Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g2281 ATGCCTGTAAATTCATGGACCCTCCCTTCATCTATCCCAATCCTCTGTTTTTCAATCTTATTTCTCTTCCCTTTTTCACCTTCTTCCGCCATTAATGAACAGGGTCAAGCTCTACTCTCTTGGAAGCTAAGTTTCAATGGATCAAACGGGGTGCTAAGTAATTGGGACCCCAGCAATGAAACTCCATGTGGGTGGTTTGGAATCACTTGCAACAAAAATAGACAAGTAGTGGAAGTAGTTTTGAGGAACTTGAACTTACCTGGTAAGCTTCCATGGAATTTCTCTTCGTTGTTGTCTTTGAACAAGCTCGTCTTGTCGGGAGTGAATCTCACTGGCTCCATTCCTAAAGAGATCGGTGTTCTCACCCAGTTGCGGACCTTGGAACTCAGTGACAATGGCTTGACTGGAGAGATTCCAAGTGAAATATGCTCCTTGCGAAATCTCGAACAGCTTTGCCTCAATTCAAATTTTCTTGAAGGGTCAATTCCTGCTGGGATCGGGAATCTCACGAACTTGAAGGAGTTGCTTCTCTATGACAATCAGTTAAGCGGGGGAATTCCCATTAGTATAGGAAATTTGAAGCAGATTGAAGTGATTAGAGCTGGAGGAAACAAGAACTTACTTGGTTCTGTGCCGGAAGAAATTGGTAACTGCAGCAGTTTGGTGGTTCTTGGGCTAGCTGAAACAAGCATCTCCGGCTTTCTTCCGGCTAGTCTTGGACTTCTCAAGAAGCTTCAGACATTGGCAATTTATACAGCTCTTATCTCCGGCCAGATACCTCATGAACTTGGCGACTGCACTGAGCTTCAAAACCTCTATCTCTACGAGAACTCGCTCTCTGGTTCCATCCCAAGCTCACTAGGAAGGTTACAGAATCTCCAGAGTCTCCTTCTATGGCAGAACGAATTGGTCGGCGTTATACCGCCGGAGATAGGTGGATGTGACCAGTTATTAGTCATCGACATTTCTATTAATTCCCTGACCGGAAGAATTCCTTCAACATTTGAGAACTTAACAATGCTTCAAGAATTGCAACTGAGTTCAAATCAATTATCCGGTGAGATTCCGAAGGAGATCGCGAACTGTCCAAGAATCACTCACATCGAGCTTGATAATAATCAGCTCACTGGTACGATTCCCTCTGAATTGGGAGATCTCACCAATCTGACATTGCTTTTCTTGTGGCAAAACAAGCTCGAGGGAAGTATTCCACCCACCATTTCCAATTGTCGAAATCTCGAGGCCGTGGATTTATCACTGAACGCCTTAATTGGTTCAATTCCGACGGGATTTTTTCAGTTGAAGAAGCTTTCCAAGCTTCTGCTCCTCTCGAACAATCTCTCCGGCGGGATTCCACCGGCAATAGGTAACTGTTCGTCTCTATTTCGGTTCCGAGCGAGTAACAACAAGCTCACAGGGGAAATTCCGCCGGAGATTGGGAATTTGAAGAACTTGATTTTCCTGGACGTCGGAAACAATCGCCTTACTGGAGCGTTGCCTCCGGCGATTTCTGGATGCCGAAATTTGACATTCATTGATTTGCATTCCAATTCTCTTACGAAATTTCTTCCAGAAGAATTCAACCAGCTTTCTTCGCTCCAGTACGTTGATCTCTCGAATAACCTAATCGAAGGGACGCCGATTCCAAGTTTTGGATCTTTCAACTCGCTCACGAAACTCGTTCTCTCAAACAACCGCTTCTCGGGGCCTATACCGATTGAAATCGGTTCCTGCTTGAAGCTACAGTTACTGGATTTAAGTTGCAATCAACTCTCGGGGAACATTCCACCGAGCTTAGGCAAGATTCCTTCACTCGAAATTGGTTTGAATCTGAGTTTAAACCAACTAACCGGCCAGATTCCGCCGGAGTTTGCTAATTTAGACAAGCTCGGGTCCTTAGATCTCTCTCACAACCAACTCTCGGGCGACCTCCACATTCTCGCAGAACTGCAAAATCTCGTAGTCCTCAATGTATCACACAACAATTTCTCAGGACGCGTACCAGAGACGCCATTCTTCGCGCAGCTCCCTTTAAGCGTCCTCTCCGGGAACCCGGACTTGTGCTTCGCCGGCGAAAAATGCTACGCCGATGACCATAGCGGCGGCGCTCGCCACACGCTAGCGGCTCGAGTGGCTATGATTGTATTACTGTGCACGGCGTGCGCACTGCTACTAGCGGCAGTTTATATCATTCTCAAAGACAGACATTCATGTCGGCGATGCTTCAATGGGTCCCGCGGCGAGGATCCTGACGCCGCCTTCGACAGCGACCTGGAGCTTGGCTCAGGCTGGGAAGTGACACTATACCAGAAGCTCGATCTCTCAATCTCCGACGTAATCAAATGCTTAACGCCGGCCAATGTCATCGGCCGCGGCAAGACCGGCGTGGTGTACAGAGCCTGCATTTCATCAGGTCTAATAATCGCCGTGAAGCGATTCCGATCATCGGAAAAGTTCTCAGCGGCGGCGTTTTCGTCCGAAATCGCAACATTGGCGAGGATCCGACACCGGAACATCGTCCGATTGCTAGGGTGGGGGGCGAATCGGAGGACGAAATTGTTGTTCTACGACTACTTGCCGAATGGGAATTTGGGCGCGTTGCTACACGAGGGGAATGGGCGCGTGGGATTGGACTGGGAGAGTAGATTCAAGATAGCGTTGGGAGTGGCGGAGGGATTGGCTTATTTGCACCACGACTGCGTGCCGGCGATATTGCACCGGGACGTAAAGGCTCACAATATTCTGTTGGGGGATCGCTACCAGGCGTGTTTGGCGGACTTTGGGCTCGCACGGTTGGTTGAAGATGGTCCCAGCGGTTCTTCTTCCGCGAACCCTCAGTTCGCTGGGTCTTACGGCTATTTTGCACCTGAATATGGCTGCATGTTAAGGATCACAGAAAAGAGCGACGTGTACAGCTACGGCGTCGTTTTGCTGGAGATAATAACAGGCAAAAAGCCTGCAGACTCCTCCTTCGCAGAGGGCCAGCACGTGATTCAATGGGTGAGAGAGCATTTAAAGATGAAGAAGGATCCGGTTTCAATATTGGATCCGAAACTTCAGGGTCAACCCGATCCACAGATCCAGGAGATTCTGCAGGCATTAGGAATCTCCCTGCTCTGCACCAGCGACCGCGCCAACGACCGGCCGACGATGAAAGACGTGGCGGCTCTTTTACGGGAGATCCGACAGGACCAACCGCCGACAGCGGCGGAGGCCGCCGACAAGCCGCCACGAAACATTAGTAACGCAACAATCTTGGACACAGCGACGTCGTTTTCATCTTCCTCTTCGACGGCTCCTGCGAGCCATTTGCTTTTTACGCTGCCCCTTCAGGAGTCGTCACGTTGCTCTTATGCTTCGCTGTCCTCGTCGGGCGCGTATTTTCCACGCAATCAATGA 3399 49.31 MPVNSWTLPSSIPILCFSILFLFPFSPSSAINEQGQALLSWKLSFNGSNGVLSNWDPSNETPCGWFGITCNKNRQVVEVVLRNLNLPGKLPWNFSSLLSLNKLVLSGVNLTGSIPKEIGVLTQLRTLELSDNGLTGEIPSEICSLRNLEQLCLNSNFLEGSIPAGIGNLTNLKELLLYDNQLSGGIPISIGNLKQIEVIRAGGNKNLLGSVPEEIGNCSSLVVLGLAETSISGFLPASLGLLKKLQTLAIYTALISGQIPHELGDCTELQNLYLYENSLSGSIPSSLGRLQNLQSLLLWQNELVGVIPPEIGGCDQLLVIDISINSLTGRIPSTFENLTMLQELQLSSNQLSGEIPKEIANCPRITHIELDNNQLTGTIPSELGDLTNLTLLFLWQNKLEGSIPPTISNCRNLEAVDLSLNALIGSIPTGFFQLKKLSKLLLLSNNLSGGIPPAIGNCSSLFRFRASNNKLTGEIPPEIGNLKNLIFLDVGNNRLTGALPPAISGCRNLTFIDLHSNSLTKFLPEEFNQLSSLQYVDLSNNLIEGTPIPSFGSFNSLTKLVLSNNRFSGPIPIEIGSCLKLQLLDLSCNQLSGNIPPSLGKIPSLEIGLNLSLNQLTGQIPPEFANLDKLGSLDLSHNQLSGDLHILAELQNLVVLNVSHNNFSGRVPETPFFAQLPLSVLSGNPDLCFAGEKCYADDHSGGARHTLAARVAMIVLLCTACALLLAAVYIILKDRHSCRRCFNGSRGEDPDAAFDSDLELGSGWEVTLYQKLDLSISDVIKCLTPANVIGRGKTGVVYRACISSGLIIAVKRFRSSEKFSAAAFSSEIATLARIRHRNIVRLLGWGANRRTKLLFYDYLPNGNLGALLHEGNGRVGLDWESRFKIALGVAEGLAYLHHDCVPAILHRDVKAHNILLGDRYQACLADFGLARLVEDGPSGSSSANPQFAGSYGYFAPEYGCMLRITEKSDVYSYGVVLLEIITGKKPADSSFAEGQHVIQWVREHLKMKKDPVSILDPKLQGQPDPQIQEILQALGISLLCTSDRANDRPTMKDVAALLREIRQDQPPTAAEAADKPPRNISNATILDTATSFSSSSSTAPASHLLFTLPLQESSRCSYASLSSSGAYFPRNQ 1132
