Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g2184 ATGGTGTCTGCATCCACTCGTCAGAAAAACATGCACTCCCTTCTTGCGGCCAAACTAACGAAACTGACGATCCCTTCTTCTTCTTCTTCTTCTACTTCTCCTTCTTCTTCATCCACAGCCGCCCTTCATGACTTTGATTTCTCCGACGTATTTGGCCCCACAAATCCCCCTCCGTCATCTTTTCCGGGGGACCCACATCACCATGAACAACCAGAGGTAATTCATAACAGATCTCACTCATTTGTGGGTCCGTCTCCACGGTTAACTTCCCCTTCTTCCCTTCCTTTTTTCCGAGAAGTCGATTCACAGAGCGAGGAGGAGGGGGAGGAGGAGGAAGAGGACCTACAAATCTCGACTGTCAATGGAGCTCTAAAGGAGGAGGAGGTGGGTGAAAGTGAAAATGGTGATGGAGAAAATGTACAGGCGAAAATTGGGGTTGCAGATTTTGATATTCTTCGAGTGGTGGGAAAAGGAGCGTTTGGGAAGGTCTTTTTGGTGAGGAAGAAAGGGGATTGTAAAGGAAACGGTCTCAATAATGATGGGATTTATGCCATGAAAGTGATGAGGAAGGATACCATTATAAAGAAGAATCATGTCGACTATATGAAGGCTGAGAGAGATATTCTCACAAAAGTTGCGCACCCTTTCATTGTTCAACTCCGCTACTCTTTCCAGACCAAATCAAAACTTTATTTGATTCTTGATTTCATAAATGGGGGACATCTCTTTTTCCATCTGTACCGGCAGGGGATCTTCAGTGAGGATCAAGCAAGGGTCTATGCTGCTGAGATTGTATCAGCTGTTTCGCATCTTCACCACTGCGGCATTGTGCACCGGGATCTCAAGCCTGAGAACATTCTCATGGATGCTGATGGCCATGTAGTGCTTACAGATTTTGGACTGGCCAAGGAAATTGATGAATCGAGTCGGTCGAATTCGTTGTGTGGAACAACAGAATACATGGCTCCAGAAATCTTGCTTTCTAAAGGTCACAACAAAGATGCTGATTGGTGGAGCGTTGGAGTTCTATTGTATGAAATGCTTAGTGGCCAGCCACCGTTCACACACGCTAATAGAAAGAAGCTTCAAGAAAGAATAATCAAAGAGAAAGTGAAACTTCCACCATACCTGAGCACTGAAGCTCACTCTTTGCTCAGAGGGCTGTTACAAAAGGAGCCTTCTAAAAGATTAGGTAGCGGACCCAATGGAGGGGCCGAGATAAAAAGTCATAAATGGTTTCGACCGGTGAACTGGAAGAAATTGGAATGTAGGGATCTGCAACCAAAATTCAAGCCGGATGTCAATGGAAATGACTGCACAGCAAATTTCGATAACTGTTGGACAGCGATGCCCCCAGACGACTCGCCAGCTCCAACGCCAACCGACGGTGGACACTTCCAGGGATATACTTATGTTGCCCCGAACCCGTGGCTTTCATCATCATCGGGATAG 1452 46.07 MVSASTRQKNMHSLLAAKLTKLTIPSSSSSSTSPSSSSTAALHDFDFSDVFGPTNPPPSSFPGDPHHHEQPEVIHNRSHSFVGPSPRLTSPSSLPFFREVDSQSEEEGEEEEEDLQISTVNGALKEEEVGESENGDGENVQAKIGVADFDILRVVGKGAFGKVFLVRKKGDCKGNGLNNDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVAHPFIVQLRYSFQTKSKLYLILDFINGGHLFFHLYRQGIFSEDQARVYAAEIVSAVSHLHHCGIVHRDLKPENILMDADGHVVLTDFGLAKEIDESSRSNSLCGTTEYMAPEILLSKGHNKDADWWSVGVLLYEMLSGQPPFTHANRKKLQERIIKEKVKLPPYLSTEAHSLLRGLLQKEPSKRLGSGPNGGAEIKSHKWFRPVNWKKLECRDLQPKFKPDVNGNDCTANFDNCWTAMPPDDSPAPTPTDGGHFQGYTYVAPNPWLSSSSG 483
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 71899468 71902368 + Tan0002215.1 Tan09g2184 764527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g2184 483 ProSiteProfiles AGC-kinase C-terminal domain profile. 414 481 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g2184 483 ProSitePatterns Serine/Threonine protein kinases active-site signature. 276 288 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan09g2184 483 MobiDBLite consensus disorder prediction 82 99 - -
Tan09g2184 483 Gene3D Transferase(Phosphotransferase) domain 1 237 432 - -
Tan09g2184 483 ProSiteProfiles Protein kinase domain profile. 149 413 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g2184 483 MobiDBLite consensus disorder prediction 22 43 - -
Tan09g2184 483 Pfam Protein kinase C terminal domain 434 471 IPR017892 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g2184 483 FunFam Non-specific serine/threonine protein kinase 146 260 - -
Tan09g2184 483 MobiDBLite consensus disorder prediction 22 120 - -
Tan09g2184 483 ProSitePatterns Protein kinases ATP-binding region signature. 155 186 IPR017441 GO:0005524(InterPro)
Tan09g2184 483 FunFam Non-specific serine/threonine protein kinase 237 432 - -
Tan09g2184 483 PANTHER RIBOSOMAL PROTEIN S6 KINASE 107 475 - -
Tan09g2184 483 Gene3D Phosphorylase Kinase; domain 1 147 455 - -
Tan09g2184 483 SMART pkinase_C_6 414 473 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g2184 483 SMART serkin_6 149 413 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g2184 483 Pfam Protein kinase domain 151 413 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g2184 483 SUPERFAMILY Protein kinase-like (PK-like) 148 476 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g0666 Tan-Chr4:5690139 Tan09g2184 Tan-Chr9:71899468 6.60E-55 dispersed
Tan08g2248 Tan-Chr8:73977320 Tan09g2184 Tan-Chr9:71899468 3.80E-132 dispersed
Tan09g1117 Tan-Chr9:63474173 Tan09g2184 Tan-Chr9:71899468 2.00E-53 dispersed
Tan09g1118 Tan-Chr9:63474173 Tan09g2184 Tan-Chr9:71899468 3.40E-44 dispersed
Tan09g2184 Tan-Chr9:71899468 Tan10g0325 Tan-Chr10:2709173 2.80E-42 dispersed
Tan09g2184 Tan-Chr9:71899468 Tan02g0526 Tan-Chr2:4728862 2.00E-56 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68097 PF00069 Pkinase 2.10E-71 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g2184 K04688 - csv:101214867 839.336