Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g2232 ATGCATAACATCGCTTATTCTCGATTGGGCGACCTTCACAAATCCCTTTCTCTCTACCGGAAAGTGCCTTGGTGGGATCATATTCTCGAACCAGATTCCGATTTCGTCATCCGATGGAACCGCATCTTCCTCGTCACTTGCTTGATCGCGCTCTTCGTCGATCCTCTTTACTTCTATCTCCCTGTCATCGGCGGCCCTGCTTGTATGCGATTCCACTTCGGACTTGGCATCGTCATCACTTGCTTCCGCACCGTCGTCGATTTGTTCTCCATGTTTCATATGCTTATGAAATTTCGCACCGCTTTCGTTGCGCCTAATTCTAGGGTTTTTGGACGCGGGGAGCTTGTTATGGACCCTAGGGCTATTGCTATGCGCTACCTCAAGAAGGATTTCGTCATCGATCTAGCCGCCACGCTTCCTCTGCCTCAGATTGTGATTTGGTTCGTGATTCCAGCATTAAAAAATCCAAGTGCGGCTCATACCAACCACACTCTTGCTTTGATTGTGCTTATTCAATATGCCCCTCGACTGTTTGTTATATTTCCTCTGAACCGACGGATCAATAAGACCACCGGAGCAATAGCCAAAACTGCGTGGGCTGGTGCAGCTTATAATCTCCTTCTCTATTTGCTTGCTAGCCATGTTATAGGAGCTGCATGGTATGTGGCATCCATTCAGCGCCAGGATGAGTGTTGGAAGATGGAATGTAGAAAGGAGATGAATACCACACATTCTCCTTCTTGCATACCCTTTTTTCTGGATTGTGATAGTTTGTATCTGCCAGAACGAAAGGCTTGGCTGAGAGTTACTCGTGTTCTTACCAACTGTGATGCGCTAAATGATGACAAGAACTTTGAGTTTGGGATGTTTGCTGATGCGTTTACTGATGAAGTTGCTTCATCAAACTTTTTCGAGAAGTACTTCTACTGCCTTTGGTGGGGTTTGAAGAGTTTGAGTGCATATGGACAAAATTTAACGACGAGCACTTATGTTGGTGAAATTTTATTTAGCATTATGATTTGCTCATTGGGGTTGGTTCTCTTCTCGCACCTCATAGGTCAAGTGCAGAGCTATCTGCAATCCACAACTGCTAGACTTGAACAGTGGAGAGTAAAACGAAGAGATACAGAGGAATGGATGAGGCATCGACAATTACCCATTCATTTGCAAGAGCGGGTTCGCCGATTCGTTCAATATAAATGGATAGCAACTCGAGGTGTAGACGAAGAGTCGATCTTGCGCTCTTTACCTTTGGATCTTCGACGTCAAATTCAAAGACATCTTTCTCTTGCGCTTGTTCGTCGTGTTCCCTTTTTTGCTCAAATGGATGGTCAGCTACTCGACGCCATATGCCAGCGTCTCGTCTCGTCCTTGAATACTAAAGACACATTCATAACCAGGGAAGGAGATCCAGTAAATGAGATGCTGTTCATCATCAGAGGCCAACTAGAAAGCTCCACCACCAATGGAGGGAGGTCTGGATTCTTCAACTCCATCACCCTCCGACCGGGCGACTTCTGTGGCGAAGAGCTACTAACATGGGCATTAGTCCCATCTCCCAGCCTTAGCTTTCCGTCCTCGACTCGAACGGTGAAGTCGATCACTGAAGTTGAGGCATTCGCTCTCCGAGCCGAGGATCTCAAGTTTGTAGCTAGCCAGTTCAAGCGCCTACACAGCAAGAAACTGCAGCATGCTTTCAGATACTATTCCCATCAATGGAGGACATGGGGATCTTGCTTCATACAAGCTGCTTGGAGAAGATATGTGAAAAGAAAGCTAGCAATGGAGTTAGCAAGACAAGAAGAGCTATATTACACAACCATCTTGGACCAAGACTCCAGCCATGACAGTGAAATGGAAGGTGAAGAAGAAAATGGTGAAACCAGTGGCTCCAAAAATGAGAAGAGTGTAAACAAACCCCAACGTCTTGGAATAACAATGTTGGCTTCAAAATTTGCAGCAAATACAAGAAGAGGGGTTAACCAGAAGTTGTCTGGGCTTGTTGTTCCTGATGCCACCAGCTTGAAAATGCCCAAGCTGTTTAAGCCTGATGAACCAGATTTCTCTGCTTTCCAAGAATGA 