Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan09g2158 | ATGGAGGCTGAAGCTTTGCCAACCACAGATGATAGAGTTCAATCAACTGGAGGAGATCATGAAGAACCTGCTGCCAAACAAAATGCTCTTCACAAGGATGATGTTCAGCATGAACAAAGAATGAAAATGGCGAAAGTTGAAATGAGTAAAGTGAGAGAAGAAAACGAGAGGCTAAAGAAGTGTTTGGATGAAATGATGAAGGATTACGAGAGCCTAAAAAGGCAGTTCCATGAGATGATGATGATGAGTCAAAAAGAAGGAAAAAAATCAACACAAACAAGTGGAAGTACCATTATTAATAATAATAATAATAATAAGGAGGAGGAGGAGGTTGAAGAAGTTGACGACATGGTTTCACTCACATTGGGAAGATTCTCAAGCGATGATCAAAACAAGATCAACGTCAGTACTTCTTCTGAAAAAAAATTAGATCATCAAAACAAAATGTTGGACCTGAAACAACATTATTATTGGGGCTCTCTTGGAGTACTTGGTGAAACAAATAATATCAAAACCCCATCAATGGATCACATTCAAACTCCATCGGACAGTGAACCTAAAGAAGAAGAAGAAGAAGCCGGACAGACTTGGCCACCGAGTAAGGTGTTCAAGGGTATGCCGCCGCCGCCGCCACCACCCGGAGAAGATGAAGTTTCTCACCAGAATCCCCCCAAGAAAGCTAGGGTTTGTGTGAGAGCTCGTTGTGATACTCCAACGTTGAACGATGGATGTCAATGGAGAAAATATGGACAAAAAATTGCAAAAGGAAATCCTTGTCCTAGAGCTTATTATCGTTGCACCGGTGCACCCTCATGTCCAGTTAGGAAACAAAGGAGTGTTGATGATATTTCAATACTAATCACCACCTATGAAGGAACTCACAACCACCCTCTGCCTGTTTCAGCCATGGCCATGGCTTCCACCACCTCTGCCGCCGCCTCGATGCTCCTCTCAGGCCCTTCCTCCTCCACGTCTCGGGCGATCGGGACCGCAGCTGCGAATCTCCATGGAATGAACTTATATCTCTCAAACAACACCATTAATTCAAAGCAATTCTACTTGCCAAACTCTTCAATGCTATCTTCTTCTCTAAACCATCCCACAATCACCTTAGACCTCACTTCAAACGTTAACCCTCCATCAACTAATTCCTCCTCCTCTCCTTTCCATAAAATCCCTTCAACTTATCCTCCAAAATATCCCTTCACCAGCCTTGATTTTGGCTCTTCTCAACACAACTTCATGTCTTGGAACAACAATAATATTAGTGGCTATAACAATAATAATAATCAACCTTATAATAATATAACCAAAAATGCAATAGGAATATCGTCATCAGACCTTGCTAAACAACTCCCTCTCCATAGTAACATCTATCAAGCCTGCCTTCAACAATTTGCCAAACCTTCAACTCCGGACACAATAGCGGCAGCAACCAAGGCAATTACGTCGGACCCGAGTTTCCAATCGGCATTGGCGGCTGCCCTCAGCTCGATCATCGGCAGCGGCGAGGCGATTCAGTCCATGTCTAGCTATGTTCAAGCAACACAGGGAAATGTGTGTGCATCAAGTTTAAGCTCTCAACAAGCAAGTATGGGGTTTCAGGCACCTCCATCATTGACATGCTCCACCTCCACCTCCAAGAGTACTCCTTCTTCGTCTCCTGGTGATAGTAGAGACAACGCCAACTGA | 1692 | 43.5 | MEAEALPTTDDRVQSTGGDHEEPAAKQNALHKDDVQHEQRMKMAKVEMSKVREENERLKKCLDEMMKDYESLKRQFHEMMMMSQKEGKKSTQTSGSTIINNNNNNKEEEEVEEVDDMVSLTLGRFSSDDQNKINVSTSSEKKLDHQNKMLDLKQHYYWGSLGVLGETNNIKTPSMDHIQTPSDSEPKEEEEEAGQTWPPSKVFKGMPPPPPPPGEDEVSHQNPPKKARVCVRARCDTPTLNDGCQWRKYGQKIAKGNPCPRAYYRCTGAPSCPVRKQRSVDDISILITTYEGTHNHPLPVSAMAMASTTSAAASMLLSGPSSSTSRAIGTAAANLHGMNLYLSNNTINSKQFYLPNSSMLSSSLNHPTITLDLTSNVNPPSTNSSSSPFHKIPSTYPPKYPFTSLDFGSSQHNFMSWNNNNISGYNNNNNQPYNNITKNAIGISSSDLAKQLPLHSNIYQACLQQFAKPSTPDTIAAATKAITSDPSFQSALAAALSSIIGSGEAIQSMSSYVQATQGNVCASSLSSQQASMGFQAPPSLTCSTSTSKSTPSSSPGDSRDNAN | 563 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 71677977 | 71682426 | - | Tan0013876.2 | Tan09g2158 | 764501 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan09g2158 | 563 | MobiDBLite | consensus disorder prediction | 87 | 113 | - | - | |
Tan09g2158 | 563 | MobiDBLite | consensus disorder prediction | 169 | 225 | - | - | |
Tan09g2158 | 563 | SUPERFAMILY | WRKY DNA-binding domain | 233 | 299 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan09g2158 | 563 | MobiDBLite | consensus disorder prediction | 14 | 35 | - | - | |
Tan09g2158 | 563 | Coils | Coil | 41 | 75 | - | - | |
Tan09g2158 | 563 | ProSiteProfiles | WRKY domain profile. | 235 | 299 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan09g2158 | 563 | MobiDBLite | consensus disorder prediction | 87 | 104 | - | - | |
Tan09g2158 | 563 | PANTHER | WRKY TRANSCRIPTION FACTOR 36-RELATED | 27 | 504 | IPR044810 | GO:0003700(InterPro) | |
Tan09g2158 | 563 | MobiDBLite | consensus disorder prediction | 202 | 218 | - | - | |
Tan09g2158 | 563 | Pfam | WRKY DNA -binding domain | 241 | 297 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan09g2158 | 563 | MobiDBLite | consensus disorder prediction | 532 | 563 | - | - | |
Tan09g2158 | 563 | SMART | WRKY_cls | 240 | 298 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan09g2158 | 563 | Gene3D | WRKY domain | 225 | 300 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan09g2158 | 563 | MobiDBLite | consensus disorder prediction | 1 | 35 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan05g2089 | Tan-Chr5:71364311 | Tan09g2158 | Tan-Chr9:71677977 | 1.10E-88 | dispersed | |
Tan09g2158 | Tan-Chr9:71677977 | Tan11g0459 | Tan-Chr11:3714800 | 3.70E-17 | dispersed | |
Tan09g2157 | Tan-Chr9:71677977 | Tan09g2158 | Tan-Chr9:71677977 | 5.90E-276 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
28419 | PF03106 | WRKY | 4.40E-20 | CL0274 | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan09g2158 | - | - | - | 0.0 |