Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g2088 ATGGCGCTGTTCAGAAGGTTCTTTTACAGGAAGCCGCCGGATCGGCTTCTTGAGATCTCCGAGAGAGTCTATGTGTTTGATTGTTGCTTCTCCACGGAAGTGTTGGAGGAAGAAGAATATAAGGTCTACTTGGATGGCATTGTAGCACAGTTACAGAGCCACTTTCCCGATGCTTCTTTCATGGTTTTCAACTTCAGAGAAGGTGATAGGCGAAGTCAAATTTCTGATGTATTGACTCAGTATGATATGACAGTTATGGACTATCCTCGGCAATATGAGGGATGTCCTTTATTACCATTGGAGATGATTCACCACTTCCTTCGATCAAGTGAAAGTTGGTTATCGCTGGAGGGTCAACAGAATGTGCTATTGATGCATTGTGAAAGAGGAGGATGGCCTGTTCTTGCATTCATGCTAGCTGGTCTTCTGTTGTACAGGAAACAATACAGTGGGGAGCAGAAGACTCTTGAAATGGTCTACAAGCAAGCTCCTAAGGAACTTCTCCATCTTTTGTCTCCTTTAAACCCTCAGCCTTCCCAGATGAGATATCTTCAATACATTTCCAGGAGAAATTTAGGTTCTGATTGGCCTCCATCGGATACACCTCTAGTTTTGGATTGTTTAATACTTAGAGTTTTACCTCTTTTTGATGGGGGAAAAGGATGTAGGCCTGTTGTGCGTGTGTATGGTCAAGACCCCTCAACACCGGCCAATAGAACTTCAAAGCTTTTATTTTCAACATCAACCAAGAGAAAACATATCCGCAACTACCTACAGGCAGAGTGCATGCTGGTGAAAATTGATATTCATTGCCATGTTCAAGGGGACGTAGTTCTTGAATGCATCCATTTGGATGAAGATCTTGAACACGAGGAGATAATGTTTAGAGTTATGTTTCACACAACATTTGTTAGAACAAACATTATGGTGCTGAACCGTGATGACGTTGATGTTTTATGGGATGCGAGGGATCAGTTTCCTAAGGACTTCAAAGTTGAGGCACTCTTTTTGGATGCTGATGCTGTTGTCCCCAATCTCACCACAGCCTTTGACGATGAAGATGGAAATGAAACTGGAGCTGCTTCCCCTGAAGAATTTTTTGAGGTTGAAGAGATCTTCAGTAATGTAATGGATGGGCAGGAAGCAAAGGGGTCCAATTATCCTCAAGTGGTCAATCGTGTAGACCGTAAAGAAGATTGGAAGGAGGACTTTGATCCTCCTGCATTCCAAGATTGTGCATCTGACGATGGAAACCTTAAGCATGATAAGAAGCCAAATTTTGATGCAGTGAAGGACATTACTGTCGATGATGTGAAGTACAAGCTGGATGAAAATATATATTCTGATCTTAATGCAGTTAAGGACATTGCTGTGGATGATGGGGATATGAATTCAAATTCCTTCTTGGTTGCTGCTAATGTCCTGACCCATGTGAAAGCCCAGGGATTGGTAGATGATGCATACGAAAAATTTGAAGATATAGAAGAAAAGGATGATGGAAGAGATGCTGCACCCGAGAAATTGGAAAACAAGGTTCTGCAGAAAAAAATGAGTGCTGATGGTTCTAGACAAAAATCTGAAAAATTGCAAACACCAATCCCCAAGAAACAGCCTATTTCAAGTGGAAAACCGACCACTGATATGGGTTTATCCAAACAGAAAGTCAAACAACAAGAAACTCAAGGATTTTCTGCAAAGCAAGCAAAGCCGAATGCAGTTTCTAGGTGGATCCCTCCTAACAAAGGCTCCTATATGAATTCTATGCATGTTTCCTATCCACCTTCAAGATATAACAGTGCCCCAGCTGCTTTGGCAAGTATTGCACCGTCAAAGGATATACATGCAAATTCCAAAACAAAGGCTGCTGCCACCCTTGATTCCCTGGTTGCTACAGATGTATTTAGTGAACGAAAAAATTATAAAGTGGATTCTGTAAGGTCTTCACACTCTGCACCTGGGGAACTCATGCTTGGCCCACCATCTCCGGTTGAGCCAATTGAGGAGACATATTCTTCCTCTGAAACTTTAAAACCATCACATAGCGATCCACAACTTGAAGTAACGCCTCCCCCCCTGCCCACAAGGCCTCCCTCCCCACATTTACCATCACCCCCCGGGGCAAATGCAATACCTCCTCCACCACCCCCTTCATTGCGGCATGTAGAGTCAACATACTCTGCTCCACCACTTTCTGTGTCTTTAGCACCACCACCCATAGTTAACTCATCAAAGGCCAATAGTGAGATGGTTTTGCCTCATTCTTCTACACAACCATCATGGGAGCAAATATATTCTTCTGTTTCTACTGTAATGGTGGCTGGTTCTATACCTCATCCACCTCCACCCCCACCACCCCCACCCCCACCCCCACCTCCCTCCGTGGGCATGCCATCTACATTAAAGAATATTTTAAGTACTCCTCCTGTATCTATTTCATCTCCTCCAGCCTTTCTTCCCTCACTTGTTCCACCACCTTCACAACACCCGCCTACATCAATATGCGGTGGTAGAGCACCACCACCTCCACCACCCCCACCACCCCCACCTACTATTTCAGTTCATAGTACTTCCACACCTCCGCCCCCGGCCCCAATCATGCATGGGACATTTCCTTCACCATCTCTAGTGAAAGGACCCCACCCCACCCCCACCCCCACCCATGCATACACCACCTCCGCCACCTCCTCCCCACCACCTTCCATGTATGGAGCAGCAACTCCTCCACCCCCTTCAATGTTTGGAGCATCTCCATCTTTGATCCCTCCCATGCAGAGAGTACCCCCTCCACCCCCGATGGCTAGTGCACCCTCACCTTCGATACATGGGGGGCCACCACCTCCTCCACCCCCTCCAATGCGTGGGGCTCCTCCACCGCCGCCACCTCCACCAATGCATGGGGTTTCTCCACCACTGCCGCCTCCCATGTGTGGGGCTCCTCCTCCACCGCCACCTCCACCTATGTATGGGGCTCCTCCCCCACCCCCACCTCCACTGCATGGTGCTCCTCCGCCACCGCCACCCATGCATGGGAATCTCCCACCACCTCCACCAATGCGTGGGGCCCCTCCCCCACCGCCACCTCCTCCCATGCATGGTGGTGCCCCATCGCCACCTCCTCCCATGCATGGGGCTCCACCACCGCCACCTCCTCCAATGCGTGGGGCTCCTCCACCACCCCCACCTCCAATGCATGGGGCTCCTCCCCCACCGCCACCCCCATTTCATGGAGCCCCTCCTCCCCCACCCCCACCCGGGGGTGGTAGAGCCCCTCCACCCCCACCCCCACCCGGGGGTGGTAGAGCCCCACCCCCACCACCCCCACCCGGGGGTGGGGGAGCTCCAGCACCCCCTCCTCCCCCAGGAGGTGGTGCTCCAGCTGCACCTAGACCTCCGGGTGGACCTCCTCCACCTCCACCACTAGGTGCAAAAGGAGCAAGTGTTGCACCTCCTGACCCGAGAGGTTTGTCTGCTGGAAGGGGGCGTGGGCTATCACGCTCAAGTGCTACAGCACCTCGAAGGTCCTCCTTAAAGCCTCTACATTGGAGCAAAGTTACAAGGGCTCTGCAAGGGAGCCTGTGGGAAGAACTGCAGAGATATGGAGAGCCTCAAATTGCACCAGAGTTTGATGTGTCCGAGATAGAGACTCTCTTTTCTGCAACTGTTCCCAAACCTGCCGATGGAGGTAAATCTGGAGGGCGAAGGAAGTCTACTGGATCGAAAACTGACAAAGTCCATCTGGTTGACCTCAGGAGAGCTAATAACACTGAAATTATGCTCACCAAAGTAAAGATGCCTCTTCCGGATATGATGGCTGCTGTACTAGCAATGGACGAATCAGTATTGGATGTTGATCAGGTGGAAAATCTCATAAAGTTTTGTCCTACGAAGGAGGAGATGGAACTTCTTAAGGGATACACTGGCGACAAGGATACCCTTGGAAAGTGTGAACAGTTTTTTTTGGAGCTGATGAAAGTGCCTCGAGTGGAGTCGAAGATGAGAGTGTTTTCTTTTAAGATTCAGTTCGGCTCTCAGATATCAGAATTTAAGAAGAGTTTAAATACTGTCAACTCGGCATGTGATCAGGTTAGGAATTCTGCCAAACTGAAGGAGATTATGAAGAAAATTCTTTATCTGGGGAATACACTGAATCAAGGAACAGCGAGGGAGACACATACCCCCAAGCCCCCCAAATACTCCTTCAAAGAGATTTTATGA 