Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan09g2110 | ATGGCCACCGTCACCACTCAAGCTTCCGCCGCCGTTTTCCGGCCATGCGCCGCCCGATCGAGGTTCCTTTCTGGGTCATCCGGTAGACTCCACCGTGAGCTGTCGGTTAAACCGGTGGCTGCTTCGTCGTTTTCATCTTTCAAGGTTGAAGCCAAGAAGGGAGAATGGTTGCCTGGTCTGCCATCTCCGGCATACTTAAATGGAAGTCTTCCGGGCGATAACGGATTTGACCCATTGGGTCTAGCGGAAGACCCAGAGAACTTGAGGTGGTATGTGCAAGCAGAGCTCGTAAACGGGCGGTGGGCGATGTTGGGTGTCGCCGGAATGCTGCTGCCGGAGGTGTTCACCAAGATCGGAATCATCAACGCCCCTCAATGGTACGACGCCGGAAAAGCAGAGTACTTCGCCTCATCTTCAACCCTGTTCGTGATCGAGTTCATCCTCTTCCATTACGTGGAAATCCGAAGATGGCAGGACATTAAAAACCCAGGCAGCGTCAACCAAGACCCCATTTTCAAACAATACAGTTTGCCCCCAAATGACGTCGGTTACCCTGGTGGCATTTTCAACCCCCTCAATTTCGCTCCTACTCTTGAAGCCAAAGAGAAGGAAATCGCCAATGGGAGACTTGCGATGTTGGCGTTTTTGGGGTTCATTGTGCAACACAATGTGACTGGGAAGGGGCCGTTTGACAACCTTTTGCAGCACATTTCTGACCCATGGCACAACACCATTATCCAAACGTTCGGTGGCAACTAA | 759 | 52.57 | MATVTTQASAAVFRPCAARSRFLSGSSGRLHRELSVKPVAASSFSSFKVEAKKGEWLPGLPSPAYLNGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIIQTFGGN | 252 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 71467726 | 71469222 | + | Tan0004502.1 | Tan09g2110 | 764453 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan09g2110 | 252 | Gene3D | Chlorophyll a/b binding protein domain | 63 | 242 | - | - | |
Tan09g2110 | 252 | PANTHER | CHLOROPHYLL A/B BINDING PROTEIN | 24 | 245 | IPR001344 | GO:0009416(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0016020(InterPro) | |
Tan09g2110 | 252 | FunFam | Chlorophyll a-b binding protein, chloroplastic | 63 | 242 | - | - | |
Tan09g2110 | 252 | SUPERFAMILY | Chlorophyll a-b binding protein | 53 | 249 | - | - | |
Tan09g2110 | 252 | Pfam | Chlorophyll A-B binding protein | 63 | 222 | IPR022796 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan02g1837 | Tan-Chr2:84416418 | Tan09g2110 | Tan-Chr9:71467726 | 3.90E-54 | dispersed | |
Tan09g2110 | Tan-Chr9:71467726 | Tan05g0624 | Tan-Chr5:4631506 | 6.70E-27 | dispersed | |
Tan02g1249 | Tan-Chr2:32299137 | Tan09g2110 | Tan-Chr9:71467726 | 2.20E-25 | transposed | |
Tan04g0044 | Tan-Chr4:410879 | Tan09g2110 | Tan-Chr9:71467726 | 2.30E-62 | transposed | |
Tan09g0704 | Tan-Chr9:56612610 | Tan09g2110 | Tan-Chr9:71467726 | 5.20E-41 | transposed | |
Tan09g1055 | Tan-Chr9:62798005 | Tan09g2110 | Tan-Chr9:71467726 | 1.20E-55 | transposed | |
Tan11g0846 | Tan-Chr11:6949329 | Tan09g2110 | Tan-Chr9:71467726 | 2.60E-39 | transposed | |
Tan05g2431 | Tan-Chr5:75463232 | Tan09g2110 | Tan-Chr9:71467726 | 2.90E-131 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan09g2110 | K08910 | - | csv:101222701 | 491.5 |