - | |
Tan09g2048 | 934 | PANTHER | DNAJ PROTEIN JJJ1 HOMOLOG | 352 | 934 | IPR044648 | - | |
Tan09g2048 | 934 | Pfam | Zinc-finger double-stranded RNA-binding | 645 | 670 | IPR022755 | - | |
Tan09g2048 | 934 | ProSitePatterns | Nt-dnaJ domain signature. | 404 | 423 | IPR018253 | - | |
Tan09g2048 | 934 | PRINTS | DnaJ domain signature | 399 | 419 | IPR001623 | - | |
Tan09g2048 | 934 | PRINTS | DnaJ domain signature | 378 | 393 | IPR001623 | - | |
Tan09g2048 | 934 | PRINTS | DnaJ domain signature | 360 | 378 | IPR001623 | - | |
Tan09g2048 | 934 | MobiDBLite | consensus disorder prediction | 770 | 784 | - | - | |
Tan09g2048 | 934 | MobiDBLite | consensus disorder prediction | 822 | 858 | - | - | |
Tan09g2048 | 934 | Pfam | Mitochondrial carrier protein | 123 | 228 | IPR018108 | - | |
Tan09g2048 | 934 | Pfam | Mitochondrial carrier protein | 23 | 113 | IPR018108 | - | |
Tan09g2048 | 934 | SMART | dnaj_3 | 357 | 419 | IPR001623 | - | |
Tan09g2048 | 934 | Coils | Coil | 581 | 615 | - | - | |
Tan09g2048 | 934 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 647 | 669 | IPR013087 | - | |
Tan09g2048 | 934 | MobiDBLite | consensus disorder prediction | 680 | 699 | - | - | |
Tan09g2048 | 934 | Pfam | Zuotin-like, zuotin homology domain | 494 | 580 | IPR054076 | - | |
Tan09g2048 | 934 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 22 | 111 | IPR018108 | - | |
Tan09g2048 | 934 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 904 | 933 | IPR013087 | - | |
Tan09g2048 | 934 | MobiDBLite | consensus disorder prediction | 323 | 353 | - | - | |
Tan09g2048 | 934 | Coils | Coil | 291 | 311 | - | - | |
Tan09g2048 | 934 | CDD | DnaJ | 358 | 416 | IPR001623 | - | |
Tan09g2048 | 934 | Pfam | DnaJ domain | 359 | 424 | IPR001623 | - | |
Tan09g2048 | 934 | MobiDBLite | consensus disorder prediction | 866 | 881 | - | - | |
Tan09g2048 | 934 | Gene3D | DnaJ domain | 346 | 442 | IPR036869 | - | |
Tan09g2048 | 934 | MobiDBLite | consensus disorder prediction | 658 | 699 | - | - | |
Tan09g2048 | 934 | Coils | Coil | 544 | 564 | - | - | |
Tan09g2048 | 934 | Gene3D | Mitochondrial carrier domain | 5 | 169 | IPR023395 | - | |
Tan09g2048 | 934 | SMART | c2h2final6 | 904 | 928 | IPR013087 | - | |
Tan09g2048 | 934 | SMART | c2h2final6 | 645 | 669 | IPR013087 | - | |
Tan09g2048 | 934 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 120 | 227 | IPR018108 | - | |
Tan09g2048 | 934 | MobiDBLite | consensus disorder prediction | 658 | 679 | - | - | |
Tan09g2048 | 934 | SUPERFAMILY | beta-beta-alpha zinc fingers | 635 | 690 | IPR036236 | - | |
Tan09g2048 | 934 | SMART | ZnF_U1_5 | 642 | 676 | IPR003604 | GO:0003676(InterPro)|GO:0008270(InterPro) | |
Tan09g2048 | 934 | MobiDBLite | consensus disorder prediction | 718 | 742 | - | - | |
Tan09g2048 | 934 | MobiDBLite | consensus disorder prediction | 768 | 912 | - | - | |
Tan09g2048 | 934 | Gene3D | Classic Zinc Finger | 631 | 694 | - | - | |
Tan09g2048 | 934 | Gene3D | Mitochondrial carrier domain | 170 | 300 | IPR023395 | - | |
Tan09g2048 | 934 | FunFam | Mitochondrial substrate carrier family protein | 6 | 166 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan07g1643 | Tan-Chr7:67832785 | Tan09g2048 | Tan-Chr9:70981795 | 1.80E-07 | dispersed | |
Tan07g1644 | Tan-Chr7:67832785 | Tan09g2048 | Tan-Chr9:70981795 | 1.80E-07 | dispersed | |
Tan09g2048 | Tan-Chr9:70981795 | Tan11g1848 | Tan-Chr11:21955666 | 5.00E-11 | dispersed | |
Tan09g2048 | Tan-Chr9:70981795 | Tan06g0305 | Tan-Chr6:2379756 | 3.70E-14 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
28402 | PF00153 | Mito_carr | 8.00E-18 | No_clan | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan09g2048 | K09506 | - | csv:101217729 | 894.034 |