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 72768891 72773592 - Tan0001202.1 Tan09g2281 764624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g2281 1132 SMART LRR_sd22_2 627 652 - -
Tan09g2281 1132 SMART LRR_sd22_2 266 295 - -
Tan09g2281 1132 SMART LRR_sd22_2 121 150 - -
Tan09g2281 1132 SMART LRR_sd22_2 169 195 - -
Tan09g2281 1132 SMART LRR_sd22_2 482 508 - -
Tan09g2281 1132 SMART LRR_sd22_2 386 415 - -
Tan09g2281 1132 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 859 1075 - -
Tan09g2281 1132 Gene3D Ribonuclease Inhibitor 449 546 IPR032675 -
Tan09g2281 1132 Gene3D Ribonuclease Inhibitor 30 203 IPR032675 -
Tan09g2281 1132 FunFam Nuclear pore complex protein NUP107 31 188 - -
Tan09g2281 1132 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 429 523 - -
Tan09g2281 1132 Pfam Leucine rich repeat 507 567 IPR001611 GO:0005515(InterPro)
Tan09g2281 1132 Pfam Leucine rich repeat 317 375 IPR001611 GO:0005515(InterPro)
Tan09g2281 1132 Pfam Leucine Rich Repeat 171 193 IPR001611 GO:0005515(InterPro)
Tan09g2281 1132 Pfam Leucine Rich Repeat 462 482 IPR001611 GO:0005515(InterPro)
Tan09g2281 1132 Pfam Leucine Rich Repeat 484 506 IPR001611 GO:0005515(InterPro)
Tan09g2281 1132 Pfam Leucine Rich Repeat 609 627 IPR001611 GO:0005515(InterPro)
Tan09g2281 1132 Pfam Leucine Rich Repeat 269 290 IPR001611 GO:0005515(InterPro)
Tan09g2281 1132 Pfam Leucine Rich Repeat 123 145 IPR001611 GO:0005515(InterPro)
Tan09g2281 1132 Pfam Leucine Rich Repeat 388 410 IPR001611 GO:0005515(InterPro)
Tan09g2281 1132 Pfam Leucine Rich Repeat 652 670 IPR001611 GO:0005515(InterPro)
Tan09g2281 1132 Pfam Leucine Rich Repeat 580 601 IPR001611 GO:0005515(InterPro)
Tan09g2281 1132 Pfam Leucine Rich Repeat 147 169 IPR001611 GO:0005515(InterPro)
Tan09g2281 1132 SUPERFAMILY Protein kinase-like (PK-like) 775 1058 IPR011009 -
Tan09g2281 1132 Gene3D Ribonuclease Inhibitor 547 606 IPR032675 -
Tan09g2281 1132 ProSiteProfiles Protein kinase domain profile. 783 1058 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g2281 1132 FunFam Putative LRR receptor-like serine/threonine-protein kinase 608 693 - -
Tan09g2281 1132 SMART LRR_typ_2 338 362 IPR003591 -
