Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan09g2171 | ATGGGGCGTAAGAAGAAAAACATTGATCCGCGTTCTAAACAATCTCCGACGGCTCGAGGAGTCGTCGTTGATGGCCCAAGTTCAGGGAACGCCGCCGACCAGAGTTCAGTGCCTGATCAGGTTAGTAATCACAACCAAAGTGGGATCGAGCCGGTGCTTATCAATGAATCGGATGGCTCGTCTTCTTCCACAATTAAACTCGAATGCGAGCGGGCTCTTACCGCGCTTCGGCGTGGGAACCACACTAAGGCACTGAGGCTTATGAAGGAGTTGAGCTCCAGAAATGAGAACTCTGTTCACTCTGCATTGATTCATCGGGTTCAGGGTACTATTTGTGTAAAGGTAGCATCGATTATTGACGACCTGAATACGAAGCAGCGGCATTTGAAGAATGCGATTGAGTCTGCTCGTAAAGCAGTCGAGCTCTCACCTTACTCGATTGAGTTTTCACATTTCTATGCAAATTTGCTGTACGAGGTTGCCAATGATGCGAAGGAGTATGAGGAGGTGGTGCAAGAGTGTGAGCGGGCTCTTGGCATTGAAAATCCAATCGATCCCGCTAAGGAAAGCTTGCAGGATGAAAAGGATCAGAAGATACCTACTGCCGAAGCGCGAATTACACACGTTCAGACTGAATTGAGGCAGTTAATTCAAAAGTCAAATATATATTCTATATCATCTTGGATGAAGAACTTGGGTAACGGGGAGGAGAAGTTTAGGTTGATTCCGATTAGAAGAGTGACAGAGGACCCAATGGAGGTGAGGTTGGTTCAGGCTAGAAGGGCAAACGAAATTAAGAAGGCAACCAAGACGCCTGAGGAGCGAAGGAAGGAGATTGAAGTCCGTGTTGCTGCTGCAAGGCTTCTGCAACAGAAATCTGAGACATCTCAAATGCAAACCGAAGAAGGTAAAGCTGATCGGACCCTAGATTCATCTTCAGGGTCTGGTACAAGAGTTGGTGAGCGGCGGAAACATGGCAATTTACGGAAACTGGGATCTTCAGCTGAAAGGAGGGATTGGGTTCATTCTTTTTGGAATTCCATGAGTATAGAAGCAAAGAAAGATTTGCTTAAGATCAAGATAAGTGATCTTAAGACTCATTTTAGTTCTTCAAAGGATGCTTCAGCGAATGAAGTTATTTCAGAAGCTTTGTCCTTTTATGAGGCCAATAAAACATGGAAATTTTGGATTTGCTGCAGATGTGATAAGAAATTTGTGGATTCGGAATCCCATATGCACCATGTGGTACAGGAGCACATGGGTAACCTTTTGCCGAAAATGCAATCTATTTTGCCGCAGAATGTTGACAATGTATGGACCGAAATGCTTCTTAAATGCTCTTGGAAACCATTGGATGTTTCAGCTGCAGCTAAAATGCTCACAGATCAAACAAAATGCAAAGATTCCGAGTTGGTTGAAGATATCTTCTCACAGCATCATTCAAAATGTGATAACTCTTTCAAGGATGCATGGGATTCTTCTTCAGAGAAGCATAATTGTGGGGATTGTTTAAAAGAATGCGAGCTCTATGAAAAATTTACCAATGACGGATTTAAGACCTATCATGAAAACCAGGGTTCTGTGGCATCATATTCCTTATCTGACAGCTTTCCAGTATCTGATGACTCTGAGCGTACAAAGCTTCTCGAGAAAATTCATGCGACATTTGAGTTGCTTATTAGACATAAATATCTTGCTGCAAGCCATCTTAACAAGGTTATGCAATTTACAGTGGATGAGTTACAGGGTCTTGCTTCTGGAACTCATCTTCTAAACCAGGGTCTGGACCAAACACCAGTATGTATTTGCTTTCTAGGTGCTTCTCAGCTTAGGAAAATCCTCAAGTTTTTGCAAGAATTATCTCAGTCTTGTGGTATTGGTAGATATTCTGATAAAAGTACTGGTCAAATTGAGGATTCAAAGAGTGATAAACAAACTGTCAAGGTCAAAGAGAAAGTTGTTCTCAATGAAGATGCGTCACTTCTCCTCCTCAATGAGTGTTTTCTGTCATCTGATATTCCTGATGCTATTGGTCAGGTTGCAGCCACAGATCATATGTCTGCTGCAACTGCTAAGGATGTTACTGCCAATGTGGTTCTCTCTGGTGTTGATCCCTTTCTATCCTGGATCTATGCAGGTCCATCTAGTGGGGAACAGTTGGCATCATGGGTACAAACAAAGGAAGAAAAGATACAGCGACGAACGGAAATTTTTCAAATGCTTGAGAAGGAATTTTACCATCTGCAGAGCCTTTGTGAGAGAAAATGTGAGCATTTGAACTACGAGGAAGCATTGCAGTCAGTGGAGGATCTCTGCTTTGAGGAGGGCAAGAAGAGGGAAGCTTTGAATGAATTTATCCCCAAGAGTTACGAGTCAGTCCTGAGGAAGCGAAGAGAGGAGCTTATTGAGGCTGAAAATGACGTGATGTTTATCGGCAGTAGGCTTGAGTTAGATGCTGTAACTAATGTTTTGAAAGAAGCTGAAGCTCTGAATGTTAATCAATTTGGATACGAGGAAACTTTTGCCAGCGTGCCTCCTCAGTTATGTGATCTGGAATCTGGTGAAGATGAAGATTGGAGGGCTAAGGATTACTTGCATCAAGTTGATACTTGTATAGAAGTTGCAATACAGAGACAGAAAGAACAGTTATCTATTGAGATTAGCAAAATTGATGCACGTATCATGCGAAATGTTACTGGAATGCAACAGTTGGAACTCAAGCTCGAACCTGTTTCTGCACATGATTATCAATCAATATTGCTGCCTCTTGTAAACTCATACTTGAGGGCACATTTAGAAGATTTGGCTGAAAAAGATGCCACGAGAAAGTCTGATGCTGCAAGAGAAGCATTTTTAGCTGAACTGGCACTGGATTCAAAAAAGGGTATTAAAGGAGGAAGTGATAATTCAAGACATGCACATGAAAAGTCAAAGGAAAAGAAAAGAAGCAAGGAGTTTAGGAAAGCCAAGGACTCTAAGGTGGTCACTGGTCCCGAGCAGGATGTGCTTCATGATGAGGCTGTTGATGGAGAGACCTTTCAAGCTTCATCTGATGGCGATGCTGCAGAGGTGGACATTGCTGTTTCTGAGAATGATGATGCTTTAAGACTACAGGAGGAAGAGTTTAGACGCAAAATTGAGCTGGAAGCTGATGAAAGAAAGCTGGAAGAGACTTTGGAGTATCAAAGACGAATTGAGAATGAGGCTAAACAAAAGCATCTGGCTGAACTACAAAAGAAATCTGCCCAGACAAGTCATGATAATCTCACTGGACTTGTCCCCAATGTTGAGAGTGCTGATGAGCATTTTAAAGCTTCTGTGGTGGATCAACTGGCAGAAAATGATTTGGTTCCCGACTTGTCTGGGAATGATCCTGCCACGCGAAATGCTTTGTCAGGTGTATCCAATGTAGGAGTTCTAGAGAATAGTCTGCCGTCTTCTGACAGGAGGAAGGGGAGGAAAGGTAGACGACACAAGGTTTTACCATCTGATAAGGATAATGTAGCCTTTGACAACCAATTGAATGAGCAAGTTAGATATCATGACAATCTCCTGGTAGATAGTGTTAATCCACTTTCTGAAGAGGATAGTACAAAGACTTTGAGACAACTACGTGTGGAGGATGAAGAGGAAAGATTTCAAGCTGATCTTAAGAAGGCTGTACGCCAGAGCCTTGATGCATTTCAAGAACAGCAGAAATTACCCTTGATTACGAGTTCCAGGACACCATTGATCAGTTATGGTGGAGTGGATACTAATAGTCCTCCATTAAATGAACTCAATGTAGAAAATGTGCAGGGAGCAGATATATTTGGTACAGGACTTAAGAATGAAGTTGGCGAATACAATTGCTTTCTGAATGTGATTATTCAGTCATTATGGCATTTAAGACGGTTTCGAGAAGAGTTCCTGAGTAGATCTATGACTGAGCATGTTCACGTTGGGGATCCCTGCGTTGTTTGTGCATTATATGAAATATTTGCTGCCTTGAGCATGGCATCTGCAGATTCTAAAAGAGAAGCAGTCGCCCCCACTTCTTTGAGAATAGCTCTGAGCAATCTTTGTCCTGATAGTAGTTTCTTCCAAGAGGGTCAGATGAATGATGCCTCTGAAGTGCTGGCAGTCATATTTGATTGCCTACACCAGTCATTGACTCCTAGTTCGAGCGTTTCTGATACAGAATCAGTAGAAAGCAATTGCATGGAGTCTTGGGACTGTGCAAGTGACACCTGTTTGGTGCATTCCATCTTTGGAATGGACATTTTTGAACGAATGAATTGCAACAGTTGTGGCCTGGAATCTAGACATCTGAAGTACACTTCCTTCTTTCACAATATAAATGCTAGTGCTCTTCGAACAATGAAGGTTATGTGTACTGAAAGCTCCTTCGATGAACTTCTGAATGTTGTTGAAATGAATCATCAGCTAGCTTGTGATCCGGATGTTGGTGGTTGTGGAAAGCTCAATTACATTCATCACTTTCTCTCTGCACCACCACATGTGTTCACAACAGTCTTGGGCTGGCAGAACACTTGTGAGAATGCTGATGACATCACAGCGACATTAGCTGCTCTAAGTACTGAGATAGATATCAGTGTTCTTTATCGGGGTCTAGATCCAAAGAATACCCATAATTTGGTATCGGTGGTTTGCTATTATGGTCAACACTATCATTGTTTTGCCTACAGCCATGACAAGAAATGCTGGATAATGTATGATGATAGAACCGTTAAGGTAATTGGTGGCTGGGCTGATGTTCTTTCCATGTGTGAAAAAGGACACTTGCAACCTCAGGTTCTTTTCTTTGAAGCTGTAAATTAG | 4821 | 42.34 | MGRKKKNIDPRSKQSPTARGVVVDGPSSGNAADQSSVPDQVSNHNQSGIEPVLINESDGSSSSTIKLECERALTALRRGNHTKALRLMKELSSRNENSVHSALIHRVQGTICVKVASIIDDLNTKQRHLKNAIESARKAVELSPYSIEFSHFYANLLYEVANDAKEYEEVVQECERALGIENPIDPAKESLQDEKDQKIPTAEARITHVQTELRQLIQKSNIYSISSWMKNLGNGEEKFRLIPIRRVTEDPMEVRLVQARRANEIKKATKTPEERRKEIEVRVAAARLLQQKSETSQMQTEEGKADRTLDSSSGSGTRVGERRKHGNLRKLGSSAERRDWVHSFWNSMSIEAKKDLLKIKISDLKTHFSSSKDASANEVISEALSFYEANKTWKFWICCRCDKKFVDSESHMHHVVQEHMGNLLPKMQSILPQNVDNVWTEMLLKCSWKPLDVSAAAKMLTDQTKCKDSELVEDIFSQHHSKCDNSFKDAWDSSSEKHNCGDCLKECELYEKFTNDGFKTYHENQGSVASYSLSDSFPVSDDSERTKLLEKIHATFELLIRHKYLAASHLNKVMQFTVDELQGLASGTHLLNQGLDQTPVCICFLGASQLRKILKFLQELSQSCGIGRYSDKSTGQIEDSKSDKQTVKVKEKVVLNEDASLLLLNECFLSSDIPDAIGQVAATDHMSAATAKDVTANVVLSGVDPFLSWIYAGPSSGEQLASWVQTKEEKIQRRTEIFQMLEKEFYHLQSLCERKCEHLNYEEALQSVEDLCFEEGKKREALNEFIPKSYESVLRKRREELIEAENDVMFIGSRLELDAVTNVLKEAEALNVNQFGYEETFASVPPQLCDLESGEDEDWRAKDYLHQVDTCIEVAIQRQKEQLSIEISKIDARIMRNVTGMQQLELKLEPVSAHDYQSILLPLVNSYLRAHLEDLAEKDATRKSDAAREAFLAELALDSKKGIKGGSDNSRHAHEKSKEKKRSKEFRKAKDSKVVTGPEQDVLHDEAVDGETFQASSDGDAAEVDIAVSENDDALRLQEEEFRRKIELEADERKLEETLEYQRRIENEAKQKHLAELQKKSAQTSHDNLTGLVPNVESADEHFKASVVDQLAENDLVPDLSGNDPATRNALSGVSNVGVLENSLPSSDRRKGRKGRRHKVLPSDKDNVAFDNQLNEQVRYHDNLLVDSVNPLSEEDSTKTLRQLRVEDEEERFQADLKKAVRQSLDAFQEQQKLPLITSSRTPLISYGGVDTNSPPLNELNVENVQGADIFGTGLKNEVGEYNCFLNVIIQSLWHLRRFREEFLSRSMTEHVHVGDPCVVCALYEIFAALSMASADSKREAVAPTSLRIALSNLCPDSSFFQEGQMNDASEVLAVIFDCLHQSLTPSSSVSDTESVESNCMESWDCASDTCLVHSIFGMDIFERMNCNSCGLESRHLKYTSFFHNINASALRTMKVMCTESSFDELLNVVEMNHQLACDPDVGGCGKLNYIHHFLSAPPHVFTTVLGWQNTCENADDITATLAALSTEIDISVLYRGLDPKNTHNLVSVVCYYGQHYHCFAYSHDKKCWIMYDDRTVKVIGGWADVLSMCEKGHLQPQVLFFEAVN | 1606 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 71778184 | 71787065 | + | Tan0020003.1 | Tan09g2171 | 764514 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan09g2171 | 1606 | Pfam | Protein of unknown function (DUF629) | 341 | 874 | IPR006865 | - | |
| Tan09g2171 | 1606 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 398 | 419 | IPR013087 | - | |
| Tan09g2171 | 1606 | Gene3D | Cysteine proteinases | 1263 | 1606 | - | - | |
| Tan09g2171 | 1606 | Coils | Coil | 119 | 139 | - | - | |
| Tan09g2171 | 1606 | Coils | Coil | 1048 | 1068 | - | - | |
| Tan09g2171 | 1606 | MobiDBLite | consensus disorder prediction | 28 | 45 | - | - | |
| Tan09g2171 | 1606 | MobiDBLite | consensus disorder prediction | 1139 | 1164 | - | - | |
| Tan09g2171 | 1606 | SUPERFAMILY | Cysteine proteinases | 1273 | 1603 | IPR038765 | - | |
| Tan09g2171 | 1606 | MobiDBLite | consensus disorder prediction | 290 | 332 | - | - | |
| Tan09g2171 | 1606 | MobiDBLite | consensus disorder prediction | 964 | 1007 | - | - | |
| Tan09g2171 | 1606 | CDD | Peptidase_C19 | 1365 | 1603 | - | - | |
| Tan09g2171 | 1606 | Pfam | Protein of unknown function (DUF627) | 72 | 181 | IPR006866 | - | |
| Tan09g2171 | 1606 | Gene3D | Tetratricopeptide repeat domain | 61 | 204 | IPR011990 | GO:0005515(InterPro) | |
| Tan09g2171 | 1606 | MobiDBLite | consensus disorder prediction | 317 | 332 | - | - | |
| Tan09g2171 | 1606 | PANTHER | UBIQUITIN SPECIFIC PROTEINASE | 1 | 1604 | IPR052398 | - | |
| Tan09g2171 | 1606 | Pfam | Ubiquitin carboxyl-terminal hydrolase | 1274 | 1601 | IPR001394 | GO:0004843(InterPro)|GO:0016579(InterPro) | |
| Tan09g2171 | 1606 | MobiDBLite | consensus disorder prediction | 1 | 45 | - | - | |
| Tan09g2171 | 1606 | MobiDBLite | consensus disorder prediction | 962 | 1007 | - | - | |
| Tan09g2171 | 1606 | ProSiteProfiles | Ubiquitin specific protease (USP) domain profile. | 1273 | 1605 | IPR028889 | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan09g2171 | - | - | - | 0.0 |