Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g2198 ATGGCGACTCCTATTCCTAGCCGGCAGCTTTTCATCGATGGCGAGTGGAAGGAACCAGTTCTCAAGAAACGCATCCCCGTCGTCAACCCTACTACTGAAGAAATTATCGGATCTATTCCCGCGGCTACTGCGGAAGATGTAGAGTTAGCTGTAGGTGCTGCCAGAAGAGCCCTTGCGAGGAATAAAGGCAAAGATTGGGCCTCTGCTTCGGGGGCTGTTCGTGCTAAGTATTTGCGTGCTATTGCTGCTAAGATAACAGAGAGGAAATCAGAATTAGCAAAGCTTGAAACAATAGACTGCGGAAAACCTCTGGACGAAGCTGCATGGGACATCGATGATGTTGCTGGGTGCTTCGAATACTATGCAGATCTTGCCGATGGGCTGGATGCAAAGCAAAAAGCTCCTGTTTCCCTACCCATGGATACATTTAAGAGCTATGTTCTTAAAGAACCCATTGGAGTTGTTGGGTTGATTACCCCTTGGAACTATCCTCTATTGATGGCTGCATGGAAAGTTGCACCTGCCTTGGCTGCTGGGTGTGCTGCAATATTGAAGCCATCAGAATTGGCATCTGTCACCTGTTTGGAACTGGCCGAAATCTGTAAAGATGTTGGTCTTCCACCTGGCATTTTGAATATTCTGACAGGATTGGGCCCTGAGGCTGGTGCTCCTCTAGCATCTCATCCTCACGTTGACAAGATTGCATTTACTGGGAGTGGTGCTACTGGAAGCAAGATTATGACAGCAGCTGCTCAACTTGTCAAGCCTGTTACCCTGGAACTTGGTGGAAAAAGTCCAATTGTTATTTTTGAGGATGTCGATCTCGATAAGGCTGCCGAATGGACTGCCTTTGGTTGCTTTTGGACAAACGGTCAGATTTGTAGTGCCACATCCCGTCTACTTCTACATGAAAGCATTGCTGATGAATTCTTGGATAAGCTCGTACAATGGTGCAAGAACATTAAGATTTCAGATCCTTTAGAAGAAGGTTGCAGGCTTGGTCCTGTTGTTAGTGCAGGACAGTATGAGAAGGCATTGAAGTTTGTTTCAACCGCTGAGAGTGAAGGTGCAAAGATTCTATTTGGTGGAGTTCGCCCTAAGCACCTAAAGAAGGGATACTTCCTTGAACCAGCCATTATTACTAATGTTACAACCTCCATGCAAATATGGAGAGAAGAAGTCTTTGGACCTGTTCTATGTGTAAAGACTTTTAGTTCTGAAGATGAAGCCATCGAATTAGCAAATGATACAATATATGGGCTGGGTGCTGCTGTGATATCAAATGATTTAGAAAGGTGTGAGCGTGTAACCAAGGCTTTACAGGCAGGAATTGTGTGGATTAATTGCTCCCAACCATGCTTCACTCAAGCCCCATGGGGAGGCAACAAACGCAGTGGCTTTGGTCGAGAACTAGGGGAATGGGGGCTTGATAACTATCTGACTGTAAAGCAGGTTACACAGTATGTATCCGATGAACCATGGGGATGGTACAAATCTCCTTCTAAACTGTAA 1512 45.7 MATPIPSRQLFIDGEWKEPVLKKRIPVVNPTTEEIIGSIPAATAEDVELAVGAARRALARNKGKDWASASGAVRAKYLRAIAAKITERKSELAKLETIDCGKPLDEAAWDIDDVAGCFEYYADLADGLDAKQKAPVSLPMDTFKSYVLKEPIGVVGLITPWNYPLLMAAWKVAPALAAGCAAILKPSELASVTCLELAEICKDVGLPPGILNILTGLGPEAGAPLASHPHVDKIAFTGSGATGSKIMTAAAQLVKPVTLELGGKSPIVIFEDVDLDKAAEWTAFGCFWTNGQICSATSRLLLHESIADEFLDKLVQWCKNIKISDPLEEGCRLGPVVSAGQYEKALKFVSTAESEGAKILFGGVRPKHLKKGYFLEPAIITNVTTSMQIWREEVFGPVLCVKTFSSEDEAIELANDTIYGLGAAVISNDLERCERVTKALQAGIVWINCSQPCFTQAPWGGNKRSGFGRELGEWGLDNYLTVKQVTQYVSDEPWGWYKSPSKL 503
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 71992034 71997822 - Tan0021957.1 Tan09g2198 764541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g2198 503 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 287 298 IPR016160 GO:0016491(InterPro)
Tan09g2198 503 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 267 458 IPR016163 GO:0016620(InterPro)
Tan09g2198 503 FunFam Betaine aldehyde dehydrogenase 263 454 - -
Tan09g2198 503 FunFam NAD/NADP-dependent betaine aldehyde dehydrogenase 12 278 - -
Tan09g2198 503 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 1 502 - -
Tan09g2198 503 CDD ALDH_F10_BADH 27 487 - -
Tan09g2198 503 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 259 266 IPR029510 GO:0016491(InterPro)
Tan09g2198 503 SUPERFAMILY ALDH-like 5 488 IPR016161 GO:0016491(InterPro)
Tan09g2198 503 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 24 483 IPR016162 GO:0016491(InterPro)
Tan09g2198 503 Pfam Aldehyde dehydrogenase family 23 485 IPR015590 GO:0016491(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g1777 Tan-Chr3:73510572 Tan09g2198 Tan-Chr9:71992034 1.70E-42 dispersed
Tan06g0122 Tan-Chr6:1136290 Tan09g2198 Tan-Chr9:71992034 3.40E-46 dispersed
Tan06g0123 Tan-Chr6:1136290 Tan09g2198 Tan-Chr9:71992034 3.40E-46 dispersed
Tan06g2750 Tan-Chr6:79791525 Tan09g2198 Tan-Chr9:71992034 5.10E-57 dispersed
Tan09g2198 Tan-Chr9:71992034 Tan09g2233 Tan-Chr9:72300960 3.60E-96 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g2198 K00130 - csv:101213657 936.021