Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g2234 ATGAAGGAGAACAATGATGGGTTTGTGCGGGCGGATCAGATTGATCTGAAGAGCTTGGATGAGCAGCTTGAGAGGCATCTTAACAGAGCCTTGACGATGGAGAAGAACAAGAAGAAAGATGAAGACGGTAATAGCTTTCTCACTTCCGCTGCCATCGCTCGCAGTAGGTCTACTAAAGTCGCTGCTAAGGAGCGGCAGGAGTGGGAGATCGATCCCTCCAAACTGATAATCAAGAGCGTCATTGCTCGTGGTACTTTCGGCACCGTCCACCGCGGCGTTTACGACGGACTAGATGTCGCCGTCAAGTTGCTGGATTGGGGAGAAGAAGGTCACAGGACAGAAGCTGAAATTGCTTCACTAAGGGCAGCTTTTAAACAGGAAGTTGCTGTTTGGCATAAACTAGAGCATCCCAATGTTACTAAGTTTATAGGAGCAACAATGGGCTCAGCGGAGTTACAGATTCAAACTGAAAATGGTCTAATTGGCATGCCAAGTAACATATGTTGTGTTGTGGTGGAATATCTCGCCGGAGGTGCCCTTAAATCTTATCTCATAAAGAACAGGAGAAGGAAGCTAGCTTTCAAGGTGGTTGTCCAGTTGGCACTTGATCTTGCTAGAGGGTTGAGTTACCTTCATTCTCAGAAGATTGTTCACAGAGATGTAAAGACAGAAAACATGCTGTTGGACAAAACGCGTACAGTCAAAATTGCTGATTTTGGCGTTGCTAGAGTTGAGGCCTCAAATCCCAATGACATGACCGGGGAGACTGGGACACTCGGTTACATGGCTCCTGAGGTTCTCAATGGCAACCCATATAACAGGAAGTGTGATGTGTACAGCTTCGGCATCTGTCTGTGGGAAATTTATTGCTGTGACATGCCATATCCTGACCTTAGTTTCTCTGAAGTCACTTCTGCTGTGGTTCGTCAGAATCTGAGGCCAGAGATACCGAGATGTTGCCCGAGCTCTTTGGCAAATGTGATGAAGCGTTGCTGGGATGCGACCCCGGACAAGAGGCCCGAGATGGACGAAGTAGTTTCCATGTTGGAGGCCATTGACACATCCAAGGGTGGAGGTATGATCCCTGTTGATCAAGCTCAGGGTTGTCTATGCTTTCGAAAATACCGAGGGCCTTAA 1137 47.67 MKENNDGFVRADQIDLKSLDEQLERHLNRALTMEKNKKKDEDGNSFLTSAAIARSRSTKVAAKERQEWEIDPSKLIIKSVIARGTFGTVHRGVYDGLDVAVKLLDWGEEGHRTEAEIASLRAAFKQEVAVWHKLEHPNVTKFIGATMGSAELQIQTENGLIGMPSNICCVVVEYLAGGALKSYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKTRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDATPDKRPEMDEVVSMLEAIDTSKGGGMIPVDQAQGCLCFRKYRGP 378
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 72305500 72309375 - Tan0018669.1 Tan09g2234 764577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g2234 378 CDD STKc_MAP3K-like 81 349 - -
Tan09g2234 378 SMART serkin_6 75 352 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g2234 378 ProSiteProfiles Protein kinase domain profile. 75 352 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g2234 378 PRINTS Tyrosine kinase catalytic domain signature 320 342 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan09g2234 378 PRINTS Tyrosine kinase catalytic domain signature 172 185 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan09g2234 378 PRINTS Tyrosine kinase catalytic domain signature 276 298 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan09g2234 378 PRINTS Tyrosine kinase catalytic domain signature 210 228 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan09g2234 378 SUPERFAMILY Protein kinase-like (PK-like) 59 349 IPR011009 -
Tan09g2234 378 ProSitePatterns Serine/Threonine protein kinases active-site signature. 216 228 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan09g2234 378 FunFam Serine/threonine-protein kinase HT1 175 360 - -
Tan09g2234 378 FunFam Kinase suppressor of Ras 1 64 159 - -
Tan09g2234 378 Coils Coil 16 36 - -
Tan09g2234 378 Gene3D Transferase(Phosphotransferase) domain 1 176 365 - -
Tan09g2234 378 Pfam Protein tyrosine and serine/threonine kinase 77 349 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan09g2234 378 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 54 350 IPR051681 GO:0004674(PANTHER)|GO:0005886(PANTHER)
Tan09g2234 378 Gene3D Phosphorylase Kinase; domain 1 63 158 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g2234 Tan-Chr9:72305500 Tan10g0802 Tan-Chr10:6778818 8.80E-148 dispersed
Tan07g1352 Tan-Chr7:63201828 Tan09g2234 Tan-Chr9:72305500 5.40E-190 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68099 PF07714 PK_Tyr_Ser-Thr 3.70E-63 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g2234 - - - 0.0