Tan09g2281 1132 SMART LRR_typ_2 386 410 IPR003591 -
Tan09g2281 1132 SMART LRR_typ_2 507 529 IPR003591 -
Tan09g2281 1132 SMART LRR_typ_2 434 458 IPR003591 -
Tan09g2281 1132 SMART LRR_typ_2 169 193 IPR003591 -
Tan09g2281 1132 SMART LRR_typ_2 121 145 IPR003591 -
Tan09g2281 1132 SMART LRR_typ_2 554 578 IPR003591 -
Tan09g2281 1132 SMART LRR_typ_2 530 553 IPR003591 -
Tan09g2281 1132 SMART LRR_typ_2 290 314 IPR003591 -
Tan09g2281 1132 SMART LRR_typ_2 650 683 IPR003591 -
Tan09g2281 1132 SMART LRR_typ_2 482 506 IPR003591 -
Tan09g2281 1132 SUPERFAMILY L domain-like 54 379 - -
Tan09g2281 1132 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 444 1059 IPR051716 -
Tan09g2281 1132 SMART serkin_6 783 1039 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g2281 1132 Gene3D Ribonuclease Inhibitor 607 694 IPR032675 -
Tan09g2281 1132 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 205 428 - -
Tan09g2281 1132 ProSitePatterns Serine/Threonine protein kinases active-site signature. 904 916 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan09g2281 1132 Pfam Protein kinase domain 787 1054 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g2281 1132 SUPERFAMILY RNI-like 271 644 - -
Tan09g2281 1132 Gene3D Transferase(Phosphotransferase) domain 1 859 1083 - -
Tan09g2281 1132 FunFam Leucine-rich repeat receptor protein kinase EMS1 524 607 - -
Tan09g2281 1132 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Tan09g2281 1132 Gene3D Phosphorylase Kinase; domain 1 767 858 - -
Tan09g2281 1132 ProSiteProfiles Leucine-rich repeat profile. 629 651 IPR001611 GO:0005515(InterPro)
Tan09g2281 1132 Gene3D Ribonuclease Inhibitor 204 448 IPR032675 -
Tan09g2281 1132 ProSitePatterns Protein kinases ATP-binding region signature. 789 811 IPR017441 GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g2327 Tan-Chr6:74635291 Tan09g2281 Tan-Chr9:72768891 6.80E-103 dispersed
Tan09g2281 Tan-Chr9:72768891 Tan10g0583 Tan-Chr10:4766759 6.60E-98 dispersed
Tan01g3231 Tan-Chr1:86571938 Tan09g2281 Tan-Chr9:72768891 1.70E-103 transposed
Tan05g1985 Tan-Chr5:69767599 Tan09g2281 Tan-Chr9:72768891 1.20E-21 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68100 PF00069 Pkinase 1.00E-39 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g2281 - - - 0.0