Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g2194 ATGGCGACGGCTGGAGAGCTCTTCCGCCGCAACCCCACCGACGAACTTCTTGTTGGGGTGTCCGATGATTCCAATCAGAGTAGTTCGCGGCAGCTTCATGTTCTTGCTGTTGATGATAGCCTCGTCGATCGCAAGGTTATTGAGCGATTGCTGAAGATCTCGTCGTGTAAAGTGACTGCTGTTGAGAGTGGGAGAAGTGCTTTGCAATATCTGGGGTTGGATGGTGAAACTAGTTCTGTCCAGTTTAATGACTTGGAAGTGAATCTCATCATCACAGATTACTCCATGCCTGAAATGACAGGATATGAACTTCTCAAGAAGATCAAGGAATCATCGGCTTTCAGGGAGATTCCTGTTGTGATAATGTCGTCAGAGAACATTTTAGCTCGAATAGACAATTGCTTGAAGGAAGGGGCTGAAGAGTTCATTGTGAAGCCTGTGAAACTGTCTGATGTGAAACGATTGAAAGATTTCATTATGAAAGGAGAGAATGAGGGGAGTAAAATTGGTCTCAAAAGGAAGCTCCATCCTGATCACGAACTCCACCCCTTGTCTCCGGAGTCTCCGACGCTGTCATCGGTGTCGGCTTTCGACCATTGCCAAGGATTTCTGCCACAATCACCGCTGCCATCGTCACGACGGTCGCCGATCATATGTTCATCAAAGAAACCTAGGTTCATCAATGGCGACTAA 693 47.04 MATAGELFRRNPTDELLVGVSDDSNQSSSRQLHVLAVDDSLVDRKVIERLLKISSCKVTAVESGRSALQYLGLDGETSSVQFNDLEVNLIITDYSMPEMTGYELLKKIKESSAFREIPVVIMSSENILARIDNCLKEGAEEFIVKPVKLSDVKRLKDFIMKGENEGSKIGLKRKLHPDHELHPLSPESPTLSSVSAFDHCQGFLPQSPLPSSRRSPIICSSKKPRFINGD 230
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 71968697 71970446 - Tan0009259.1 Tan09g2194 764537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g2194 230 PANTHER TWO-COMPONENT RESPONSE REGULATOR 26 187 IPR045279 GO:0009736(InterPro)
Tan09g2194 230 SMART REC_2 32 156 IPR001789 GO:0000160(InterPro)
Tan09g2194 230 SUPERFAMILY CheY-like 31 155 IPR011006 -
Tan09g2194 230 ProSiteProfiles Response regulatory domain profile. 33 160 IPR001789 GO:0000160(InterPro)
Tan09g2194 230 Gene3D - 31 192 - -
Tan09g2194 230 CDD REC_typeA_ARR 34 155 - -
Tan09g2194 230 Pfam Response regulator receiver domain 34 152 IPR001789 GO:0000160(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g2096 Tan-Chr9:71348710 Tan09g2194 Tan-Chr9:71968697 1.10E-07 dispersed
Tan09g2194 Tan-Chr9:71968697 Tan11g1593 Tan-Chr11:14982887 5.20E-34 dispersed
Tan01g3993 Tan-Chr1:104864493 Tan09g2194 Tan-Chr9:71968697 2.00E-32 transposed
Tan03g0466 Tan-Chr3:56768163 Tan09g2194 Tan-Chr9:71968697 3.30E-40 transposed
Tan04g0532 Tan-Chr4:4565364 Tan09g2194 Tan-Chr9:71968697 2.40E-42 transposed
Tan04g1444 Tan-Chr4:16954915 Tan09g2194 Tan-Chr9:71968697 2.10E-38 transposed
Tan08g1252 Tan-Chr8:38118784 Tan09g2194 Tan-Chr9:71968697 1.30E-39 transposed
Tan11g1266 Tan-Chr11:10792753 Tan09g2194 Tan-Chr9:71968697 3.30E-36 transposed
Tan04g1168 Tan-Chr4:10930635 Tan09g2194 Tan-Chr9:71968697 3.40E-46 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28425 PF00072 Response_reg 5.00E-21 CL0304 Tan TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g2194 K14492 - csv:101214143 317.775