Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g2158 ATGGAGGCTGAAGCTTTGCCAACCACAGATGATAGAGTTCAATCAACTGGAGGAGATCATGAAGAACCTGCTGCCAAACAAAATGCTCTTCACAAGGATGATGTTCAGCATGAACAAAGAATGAAAATGGCGAAAGTTGAAATGAGTAAAGTGAGAGAAGAAAACGAGAGGCTAAAGAAGTGTTTGGATGAAATGATGAAGGATTACGAGAGCCTAAAAAGGCAGTTCCATGAGATGATGATGATGAGTCAAAAAGAAGGAAAAAAATCAACACAAACAAGTGGAAGTACCATTATTAATAATAATAATAATAATAAGGAGGAGGAGGAGGTTGAAGAAGTTGACGACATGGTTTCACTCACATTGGGAAGATTCTCAAGCGATGATCAAAACAAGATCAACGTCAGTACTTCTTCTGAAAAAAAATTAGATCATCAAAACAAAATGTTGGACCTGAAACAACATTATTATTGGGGCTCTCTTGGAGTACTTGGTGAAACAAATAATATCAAAACCCCATCAATGGATCACATTCAAACTCCATCGGACAGTGAACCTAAAGAAGAAGAAGAAGAAGCCGGACAGACTTGGCCACCGAGTAAGGTGTTCAAGGGTATGCCGCCGCCGCCGCCACCACCCGGAGAAGATGAAGTTTCTCACCAGAATCCCCCCAAGAAAGCTAGGGTTTGTGTGAGAGCTCGTTGTGATACTCCAACGTTGAACGATGGATGTCAATGGAGAAAATATGGACAAAAAATTGCAAAAGGAAATCCTTGTCCTAGAGCTTATTATCGTTGCACCGGTGCACCCTCATGTCCAGTTAGGAAACAAAGGAGTGTTGATGATATTTCAATACTAATCACCACCTATGAAGGAACTCACAACCACCCTCTGCCTGTTTCAGCCATGGCCATGGCTTCCACCACCTCTGCCGCCGCCTCGATGCTCCTCTCAGGCCCTTCCTCCTCCACGTCTCGGGCGATCGGGACCGCAGCTGCGAATCTCCATGGAATGAACTTATATCTCTCAAACAACACCATTAATTCAAAGCAATTCTACTTGCCAAACTCTTCAATGCTATCTTCTTCTCTAAACCATCCCACAATCACCTTAGACCTCACTTCAAACGTTAACCCTCCATCAACTAATTCCTCCTCCTCTCCTTTCCATAAAATCCCTTCAACTTATCCTCCAAAATATCCCTTCACCAGCCTTGATTTTGGCTCTTCTCAACACAACTTCATGTCTTGGAACAACAATAATATTAGTGGCTATAACAATAATAATAATCAACCTTATAATAATATAACCAAAAATGCAATAGGAATATCGTCATCAGACCTTGCTAAACAACTCCCTCTCCATAGTAACATCTATCAAGCCTGCCTTCAACAATTTGCCAAACCTTCAACTCCGGACACAATAGCGGCAGCAACCAAGGCAATTACGTCGGACCCGAGTTTCCAATCGGCATTGGCGGCTGCCCTCAGCTCGATCATCGGCAGCGGCGAGGCGATTCAGTCCATGTCTAGCTATGTTCAAGCAACACAGGGAAATGTGTGTGCATCAAGTTTAAGCTCTCAACAAGCAAGTATGGGGTTTCAGGCACCTCCATCATTGACATGCTCCACCTCCACCTCCAAGAGTACTCCTTCTTCGTCTCCTGGTGATAGTAGAGACAACGCCAACTGA 1692 43.5 MEAEALPTTDDRVQSTGGDHEEPAAKQNALHKDDVQHEQRMKMAKVEMSKVREENERLKKCLDEMMKDYESLKRQFHEMMMMSQKEGKKSTQTSGSTIINNNNNNKEEEEVEEVDDMVSLTLGRFSSDDQNKINVSTSSEKKLDHQNKMLDLKQHYYWGSLGVLGETNNIKTPSMDHIQTPSDSEPKEEEEEAGQTWPPSKVFKGMPPPPPPPGEDEVSHQNPPKKARVCVRARCDTPTLNDGCQWRKYGQKIAKGNPCPRAYYRCTGAPSCPVRKQRSVDDISILITTYEGTHNHPLPVSAMAMASTTSAAASMLLSGPSSSTSRAIGTAAANLHGMNLYLSNNTINSKQFYLPNSSMLSSSLNHPTITLDLTSNVNPPSTNSSSSPFHKIPSTYPPKYPFTSLDFGSSQHNFMSWNNNNISGYNNNNNQPYNNITKNAIGISSSDLAKQLPLHSNIYQACLQQFAKPSTPDTIAAATKAITSDPSFQSALAAALSSIIGSGEAIQSMSSYVQATQGNVCASSLSSQQASMGFQAPPSLTCSTSTSKSTPSSSPGDSRDNAN 563
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 71677977 71682426 - Tan0013876.2 Tan09g2158 764501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g2158 563 MobiDBLite consensus disorder prediction 87 113 - -
Tan09g2158 563 MobiDBLite consensus disorder prediction 169 225 - -
Tan09g2158 563 SUPERFAMILY WRKY DNA-binding domain 233 299 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan09g2158 563 MobiDBLite consensus disorder prediction 14 35 - -
Tan09g2158 563 Coils Coil 41 75 - -
Tan09g2158 563 ProSiteProfiles WRKY domain profile. 235 299 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan09g2158 563 MobiDBLite consensus disorder prediction 87 104 - -
Tan09g2158 563 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 27 504 IPR044810 GO:0003700(InterPro)
Tan09g2158 563 MobiDBLite consensus disorder prediction 202 218 - -
Tan09g2158 563 Pfam WRKY DNA -binding domain 241 297 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan09g2158 563 MobiDBLite consensus disorder prediction 532 563 - -
Tan09g2158 563 SMART WRKY_cls 240 298 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan09g2158 563 Gene3D WRKY domain 225 300 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan09g2158 563 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g2089 Tan-Chr5:71364311 Tan09g2158 Tan-Chr9:71677977 1.10E-88 dispersed
Tan09g2158 Tan-Chr9:71677977 Tan11g0459 Tan-Chr11:3714800 3.70E-17 dispersed
Tan09g2157 Tan-Chr9:71677977 Tan09g2158 Tan-Chr9:71677977 5.90E-276 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28419 PF03106 WRKY 4.40E-20 CL0274 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g2158 - - - 0.0