Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan09g2184 | ATGGTGTCTGCATCCACTCGTCAGAAAAACATGCACTCCCTTCTTGCGGCCAAACTAACGAAACTGACGATCCCTTCTTCTTCTTCTTCTTCTACTTCTCCTTCTTCTTCATCCACAGCCGCCCTTCATGACTTTGATTTCTCCGACGTATTTGGCCCCACAAATCCCCCTCCGTCATCTTTTCCGGGGGACCCACATCACCATGAACAACCAGAGGTAATTCATAACAGATCTCACTCATTTGTGGGTCCGTCTCCACGGTTAACTTCCCCTTCTTCCCTTCCTTTTTTCCGAGAAGTCGATTCACAGAGCGAGGAGGAGGGGGAGGAGGAGGAAGAGGACCTACAAATCTCGACTGTCAATGGAGCTCTAAAGGAGGAGGAGGTGGGTGAAAGTGAAAATGGTGATGGAGAAAATGTACAGGCGAAAATTGGGGTTGCAGATTTTGATATTCTTCGAGTGGTGGGAAAAGGAGCGTTTGGGAAGGTCTTTTTGGTGAGGAAGAAAGGGGATTGTAAAGGAAACGGTCTCAATAATGATGGGATTTATGCCATGAAAGTGATGAGGAAGGATACCATTATAAAGAAGAATCATGTCGACTATATGAAGGCTGAGAGAGATATTCTCACAAAAGTTGCGCACCCTTTCATTGTTCAACTCCGCTACTCTTTCCAGACCAAATCAAAACTTTATTTGATTCTTGATTTCATAAATGGGGGACATCTCTTTTTCCATCTGTACCGGCAGGGGATCTTCAGTGAGGATCAAGCAAGGGTCTATGCTGCTGAGATTGTATCAGCTGTTTCGCATCTTCACCACTGCGGCATTGTGCACCGGGATCTCAAGCCTGAGAACATTCTCATGGATGCTGATGGCCATGTAGTGCTTACAGATTTTGGACTGGCCAAGGAAATTGATGAATCGAGTCGGTCGAATTCGTTGTGTGGAACAACAGAATACATGGCTCCAGAAATCTTGCTTTCTAAAGGTCACAACAAAGATGCTGATTGGTGGAGCGTTGGAGTTCTATTGTATGAAATGCTTAGTGGCCAGCCACCGTTCACACACGCTAATAGAAAGAAGCTTCAAGAAAGAATAATCAAAGAGAAAGTGAAACTTCCACCATACCTGAGCACTGAAGCTCACTCTTTGCTCAGAGGGCTGTTACAAAAGGAGCCTTCTAAAAGATTAGGTAGCGGACCCAATGGAGGGGCCGAGATAAAAAGTCATAAATGGTTTCGACCGGTGAACTGGAAGAAATTGGAATGTAGGGATCTGCAACCAAAATTCAAGCCGGATGTCAATGGAAATGACTGCACAGCAAATTTCGATAACTGTTGGACAGCGATGCCCCCAGACGACTCGCCAGCTCCAACGCCAACCGACGGTGGACACTTCCAGGGATATACTTATGTTGCCCCGAACCCGTGGCTTTCATCATCATCGGGATAG | 1452 | 46.07 | MVSASTRQKNMHSLLAAKLTKLTIPSSSSSSTSPSSSSTAALHDFDFSDVFGPTNPPPSSFPGDPHHHEQPEVIHNRSHSFVGPSPRLTSPSSLPFFREVDSQSEEEGEEEEEDLQISTVNGALKEEEVGESENGDGENVQAKIGVADFDILRVVGKGAFGKVFLVRKKGDCKGNGLNNDGIYAMKVMRKDTIIKKNHVDYMKAERDILTKVAHPFIVQLRYSFQTKSKLYLILDFINGGHLFFHLYRQGIFSEDQARVYAAEIVSAVSHLHHCGIVHRDLKPENILMDADGHVVLTDFGLAKEIDESSRSNSLCGTTEYMAPEILLSKGHNKDADWWSVGVLLYEMLSGQPPFTHANRKKLQERIIKEKVKLPPYLSTEAHSLLRGLLQKEPSKRLGSGPNGGAEIKSHKWFRPVNWKKLECRDLQPKFKPDVNGNDCTANFDNCWTAMPPDDSPAPTPTDGGHFQGYTYVAPNPWLSSSSG | 483 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 71899468 | 71902368 | + | Tan0002215.1 | Tan09g2184 | 764527 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan09g2184 | 483 | ProSiteProfiles | AGC-kinase C-terminal domain profile. | 414 | 481 | IPR000961 | GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan09g2184 | 483 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 276 | 288 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan09g2184 | 483 | MobiDBLite | consensus disorder prediction | 82 | 99 | - | - | |
Tan09g2184 | 483 | Gene3D | Transferase(Phosphotransferase) domain 1 | 237 | 432 | - | - | |
Tan09g2184 | 483 | ProSiteProfiles | Protein kinase domain profile. | 149 | 413 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan09g2184 | 483 | MobiDBLite | consensus disorder prediction | 22 | 43 | - | - | |
Tan09g2184 | 483 | Pfam | Protein kinase C terminal domain | 434 | 471 | IPR017892 | GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan09g2184 | 483 | FunFam | Non-specific serine/threonine protein kinase | 146 | 260 | - | - | |
Tan09g2184 | 483 | MobiDBLite | consensus disorder prediction | 22 | 120 | - | - | |
Tan09g2184 | 483 | ProSitePatterns | Protein kinases ATP-binding region signature. | 155 | 186 | IPR017441 | GO:0005524(InterPro) | |
Tan09g2184 | 483 | FunFam | Non-specific serine/threonine protein kinase | 237 | 432 | - | - | |
Tan09g2184 | 483 | PANTHER | RIBOSOMAL PROTEIN S6 KINASE | 107 | 475 | - | - | |
Tan09g2184 | 483 | Gene3D | Phosphorylase Kinase; domain 1 | 147 | 455 | - | - | |
Tan09g2184 | 483 | SMART | pkinase_C_6 | 414 | 473 | IPR000961 | GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan09g2184 | 483 | SMART | serkin_6 | 149 | 413 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan09g2184 | 483 | Pfam | Protein kinase domain | 151 | 413 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan09g2184 | 483 | SUPERFAMILY | Protein kinase-like (PK-like) | 148 | 476 | IPR011009 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan04g0666 | Tan-Chr4:5690139 | Tan09g2184 | Tan-Chr9:71899468 | 6.60E-55 | dispersed | |
Tan08g2248 | Tan-Chr8:73977320 | Tan09g2184 | Tan-Chr9:71899468 | 3.80E-132 | dispersed | |
Tan09g1117 | Tan-Chr9:63474173 | Tan09g2184 | Tan-Chr9:71899468 | 2.00E-53 | dispersed | |
Tan09g1118 | Tan-Chr9:63474173 | Tan09g2184 | Tan-Chr9:71899468 | 3.40E-44 | dispersed | |
Tan09g2184 | Tan-Chr9:71899468 | Tan10g0325 | Tan-Chr10:2709173 | 2.80E-42 | dispersed | |
Tan09g2184 | Tan-Chr9:71899468 | Tan02g0526 | Tan-Chr2:4728862 | 2.00E-56 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
68097 | PF00069 | Pkinase | 2.10E-71 | CL0016 | Tan | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan09g2184 | K04688 | - | csv:101214867 | 839.336 |