2082 45.82 MHNIAYSRLGDLHKSLSLYRKVPWWDHILEPDSDFVIRWNRIFLVTCLIALFVDPLYFYLPVIGGPACMRFHFGLGIVITCFRTVVDLFSMFHMLMKFRTAFVAPNSRVFGRGELVMDPRAIAMRYLKKDFVIDLAATLPLPQIVIWFVIPALKNPSAAHTNHTLALIVLIQYAPRLFVIFPLNRRINKTTGAIAKTAWAGAAYNLLLYLLASHVIGAAWYVASIQRQDECWKMECRKEMNTTHSPSCIPFFLDCDSLYLPERKAWLRVTRVLTNCDALNDDKNFEFGMFADAFTDEVASSNFFEKYFYCLWWGLKSLSAYGQNLTTSTYVGEILFSIMICSLGLVLFSHLIGQVQSYLQSTTARLEQWRVKRRDTEEWMRHRQLPIHLQERVRRFVQYKWIATRGVDEESILRSLPLDLRRQIQRHLSLALVRRVPFFAQMDGQLLDAICQRLVSSLNTKDTFITREGDPVNEMLFIIRGQLESSTTNGGRSGFFNSITLRPGDFCGEELLTWALVPSPSLSFPSSTRTVKSITEVEAFALRAEDLKFVASQFKRLHSKKLQHAFRYYSHQWRTWGSCFIQAAWRRYVKRKLAMELARQEELYYTTILDQDSSHDSEMEGEEENGETSGSKNEKSVNKPQRLGITMLASKFAANTRRGVNQKLSGLVVPDATSLKMPKLFKPDEPDFSAFQE 693
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 72293772 72297343 + Tan0013839.1 Tan09g2232 764575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g2232 693 ProSiteProfiles cAMP/cGMP binding motif profile. 438 568 IPR000595 -
Tan09g2232 693 Gene3D Helix hairpin bin 364 428 - -
Tan09g2232 693 MobiDBLite consensus disorder prediction 612 641 - -
Tan09g2232 693 Pfam Ion transport protein 39 365 IPR005821 GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan09g2232 693 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 24 663 - -
Tan09g2232 693 SUPERFAMILY Voltage-gated potassium channels 31 360 - -
Tan09g2232 693 CDD CAP_ED 438 569 IPR000595 -
Tan09g2232 693 Gene3D Jelly Rolls 436 556 IPR014710 -
Tan09g2232 693 SUPERFAMILY cAMP-binding domain-like 367 563 IPR018490 -
Tan09g2232 693 FunFam Cyclic nucleotide-gated ion channel 1 436 554 - -
Tan09g2232 693 Pfam Cyclic nucleotide-binding domain 461 549 IPR000595 -
Tan09g2232 693 Gene3D - 42 362 - -
Tan09g2232 693 SMART cnmp_10 438 569 IPR000595 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g1637 Tan-Chr9:68010666 Tan09g2232 Tan-Chr9:72293772 4.80E-235 dispersed
Tan09g2232 Tan-Chr9:72293772 Tan10g0128 Tan-Chr10:1398240 1.60E-150 dispersed
Tan07g1336 Tan-Chr7:62795370 Tan09g2232 Tan-Chr9:72293772 1.50E-270 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g2232 K05391 - csv:101209760 1194.49