Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g2123 ATGGGTGCCAGTGCCACTTTGAGGCCCAAGTGTGAAGAAGTCATGCCCTTTGAAGACCCTTTTCCTTTGTCATGCCATCTTTCTCCTCTCCATTTTAGAAGCTACAATTCTGCATTGGATTGGAACTGCAATAATTTTGGGTTTCAAGAGAGCATTTTTGACGTCGTTCCTTTGTTTGAGAGTTGCCCAAATGACCCTTTTTTCGACCCGAAGGATATTGAACCCGTTAACTCCTTTATACCAGAAGATGGGGTTGGAATTTGGAGTGAAATGGAGGGTGGATTTGGATTTGGGGTTGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAGGAGGCTCTATTATTGCTTGAAGGAATTAGTGGAGATCAAAATGAAAGTAATAATGGATTATTATTATTAGAGAGATCAAAAGAAGGAAGGGGCAAAAGAAAGTGCAGAGAAAGAACCAACAATAATAATGCGAGTCCATCAAAAATGCTGTCAAGAAAAACAATATCTCAGTACTTCTACATGCCCATTACTCAGGCTGCCAAAGAATTGAATGTGGGACTCACTCTTTTGAAGAAAAGATGTAGAGAATTGGGAATTAAGAGATGGCCACATAGGAAGTTGATGAGCCTCCAAACCCTAATCAAGAATGTCAAGGAGCTTAAAAAGGGAGATGGAGAGGGAAATGGAGTGAAGTTAAACAATGTATTGGAGATATTAGAGAATGAGAAGAAGTTAATGGAGGAGAGACCCGATTTGCAGTTAGAGGACAATACAAAGAGGCTTAGACAAGCCTGCTTCAAGGCAAACTACAAGAAAAGAAAGCTGTCAGGAATCAACAATTTCCAATTTTTCTCCCAAGAAGAAGAATTAGAAGAAGATGAAGAAATGAAATATCTGTTGTCGGATTGCTCCTTTTCGTCCACTAGCTGCACCCTGTTCATGTAA 939 40.36 MGASATLRPKCEEVMPFEDPFPLSCHLSPLHFRSYNSALDWNCNNFGFQESIFDVVPLFESCPNDPFFDPKDIEPVNSFIPEDGVGIWSEMEGGFGFGVEEEEEEEEEEEEEALLLLEGISGDQNESNNGLLLLERSKEGRGKRKCRERTNNNNASPSKMLSRKTISQYFYMPITQAAKELNVGLTLLKKRCRELGIKRWPHRKLMSLQTLIKNVKELKKGDGEGNGVKLNNVLEILENEKKLMEERPDLQLEDNTKRLRQACFKANYKKRKLSGINNFQFFSQEEELEEDEEMKYLLSDCSFSSTSCTLFM 312
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 71503980 71505255 - Tan0018882.1 Tan09g2123 764466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g2123 312 Coils Coil 99 119 - -
Tan09g2123 312 PANTHER PROTEIN RKD4 147 275 IPR044607 GO:0003700(InterPro)
Tan09g2123 312 Coils Coil 227 247 - -
Tan09g2123 312 Pfam RWP-RK domain 161 208 IPR003035 -
Tan09g2123 312 ProSiteProfiles RWP-RK domain profile. 137 229 IPR003035 -
Tan09g2123 312 MobiDBLite consensus disorder prediction 138 159 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0086 Tan-Chr1:957421 Tan09g2123 Tan-Chr9:71503980 1.50E-29 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28412 PF02042 RWP-RK 1.60E-21 No_clan Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g2123 - - - 0.0