Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g2233 ATGGCTGCTCGTAGAGGAATCTGTTCTTTACTCTCTCGTTCTCTCTTATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGGTTATGGGTTTAGTTCTTTTCTTCAATCTCATGGAAGAGTTTCAAGGTTCCATGGAAGAGGGAACAGATTCAGCACATCTGCTTTGGCACAGGAGGAACTTGTTACTCCTCCTGTTCAGATAAGTTACACTCAGAATCTGATTAATGGGCAGTTTGTAGATGCTGCATCAGGGAAAACATTTCCAACCTACGATCCTCGCACCGGGGAAGTGATTGCTCATGTTGCCGAGGGTGAGGCCGAGGATATCAACCGGGCGGTATCAGCAGCTCGCAAGGCTTTCGACGAGGGGCCATGGCCGAAAATGACTGCTTATGAGCGATCGAGGATATTACTGCGGTTTGCGGATTTGGTTGAGAAACATAGCACTGAACTTGCAGCATTGGAGTCATGGAACAATGGGAAACCTTATGAACAATCAGCTAGAACCGAACTACCATTACTCGTGCGCTTGTTTCACTATTACGCCGGCTGGGCAGACAAAATCCATGGCTTAACAGTTCCAGCTGATGGGAACCATCATGTGCAAGTATTACATGAACCAATTGGAGTTGCAGGACAGATAATTCCATGGAACTTTCCTCTGGTGATGTTTGCTTGGAAAGTTGGTCCTGCTCTTGCTTGTGGCAACACCATTGTCCTAAAAACTGCAGAGCAAACACCTCTGACTGCTCTTTATGTCGCAAAGTTATTCCAGGAGGCTGGTCTGCCTCCAGGTGTTCTGAATGTCGTTTCGGGCTATGGTCCAACGGCCGGTGCTGCCCTTGCTAGCCATATGGATGTGGACAAGCTAGCTTTCACAGGATCAACAGGCACAGGAAAAGTTGTGCTTGAATTGGCAGCCAAAAGCAATTTGAAGCCGGTAACACTAGAACTTGGAGGGAAATCGCCTTTCATCGTTTGCGAGGATGCAGACGTCGATAAGGCTGTGGAACTTGCTCATTTTGCTCTTTTCTTCAATCAGGGGCAATGTTGCTGTGCTGGATCTCGTACCTTCGTGCATGAGCGCGTATACGACGAGTTTGTCGAGAAATCGAAGGCGCGTGCACAAAGACGTGTTGTTGGTGACCCTTTTAAGAAGGGTGTTGAACAGGGTCCTCAGATCGACTCGGAGCAATTCAAAAAAGTCCTAAGGTACATAAAATCTGGCATTGAAAGTGATGCTACTTTGGAATGTGGAGGTGATAGACTTGGGTCCAGGGGATACTTTATCCAGCCAACAGTTTTCTCAAATGTTAAGGACGATATGTTGATAGCAAAGGATGAAATCTTCGGTCCAGTACAATCCATCTTGAAGTTCAAGGACATTGATGAAGTAATTCAAAGGGCAAACGCGACTCGTTACGGTCTAGCTGCAGGAGTTTTCACTACGAACATCGACACAGCCAACACGCTAACACGAGGATTGAGGACAGGGACCGTGTGGGTCAATTGCTTCGACGTATTCGACGCTGCAATACCGTTTGGCGGGTATAAGATGAGTGGAATGGGGAGGGAGAAGGGAATTTACAGCCTCCAAAACTACTTGCAGGTGAAGGCTGTGGTTACTCCTCTTAAGAATCCAGCATGGTTGTAA 1653 46.88 MAARRGICSLLSRSLLSSSSSSSSSSGYGFSSFLQSHGRVSRFHGRGNRFSTSALAQEELVTPPVQISYTQNLINGQFVDAASGKTFPTYDPRTGEVIAHVAEGEAEDINRAVSAARKAFDEGPWPKMTAYERSRILLRFADLVEKHSTELAALESWNNGKPYEQSARTELPLLVRLFHYYAGWADKIHGLTVPADGNHHVQVLHEPIGVAGQIIPWNFPLVMFAWKVGPALACGNTIVLKTAEQTPLTALYVAKLFQEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLAFTGSTGTGKVVLELAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKSKARAQRRVVGDPFKKGVEQGPQIDSEQFKKVLRYIKSGIESDATLECGGDRLGSRGYFIQPTVFSNVKDDMLIAKDEIFGPVQSILKFKDIDEVIQRANATRYGLAAGVFTTNIDTANTLTRGLRTGTVWVNCFDVFDAAIPFGGYKMSGMGREKGIYSLQNYLQVKAVVTPLKNPAWL 550
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 72300960 72304519 + Tan0011084.1 Tan09g2233 764576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g2233 550 Pfam Aldehyde dehydrogenase family 78 540 IPR015590 GO:0016491(InterPro)
Tan09g2233 550 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 84 540 IPR016162 GO:0016491(InterPro)
Tan09g2233 550 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 322 511 IPR016163 GO:0016620(InterPro)
Tan09g2233 550 FunFam Mitochondrial aldehyde dehydrogenase 2 322 511 - -
Tan09g2233 550 SUPERFAMILY ALDH-like 66 544 IPR016161 GO:0016491(InterPro)
Tan09g2233 550 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 74 344 - -
Tan09g2233 550 FunFam Aldehyde dehydrogenase, putative 512 538 - -
Tan09g2233 550 CDD ALDH_F2BC 67 542 - -
Tan09g2233 550 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 316 323 IPR029510 GO:0016491(InterPro)
Tan09g2233 550 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 344 355 IPR016160 GO:0016491(InterPro)
Tan09g2233 550 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 62 542 - GO:0004029(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g2877 Tan-Chr2:97067790 Tan09g2233 Tan-Chr9:72300960 2.00E-251 dispersed
Tan02g2878 Tan-Chr2:97067790 Tan09g2233 Tan-Chr9:72300960 4.80E-250 dispersed
Tan09g1303 Tan-Chr9:65254879 Tan09g2233 Tan-Chr9:72300960 7.70E-161 dispersed
Tan09g2198 Tan-Chr9:71992034 Tan09g2233 Tan-Chr9:72300960 3.60E-96 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g2233 K00128 - csv:101209430 993.03