Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan09g2117 | ATGAATCCTGAAGTGTTATCAGTAGATGAAAATGATAAGCTCGCAACAAGCAAAACTGAGAAAGAACAGAATGATGCACCCAACTCAAAAGAGAAACTGAAGAAACCAGATAAAATACTTCCATGTCCCCGCTGCAATAGCATGGAAACTAAGTTTTGTTATTACAATAATTATAACGTCAATCAACCACGTCATTTTTGTAAAGCCTGTCAAAGATATTGGACTGAAGGCGGTACCATGAGGAATGTCCCTGTTGGAGCTGGCCGCCGAAAGAACAAGAACTCTGCCTCACACTACCGACACATTACGATCTCAGAGGCTCTTCAAGCTGCACAGATTGATGTTCCCAATGGGATCAACCACCTAGCATCAAAAAGCAATGGCCGAGTCCTCAATTTCAGCGTAAACGCACCTGGATGTGAATCTATGGCCACTGTCCTCAATCCTGGAGAAAGAAAGGTCTTGAATGGAACTAGGAATGAATTTCATAGATTGGAAGACCAAGGAATCAAAGCGCCTTGTAAGGGTGGGGAAACTGGCGACGATTGTTCCAGTGCATCTTCAGTGACAATGTCAAGTTCAATGGAGGAAGGAGCCAGGAGGTGCCCTCAAGAACCACAGATGCAGAACATCAATGGTTTCCCTCCTCAAATCCCATATCTTCCTGGTGTTCCTTGGCCTTGTTCATGGAATGCACCAATACCTCCACCAGCCTTTTGCCCTCCTGGAGTTCCTTTACCATTCTACCCTGCAACATATTGGAGCTGTAGCGTTCCAGGTGCTTGGAATATTCCTTGGTTCACTCCACAACCTTGTTCTCCAAACATTGGTCCGAGATCTCCGATACTCGGGAAGCATCCAAGAGATGGCGACAAACTCCAGGCTGATAATTCTGAGATGGAAGAACCTCCAAAACAGAAAAATGGATCTGTTTTGGTTCCAAAAACTTTAAGGATTGATGATCCGAACGAAGCTGCTAAGAGCTCAATATGGGAGACACTCGGTATTAAGAATGATTCAATCAAAGCTGTTGATCTGTCTAAGGTCTTCCAATCAAAGGGCGATCAAAAGAGAAACGTTTCTGAAGTGTTGTCTCCAGTTTTGCAAGCTAACCCTGCAGCCTTATCAAGATCTCTTAATTTCCACGAGCGGTCGTGA | 1158 | 44.39 | MNPEVLSVDENDKLATSKTEKEQNDAPNSKEKLKKPDKILPCPRCNSMETKFCYYNNYNVNQPRHFCKACQRYWTEGGTMRNVPVGAGRRKNKNSASHYRHITISEALQAAQIDVPNGINHLASKSNGRVLNFSVNAPGCESMATVLNPGERKVLNGTRNEFHRLEDQGIKAPCKGGETGDDCSSASSVTMSSSMEEGARRCPQEPQMQNINGFPPQIPYLPGVPWPCSWNAPIPPPAFCPPGVPLPFYPATYWSCSVPGAWNIPWFTPQPCSPNIGPRSPILGKHPRDGDKLQADNSEMEEPPKQKNGSVLVPKTLRIDDPNEAAKSSIWETLGIKNDSIKAVDLSKVFQSKGDQKRNVSEVLSPVLQANPAALSRSLNFHERS | 385 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 71476903 | 71480020 | - | Tan0021034.2 | Tan09g2117 | 764460 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan09g2117 | 385 | MobiDBLite | consensus disorder prediction | 1 | 37 | - | - | |
Tan09g2117 | 385 | MobiDBLite | consensus disorder prediction | 11 | 37 | - | - | |
Tan09g2117 | 385 | MobiDBLite | consensus disorder prediction | 170 | 189 | - | - | |
Tan09g2117 | 385 | PANTHER | CYCLIC DOF FACTOR 2 | 9 | 384 | IPR045174 | GO:0003677(PANTHER)|GO:0003700(InterPro)|GO:0003700(PANTHER)|GO:0006355(InterPro) | |
Tan09g2117 | 385 | MobiDBLite | consensus disorder prediction | 284 | 303 | - | - | |
Tan09g2117 | 385 | ProSiteProfiles | Zinc finger Dof-type profile. | 40 | 94 | IPR003851 | GO:0003677(InterPro)|GO:0006355(InterPro) | |
Tan09g2117 | 385 | Pfam | Dof domain, zinc finger | 38 | 94 | IPR003851 | GO:0003677(InterPro)|GO:0006355(InterPro) | |
Tan09g2117 | 385 | MobiDBLite | consensus disorder prediction | 278 | 311 | - | - | |
Tan09g2117 | 385 | ProSitePatterns | Zinc finger Dof-type signature. | 42 | 78 | IPR003851 | GO:0003677(InterPro)|GO:0006355(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan05g2435 | Tan-Chr5:75498270 | Tan09g2117 | Tan-Chr9:71476903 | 1.00E-107 | dispersed | |
Tan07g1176 | Tan-Chr7:42398646 | Tan09g2117 | Tan-Chr9:71476903 | 2.10E-104 | dispersed | |
Tan09g2117 | Tan-Chr9:71476903 | Tan10g1676 | Tan-Chr10:37944187 | 4.70E-56 | dispersed | |
Tan09g2116 | Tan-Chr9:71476903 | Tan09g2117 | Tan-Chr9:71476903 | 3.00E-230 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
28411 | PF02701 | zf-Dof | 1.80E-32 | No_clan | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan09g2117 | - | - | - | 0.0 |