Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g2206 ATGAAATATCATCCGTTTATGTTAAGGAATGATGAAAATGATGATAAAGAAATCTATTCTTCCGGGCCAAGATGCTTTCGATTGAAGTTCGTAACTGATATGTCTCTCCCGGTATTTACTGGAGCTCGCATTGAAGGAAGAGATGGTTCCAACTTGAGGGTGGCTTTGATTGATACACTAAGTGGGAAAATTGTTGACACTGGGCCTCAGTCCTCAGCGAAAGTGGAAATTGTAGTGCTCGAGGGTGATTTTGAGGGTGGAGGTGATAATTACACTATAGAGGAGTTTAAGAATAACATTGTAAGAGAGAGGGAAGGAAAGAAACCACTTCTTACAGGAGATACATTTGTGAATCTCAAAGATGGAATTGGTTTGGTAGGCGAGATTTCTTTCACTGATAATTCAAGCTGGACTAGAAGCCGTCGGTTCAGGCTGGGTGCAAGAATTATAGATGAAAATGATGGAACGAGAGTACTAGAAGCAAAGACTGCATCATTTGTAGTCAGGGATCACCGTGGAGAATTGTACAAGAAGCACCACCCTCCATATCTGCAAGATGAAGTATGGAGATTGCAGAAAATTAGCAAAGATGGAGCCTATCACAAGCGCCTGAGCCAAGAAAAAATCGAGACGGTGCAAGATTTCTTAACTCTACTTTACGTACAACCTTCAAGGCTTCGTAATGTACTTGGCCCCGGTATGTCTACCAAAATGTGGGAAGCTACAATTGAGCATGCACAGACATGTGTGCTTGATAAGAAGCTTTACGTGTACAAACCTCGTGATTTGGAACAGAAAAGCGGAGTGGTCTTTAATGTTGTAGGACAAGTGATGGGGCTACTTTCAGATTACCAGTACGTTCCCATAGATAAGCTAGCTGAAACTGAAAAGGCTGATGCTCACAACTTGGTTATCTCTGCATACGAACACTGGGAAGAAGTTGATTCTATTGATGATGAAAATTCTCTTGCAGGGGGCTCTTCTCAGCCAGTCAGTTTCCTTTACACCCCGAGCTCACCAATGGAGGACCATTCTTCTTATGGTAGCAAGTACTTGGCCTCTCCAAAATTTAGTGGCTTTGATTTTACACCATCAAATGCCTATACTTCTGACATAATTTCATCCATGGGTTCTATTGGGAATGCAAGTGGCTTGGACGATCATGCTTTGCAAGGTTTTGATTCTATGGTTGTAAGATATGATCAGATTTCAAGTTCCCCAAACTTTGCCAGCTCTTCTCTGGTCTGCAATTCCGAGCCACTAAACTCATCTTTCTACGATGTGGATCATATGCAAGTTTTAGAGTCTGATTTCCAATCTAGCTCGTTTTTAGAATCACGAGCTGCTCTTCGAGGCGCTCAAATTAGATGGACTAAGGTATATGGTGTGCTACAATGGTATTTTTTGTTTATTCGGAGAAACAAACGCAGATTTGAGAGATACAAAGGTGGTCGTGGTAAGGAAAAATTGGACTATGGTTGA 1482 41.7 MKYHPFMLRNDENDDKEIYSSGPRCFRLKFVTDMSLPVFTGARIEGRDGSNLRVALIDTLSGKIVDTGPQSSAKVEIVVLEGDFEGGGDNYTIEEFKNNIVREREGKKPLLTGDTFVNLKDGIGLVGEISFTDNSSWTRSRRFRLGARIIDENDGTRVLEAKTASFVVRDHRGELYKKHHPPYLQDEVWRLQKISKDGAYHKRLSQEKIETVQDFLTLLYVQPSRLRNVLGPGMSTKMWEATIEHAQTCVLDKKLYVYKPRDLEQKSGVVFNVVGQVMGLLSDYQYVPIDKLAETEKADAHNLVISAYEHWEEVDSIDDENSLAGGSSQPVSFLYTPSSPMEDHSSYGSKYLASPKFSGFDFTPSNAYTSDIISSMGSIGNASGLDDHALQGFDSMVVRYDQISSSPNFASSSLVCNSEPLNSSFYDVDHMQVLESDFQSSSFLESRAALRGAQIRWTKVYGVLQWYFLFIRRNKRRFERYKGGRGKEKLDYG 493
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 72140758 72150718 + Tan0017169.3 Tan09g2206 764549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g2206 493 PANTHER OS02G0177800 PROTEIN 17 475 IPR012416 GO:0003700(PANTHER)|GO:0005516(InterPro)|GO:0005634(PANTHER)|GO:0043565(PANTHER)|GO:0080142(PANTHER)
Tan09g2206 493 Pfam Calmodulin binding protein-like N-terminal domain 26 171 IPR046831 -
Tan09g2206 493 Pfam Calmodulin binding protein C-terminal domain 254 316 IPR046829 -
Tan09g2206 493 Pfam Calmodulin binding protein central domain 184 249 IPR046830 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g0139 Tan-Chr9:7306709 Tan09g2206 Tan-Chr9:72140758 1.10E-49 dispersed
Tan09g2204 Tan-Chr9:72140758 Tan09g2206 Tan-Chr9:72140758 5.60E-282 dispersed
Tan09g2205 Tan-Chr9:72140758 Tan09g2206 Tan-Chr9:72140758 8.40E-161 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g2206 - - - 0.0