4215 48.92 MALFRRFFYRKPPDRLLEISERVYVFDCCFSTEVLEEEEYKVYLDGIVAQLQSHFPDASFMVFNFREGDRRSQISDVLTQYDMTVMDYPRQYEGCPLLPLEMIHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYSGEQKTLEMVYKQAPKELLHLLSPLNPQPSQMRYLQYISRRNLGSDWPPSDTPLVLDCLILRVLPLFDGGKGCRPVVRVYGQDPSTPANRTSKLLFSTSTKRKHIRNYLQAECMLVKIDIHCHVQGDVVLECIHLDEDLEHEEIMFRVMFHTTFVRTNIMVLNRDDVDVLWDARDQFPKDFKVEALFLDADAVVPNLTTAFDDEDGNETGAASPEEFFEVEEIFSNVMDGQEAKGSNYPQVVNRVDRKEDWKEDFDPPAFQDCASDDGNLKHDKKPNFDAVKDITVDDVKYKLDENIYSDLNAVKDIAVDDGDMNSNSFLVAANVLTHVKAQGLVDDAYEKFEDIEEKDDGRDAAPEKLENKVLQKKMSADGSRQKSEKLQTPIPKKQPISSGKPTTDMGLSKQKVKQQETQGFSAKQAKPNAVSRWIPPNKGSYMNSMHVSYPPSRYNSAPAALASIAPSKDIHANSKTKAAATLDSLVATDVFSERKNYKVDSVRSSHSAPGELMLGPPSPVEPIEETYSSSETLKPSHSDPQLEVTPPPLPTRPPSPHLPSPPGANAIPPPPPPSLRHVESTYSAPPLSVSLAPPPIVNSSKANSEMVLPHSSTQPSWEQIYSSVSTVMVAGSIPHPPPPPPPPPPPPPPSVGMPSTLKNILSTPPVSISSPPAFLPSLVPPPSQHPPTSICGGRAPPPPPPPPPPPTISVHSTSTPPPPAPIMHGTFPSPSLVKGPHPTPTPTHAYTTSATSSPPPSMYGAATPPPPSMFGASPSLIPPMQRVPPPPPMASAPSPSIHGGPPPPPPPPMRGAPPPPPPPPMHGVSPPLPPPMCGAPPPPPPPPMYGAPPPPPPPLHGAPPPPPPMHGNLPPPPPMRGAPPPPPPPPMHGGAPSPPPPMHGAPPPPPPPMRGAPPPPPPPMHGAPPPPPPPFHGAPPPPPPPGGGRAPPPPPPPGGGRAPPPPPPPGGGGAPAPPPPPGGGAPAAPRPPGGPPPPPPLGAKGASVAPPDPRGLSAGRGRGLSRSSATAPRRSSLKPLHWSKVTRALQGSLWEELQRYGEPQIAPEFDVSEIETLFSATVPKPADGGKSGGRRKSTGSKTDKVHLVDLRRANNTEIMLTKVKMPLPDMMAAVLAMDESVLDVDQVENLIKFCPTKEEMELLKGYTGDKDTLGKCEQFFLELMKVPRVESKMRVFSFKIQFGSQISEFKKSLNTVNSACDQVRNSAKLKEIMKKILYLGNTLNQGTARETHTPKPPKYSFKEIL 1404
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 71256094 71268455 + Tan0003614.1 Tan09g2088 764431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g2088 1404 PANTHER FORMIN-J 1 739 IPR051144 -
Tan09g2088 1404 MobiDBLite consensus disorder prediction 771 1176 - -
Tan09g2088 1404 MobiDBLite consensus disorder prediction 514 577 - -
Tan09g2088 1404 MobiDBLite consensus disorder prediction 524 568 - -
Tan09g2088 1404 MobiDBLite consensus disorder prediction 684 719 - -
