Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g2205 ATGTTCGCATATTTGTATATCTTTTGTTGTCTCTCGCGCCGCATGTTGGTCTTTTTAGTTCATTGTAATCTTCGGCAATTCCACCGCATCGTCCTGTGTCTGTATGTCTTCTTGCCTCCTATGTCGTCGCAGAAAAGAAACCCAGATGATGGAGATGCTCCGGCGGATGGTGACAATCCCGATGATAAGCGTAGAAAGTTTAGTTTTTGGAGTGTGGTTCGCGAGGCACGGTCATTGCAATTAACACAACAACTATTGGAGCCACTCATTCGTAAAGTGGTAAGGGAGGAGGTTGAATTGGCTCTTAGAAAGTACATTACCAATGTGCAAAGGAATGATGAAAATGATGATAAAGAAATCTATTCTTCCGGGCCAAGATGCTTTCGATTGAAGTTCGTAACTGATATGTCTCTCCCGGTATTTACTGGAGCTCGCATTGAAGGAAGAGATGGTTCCAACTTGAGGGTGGCTTTGATTGATACACTAAGTGGGAAAATTGTTGACACTGGGCCTCAGTCCTCAGCGAAAGTGGAAATTGTAGTGCTCGAGGGTGATTTTGAGGGTGGAGGTGATAATTACACTATAGAGGAGTTTAAGAATAACATTGTAAGAGAGAGGGAAGGAAAGAAACCACTTCTTACAGGAGATACATTTGTGAATCTCAAAGATGGAATTGGTTTGGTAGGCGAGATTTCTTTCACTGATAATTCAAGCTGGACTAGAAGCCGTCGGTTCAGGCTGGGTGCAAGAATTATAGATGAAAATGATGGAACGAGAGTACTAGAAGCAAAGACTGCATCATTTGTAGTCAGGGATCACCGTGGAGAATTGTACAAGAAGCACCACCCTCCATATCTGCAAGATGAAGTATGGAGATTGCAGAAAATTAGCAAAGATGGAGCCTATCACAAGCGCCTGAGCCAAGAAAAAATCGAGACGGTGCAAGATTTCTTAACTCTACTTTACGTACAACCTTCAAGGCTTCGTAATGTACTTGGCCCCGGTATGTCTACCAAAATGTGGGAAGCTACAATTGAGCATGCACAGACATGTGTGCTTGATAAGAAGCTTTACGTGTACAAACCTCGTGATTTGGAACAGAAAAGCGGAGTGGTCTTTAATGTTGTAGGACAAGTGATGGGGCTACTTTCAGATTACCAGCTGATGCTCACAACTTGGTTATCTCTGCATACGAACACTGGGAAGAAGTTGATTCTATTGATGATGAAAATTCTCTTGCAGGGGGCTCTTCTCAGCCAGTCAGTTTCCTTTACACCCCGAGCTCACCAATGGAGGACCATTCTTCTTATGGTAGCAAGTACTTGGCCTCTCCAAAATTTAGTGGCTTTGATTTTACACCATCAAATGCCTATACTTCTGACATAA 1386 43.0 MFAYLYIFCCLSRRMLVFLVHCNLRQFHRIVLCLYVFLPPMSSQKRNPDDGDAPADGDNPDDKRRKFSFWSVVREARSLQLTQQLLEPLIRKVVREEVELALRKYITNVQRNDENDDKEIYSSGPRCFRLKFVTDMSLPVFTGARIEGRDGSNLRVALIDTLSGKIVDTGPQSSAKVEIVVLEGDFEGGGDNYTIEEFKNNIVREREGKKPLLTGDTFVNLKDGIGLVGEISFTDNSSWTRSRRFRLGARIIDENDGTRVLEAKTASFVVRDHRGELYKKHHPPYLQDEVWRLQKISKDGAYHKRLSQEKIETVQDFLTLLYVQPSRLRNVLGPGMSTKMWEATIEHAQTCVLDKKLYVYKPRDLEQKSGVVFNVVGQVMGLLSDYQLMLTTWLSLHTNTGKKLILLMMKILLQGALLSQSVSFTPRAHQWRTILLMVASTWPLQNLVALILHHQMPILLT 461
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 72140758 72150718 + Tan0017169.2 Tan09g2205 764548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g2205 461 Pfam Calmodulin binding protein-like N-terminal domain 128 273 IPR046831 -
Tan09g2205 461 Pfam Calmodulin binding protein central domain 286 351 IPR046830 -
Tan09g2205 461 Pfam Calmodulin binding protein C-terminal domain 356 389 IPR046829 -
Tan09g2205 461 PANTHER OS02G0177800 PROTEIN 52 387 IPR012416 GO:0003700(PANTHER)|GO:0005516(InterPro)|GO:0005634(PANTHER)|GO:0043565(PANTHER)|GO:0080142(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g2204 Tan-Chr9:72140758 Tan09g2205 Tan-Chr9:72140758 6.90E-224 tandem
Tan09g2205 Tan-Chr9:72140758 Tan09g2206 Tan-Chr9:72140758 8.40E-161 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g2205 - - - 0.0