Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g2164 ATGGGTCTTTTCATTTGGGTCTTCTCCGTGATTTTCGCGGCAACCCTTTTGAGCCACCGCTCCTTTTCTCTCACTGAAGATGGTTTGACATTGTTAGAAATCAAAAGTACTTTGAATGACACTAAGAACGTCCTCAGTAATTGGATCCCTTCAGATGAATCTCCCTGCAAATGGACTGGTATCTCTTGCCATCCCCAGGATTCTCGAGTCAGCTCAATTAATCTACCATTCATGCAACTAGGAGGGATTATATCTCCCAGCATTGGTAAACTTAGCAGATTGCAGAGACTGGCTCTCCACCAGAACGGATTACATGGATATATCCCCAATGAACTTGCCAATTGTTCTGAACTTAGAGCCCTGTACCTGAGGGCAAATTATCTTCAAGGTGGCATACCATCAAATATTGGAAACCTTTCTTACCTTACCATACTTGATTTATCATGCAATTCCTTTAAGGGAAGTATACCATCATCAATTGGTCGTCTCACACATTTGCGCAATCTGAATTTATCGACCAACTTTTTCTTTGGAGAAATCCCAGATATTGGAGTTTTAAGCACCTTTGGGAACGACTCGTTCCTTGGTAATCAAGATCTCTGTGGCCGGCAAGTAAACAAGCCATGTCGGACCTCACTGGGGTTTCCTGTCGTTTTACCACATGCTGAAAGTGATGAAGCTCCAGTTCCTGTGAAACGATCCTCTCATTACATCAAAGGACTGTTGATCGGTGCAATATCGACAGCGGGGTTTGTGTTGGTCATACTTCTTGTATTCATGTGGACTCGCTTCCTTTCGAAGAAAGAAAGAACTGCAAAGAGTTACATGGAAGTTAAGAAGCAAAATAATCGTGAATCAAGTGTGAAGCTCATTACGTTCCATGGCGATCTACTGTACCCAACGTCTGAGATCATAGAAAAGCTGGAGGCCCTTAAAGAAACCCATGTTGTTGGGTCAGGAGGGTTTGGCACAGTGTATCGGATGGTCATGAATGATTGTGGAGCGTTTGCTGTAAAGAAAATTGATAGGACTCAAGATGGTTCAGACCAAGTTGTTGAAAGGGAATTGGAGATATTGGGAAGCATTAAACACATAAATTTAGTGAAATTGCGTGGTTATTGCAGGCTTCCTTCTTCAAAGCTTCTTATATATGACTATCTGGCAGCGGGTAGCTTGGATGATTTCTTACATGAACATGGACCAGAAAAGGTTTTGGATTGGAGTGCTAGGTTAAACGTAGCCCTAGGCTCCGCTCGAGGACTGGCGTACTTGCACCATGACTGCTGTCCAAAGATTGTGCACTGCAACATAAAATCCAGCAACATTCTTCTTGACGAGAACTTAGAGCCACACGTATCCGACTTTGGTCTTGCAAAGCTTTCAGTTGATGGGGATTCCCATGTCACAACTGTTGTTGCTGGCACATTTGGTTATTTGGCTCCAGAATACTTGCAAAGTGGGATAGGAACTGAGAAGTCTGATGTTTATAGCTTTGGAGTTCTCTTGCTGGAGCTTGTAACAGGGAAGAGACCTAGTGATCCGTTTTTCTCAAAGAGGGGCTTAAATGTTGTTGGTTGGTTGAACACGCTGCGCGGAGAAGACCAATTGGACAACATAGTAGATAGTAAGTGCAAGAATGCAGATGTCGAAACTGTAGAAGCGATTCTCGAAATAGCGGCGAGGTGCACGGATGGCAACCCAACCATGCGGCCTACAATGAACCAAGTATTGCAGCTGCTAGAGCAAGAGGTAATGTCGCCCTACCCAAGTGATTACTCCGAGTCTCATTCGGATTATTCGTGA 1803 43.87 MGLFIWVFSVIFAATLLSHRSFSLTEDGLTLLEIKSTLNDTKNVLSNWIPSDESPCKWTGISCHPQDSRVSSINLPFMQLGGIISPSIGKLSRLQRLALHQNGLHGYIPNELANCSELRALYLRANYLQGGIPSNIGNLSYLTILDLSCNSFKGSIPSSIGRLTHLRNLNLSTNFFFGEIPDIGVLSTFGNDSFLGNQDLCGRQVNKPCRTSLGFPVVLPHAESDEAPVPVKRSSHYIKGLLIGAISTAGFVLVILLVFMWTRFLSKKERTAKSYMEVKKQNNRESSVKLITFHGDLLYPTSEIIEKLEALKETHVVGSGGFGTVYRMVMNDCGAFAVKKIDRTQDGSDQVVERELEILGSIKHINLVKLRGYCRLPSSKLLIYDYLAAGSLDDFLHEHGPEKVLDWSARLNVALGSARGLAYLHHDCCPKIVHCNIKSSNILLDENLEPHVSDFGLAKLSVDGDSHVTTVVAGTFGYLAPEYLQSGIGTEKSDVYSFGVLLLELVTGKRPSDPFFSKRGLNVVGWLNTLRGEDQLDNIVDSKCKNADVETVEAILEIAARCTDGNPTMRPTMNQVLQLLEQEVMSPYPSDYSESHSDYS 600
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 71719720 71723642 - Tan0013480.1 Tan09g2164 764507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g2164 600 Gene3D Ribonuclease Inhibitor 25 211 IPR032675 -
Tan09g2164 600 Gene3D Phosphorylase Kinase; domain 1 270 386 - -
Tan09g2164 600 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 24 186 - -
Tan09g2164 600 ProSiteProfiles Protein kinase domain profile. 311 585 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g2164 600 Pfam Leucine Rich Repeat 142 163 IPR001611 GO:0005515(InterPro)
Tan09g2164 600 Pfam Leucine Rich Repeat 118 139 IPR001611 GO:0005515(InterPro)
Tan09g2164 600 SUPERFAMILY Protein kinase-like (PK-like) 288 586 IPR011009 -
Tan09g2164 600 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 387 591 - -
Tan09g2164 600 Pfam Leucine rich repeat N-terminal domain 25 63 IPR013210 -
Tan09g2164 600 ProSitePatterns Protein kinases ATP-binding region signature. 317 340 IPR017441 GO:0005524(InterPro)
Tan09g2164 600 SUPERFAMILY L domain-like 25 189 - -
Tan09g2164 600 Pfam Protein kinase domain 313 578 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g2164 600 Gene3D Transferase(Phosphotransferase) domain 1 387 592 - -
Tan09g2164 600 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 178 583 IPR050647 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g4113 Tan-Chr1:105970613 Tan09g2164 Tan-Chr9:71719720 5.30E-132 dispersed
Tan01g4240 Tan-Chr1:107205316 Tan09g2164 Tan-Chr9:71719720 2.20E-76 dispersed
Tan09g2164 Tan-Chr9:71719720 Tan10g1711 Tan-Chr10:43391278 1.20E-69 dispersed
Tan05g2077 Tan-Chr5:71201561 Tan09g2164 Tan-Chr9:71719720 1.90E-224 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68096 PF00069 Pkinase 1.30E-44 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g2164 - - - 0.0