Tan09g2088 1404 Gene3D Protein tyrosine phosphatase superfamily 14 204 IPR029021 -
Tan09g2088 1404 MobiDBLite consensus disorder prediction 724 759 - -
Tan09g2088 1404 MobiDBLite consensus disorder prediction 1228 1242 - -
Tan09g2088 1404 CDD PTP_PTEN-like 16 190 - -
Tan09g2088 1404 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1166 1404 IPR015425 -
Tan09g2088 1404 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1242 1389 - -
Tan09g2088 1404 Gene3D Formin, FH2 domain 1164 1392 IPR042201 -
Tan09g2088 1404 MobiDBLite consensus disorder prediction 812 868 - -
Tan09g2088 1404 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 336 IPR035892 -
Tan09g2088 1404 MobiDBLite consensus disorder prediction 775 796 - -
Tan09g2088 1404 MobiDBLite consensus disorder prediction 884 900 - -
Tan09g2088 1404 Pfam C2 domain of PTEN tumour-suppressor protein 199 336 IPR014020 -
Tan09g2088 1404 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Tan09g2088 1404 SMART PTEN_C2_2 198 338 IPR014020 -
Tan09g2088 1404 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 13 188 IPR029021 -
Tan09g2088 1404 MobiDBLite consensus disorder prediction 666 682 - -
Tan09g2088 1404 PRINTS Proline rich extensin signature 779 800 - -
Tan09g2088 1404 PRINTS Proline rich extensin signature 808 824 - -
Tan09g2088 1404 PRINTS Proline rich extensin signature 839 864 - -
Tan09g2088 1404 PRINTS Proline rich extensin signature 703 715 - -
Tan09g2088 1404 Gene3D - 205 336 - -
Tan09g2088 1404 MobiDBLite consensus disorder prediction 635 759 - -
Tan09g2088 1404 MobiDBLite consensus disorder prediction 1219 1242 - -
Tan09g2088 1404 MobiDBLite consensus disorder prediction 901 1145 - -
Tan09g2088 1404 Pfam Formin Homology 2 Domain 1171 1388 IPR015425 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g2088 Tan-Chr9:71256094 Tan11g1841 Tan-Chr11:21780683 8.00E-154 dispersed
Tan05g2418 Tan-Chr5:75369701 Tan09g2088 Tan-Chr9:71256094 1.10E-282 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g2088 K28090 - csv:101215105 1303.12