Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan09g2198 | ATGGCGACTCCTATTCCTAGCCGGCAGCTTTTCATCGATGGCGAGTGGAAGGAACCAGTTCTCAAGAAACGCATCCCCGTCGTCAACCCTACTACTGAAGAAATTATCGGATCTATTCCCGCGGCTACTGCGGAAGATGTAGAGTTAGCTGTAGGTGCTGCCAGAAGAGCCCTTGCGAGGAATAAAGGCAAAGATTGGGCCTCTGCTTCGGGGGCTGTTCGTGCTAAGTATTTGCGTGCTATTGCTGCTAAGATAACAGAGAGGAAATCAGAATTAGCAAAGCTTGAAACAATAGACTGCGGAAAACCTCTGGACGAAGCTGCATGGGACATCGATGATGTTGCTGGGTGCTTCGAATACTATGCAGATCTTGCCGATGGGCTGGATGCAAAGCAAAAAGCTCCTGTTTCCCTACCCATGGATACATTTAAGAGCTATGTTCTTAAAGAACCCATTGGAGTTGTTGGGTTGATTACCCCTTGGAACTATCCTCTATTGATGGCTGCATGGAAAGTTGCACCTGCCTTGGCTGCTGGGTGTGCTGCAATATTGAAGCCATCAGAATTGGCATCTGTCACCTGTTTGGAACTGGCCGAAATCTGTAAAGATGTTGGTCTTCCACCTGGCATTTTGAATATTCTGACAGGATTGGGCCCTGAGGCTGGTGCTCCTCTAGCATCTCATCCTCACGTTGACAAGATTGCATTTACTGGGAGTGGTGCTACTGGAAGCAAGATTATGACAGCAGCTGCTCAACTTGTCAAGCCTGTTACCCTGGAACTTGGTGGAAAAAGTCCAATTGTTATTTTTGAGGATGTCGATCTCGATAAGGCTGCCGAATGGACTGCCTTTGGTTGCTTTTGGACAAACGGTCAGATTTGTAGTGCCACATCCCGTCTACTTCTACATGAAAGCATTGCTGATGAATTCTTGGATAAGCTCGTACAATGGTGCAAGAACATTAAGATTTCAGATCCTTTAGAAGAAGGTTGCAGGCTTGGTCCTGTTGTTAGTGCAGGACAGTATGAGAAGGCATTGAAGTTTGTTTCAACCGCTGAGAGTGAAGGTGCAAAGATTCTATTTGGTGGAGTTCGCCCTAAGCACCTAAAGAAGGGATACTTCCTTGAACCAGCCATTATTACTAATGTTACAACCTCCATGCAAATATGGAGAGAAGAAGTCTTTGGACCTGTTCTATGTGTAAAGACTTTTAGTTCTGAAGATGAAGCCATCGAATTAGCAAATGATACAATATATGGGCTGGGTGCTGCTGTGATATCAAATGATTTAGAAAGGTGTGAGCGTGTAACCAAGGCTTTACAGGCAGGAATTGTGTGGATTAATTGCTCCCAACCATGCTTCACTCAAGCCCCATGGGGAGGCAACAAACGCAGTGGCTTTGGTCGAGAACTAGGGGAATGGGGGCTTGATAACTATCTGACTGTAAAGCAGGTTACACAGTATGTATCCGATGAACCATGGGGATGGTACAAATCTCCTTCTAAACTGTAA | 1512 | 45.7 | MATPIPSRQLFIDGEWKEPVLKKRIPVVNPTTEEIIGSIPAATAEDVELAVGAARRALARNKGKDWASASGAVRAKYLRAIAAKITERKSELAKLETIDCGKPLDEAAWDIDDVAGCFEYYADLADGLDAKQKAPVSLPMDTFKSYVLKEPIGVVGLITPWNYPLLMAAWKVAPALAAGCAAILKPSELASVTCLELAEICKDVGLPPGILNILTGLGPEAGAPLASHPHVDKIAFTGSGATGSKIMTAAAQLVKPVTLELGGKSPIVIFEDVDLDKAAEWTAFGCFWTNGQICSATSRLLLHESIADEFLDKLVQWCKNIKISDPLEEGCRLGPVVSAGQYEKALKFVSTAESEGAKILFGGVRPKHLKKGYFLEPAIITNVTTSMQIWREEVFGPVLCVKTFSSEDEAIELANDTIYGLGAAVISNDLERCERVTKALQAGIVWINCSQPCFTQAPWGGNKRSGFGRELGEWGLDNYLTVKQVTQYVSDEPWGWYKSPSKL | 503 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 71992034 | 71997822 | - | Tan0021957.1 | Tan09g2198 | 764541 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan09g2198 | 503 | ProSitePatterns | Aldehyde dehydrogenases cysteine active site. | 287 | 298 | IPR016160 | GO:0016491(InterPro) | |
Tan09g2198 | 503 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 2 | 267 | 458 | IPR016163 | GO:0016620(InterPro) | |
Tan09g2198 | 503 | FunFam | Betaine aldehyde dehydrogenase | 263 | 454 | - | - | |
Tan09g2198 | 503 | FunFam | NAD/NADP-dependent betaine aldehyde dehydrogenase | 12 | 278 | - | - | |
Tan09g2198 | 503 | PANTHER | BETAINE ALDEHYDE DEHYDROGENASE | 1 | 502 | - | - | |
Tan09g2198 | 503 | CDD | ALDH_F10_BADH | 27 | 487 | - | - | |
Tan09g2198 | 503 | ProSitePatterns | Aldehyde dehydrogenases glutamic acid active site. | 259 | 266 | IPR029510 | GO:0016491(InterPro) | |
Tan09g2198 | 503 | SUPERFAMILY | ALDH-like | 5 | 488 | IPR016161 | GO:0016491(InterPro) | |
Tan09g2198 | 503 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 1 | 24 | 483 | IPR016162 | GO:0016491(InterPro) | |
Tan09g2198 | 503 | Pfam | Aldehyde dehydrogenase family | 23 | 485 | IPR015590 | GO:0016491(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan03g1777 | Tan-Chr3:73510572 | Tan09g2198 | Tan-Chr9:71992034 | 1.70E-42 | dispersed | |
Tan06g0122 | Tan-Chr6:1136290 | Tan09g2198 | Tan-Chr9:71992034 | 3.40E-46 | dispersed | |
Tan06g0123 | Tan-Chr6:1136290 | Tan09g2198 | Tan-Chr9:71992034 | 3.40E-46 | dispersed | |
Tan06g2750 | Tan-Chr6:79791525 | Tan09g2198 | Tan-Chr9:71992034 | 5.10E-57 | dispersed | |
Tan09g2198 | Tan-Chr9:71992034 | Tan09g2233 | Tan-Chr9:72300960 | 3.60E-96 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan09g2198 | K00130 | - | csv:101213657 | 936.021 |