Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g2306 ATGGAAGCTGGGAGTAGATTCTACTCTGCTACGCATGAGTTCAGATTGGAAGCGAAATGGTTGATTGATCCCAAACATCTCTTCGTCGGACCTAGAATTGGAGAGGGAGCTCATGCCAAAGTTTACGAGGGCAAATACAAGAATCAGACAGTTGCTATCAAAATTGTTCATAAAGGGGAAACGGCTGATGAGGTTGCAAAGAAAGAAGCTCGGTTTGCTCGAGAGGTTGCAATGTTGTCTAAAGTACAGCATAAAAATCTTGTCAAGTTTATTGGTGCCTGCAAGGAGCCTGTAATGGTGATAGTAACAGAGCTTTTATTAGGAGGGACCTTACGAAAGTACCTGCTCAATATGCGCCCACGGTGCTTGGAGACACGTGTGGCAGTTGGTTTTGCGCTTGATATTGCTCGTGCTATGGAATGCCTGCACTCTCATGGCATCATACACCGTGATCTGAAACCTGAGAACCTACTCTTGACTGCAGATCATAAAACAGTTAAATTAGCTGATTTTGGTTTGGCAAGAGAAGAGTCATTGACGGAGATGATGACTGCGGAGACGGGAACCTACCGTTGGATGGCTCCAGAGTTGTACAGCACCGTGACACTAAGGCAAGGGGAGAAGAAACATTACAACCATAAAGTCGATGCCTATAGCTTTGCAATTGTGTTATGGGAACTGCTACACAACAAGTTGCCATTTGAAGGCATGTCAAATCTTCAGGCAGCATATGCAGCTGCTTTTAAGAATGTAAGGCCTAGCGCAGAGAATCTCCCCGAGGAGCTGGCTATCGTTCTAACATCGTGCTGGCAAGAGGATGCAAATGCTCGTCCAAACTTCACCCAAATTATCCAAATGCTACTCAATTACCTTTACACCATTGCACCACCTGAGCAAGTGATCCCTTCCCGAGTTTTCACTTCTGAGAACACAGTATTTCCTCCTGAGTCTCCCGGAACAAGCTCACTGATGGCAGTCCGTGACGATTCAGGGGACACTCCAAAAGCTAAAATGGAAAACAAGTCCAGGGGTTGTTTCTTCTGCTCCAATGACTGTTACTAA 1062 45.57 MEAGSRFYSATHEFRLEAKWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETADEVAKKEARFAREVAMLSKVQHKNLVKFIGACKEPVMVIVTELLLGGTLRKYLLNMRPRCLETRVAVGFALDIARAMECLHSHGIIHRDLKPENLLLTADHKTVKLADFGLAREESLTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNHKVDAYSFAIVLWELLHNKLPFEGMSNLQAAYAAAFKNVRPSAENLPEELAIVLTSCWQEDANARPNFTQIIQMLLNYLYTIAPPEQVIPSRVFTSENTVFPPESPGTSSLMAVRDDSGDTPKAKMENKSRGCFFCSNDCY 353
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 72970771 72974439 + Tan0010967.1 Tan09g2306 764649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g2306 353 FunFam Kinase suppressor of Ras 1 16 106 - -
Tan09g2306 353 Gene3D Transferase(Phosphotransferase) domain 1 108 301 - -
Tan09g2306 353 ProSitePatterns Protein kinases ATP-binding region signature. 33 54 IPR017441 GO:0005524(InterPro)
Tan09g2306 353 PRINTS Tyrosine kinase catalytic domain signature 215 237 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan09g2306 353 PRINTS Tyrosine kinase catalytic domain signature 103 116 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan09g2306 353 PRINTS Tyrosine kinase catalytic domain signature 141 159 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan09g2306 353 PRINTS Tyrosine kinase catalytic domain signature 258 280 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan09g2306 353 PANTHER SERINE-THREONINE PROTEIN KINASE 21 288 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Tan09g2306 353 Gene3D Phosphorylase Kinase; domain 1 15 106 - -
Tan09g2306 353 SUPERFAMILY Protein kinase-like (PK-like) 18 316 IPR011009 -
Tan09g2306 353 ProSitePatterns Serine/Threonine protein kinases active-site signature. 147 159 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan09g2306 353 Pfam Protein tyrosine and serine/threonine kinase 32 287 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan09g2306 353 CDD STKc_MAP3K-like 33 287 - -
Tan09g2306 353 ProSiteProfiles Protein kinase domain profile. 27 291 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g2306 353 FunFam serine/threonine-protein kinase HT1 108 308 - -
Tan09g2306 353 SMART serkin_6 27 291 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g2306 353 MobiDBLite consensus disorder prediction 314 335 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan08g0942 Tan-Chr8:13611319 Tan09g2306 Tan-Chr9:72970771 2.90E-40 dispersed
Tan08g2223 Tan-Chr8:73840664 Tan09g2306 Tan-Chr9:72970771 5.70E-115 dispersed
Tan08g2224 Tan-Chr8:73840664 Tan09g2306 Tan-Chr9:72970771 5.70E-115 dispersed
Tan09g2306 Tan-Chr9:72970771 Tan11g0659 Tan-Chr11:5787079 7.70E-114 dispersed
Tan03g1959 Tan-Chr3:74710200 Tan09g2306 Tan-Chr9:72970771 4.30E-86 transposed
Tan07g1408 Tan-Chr7:65124226 Tan09g2306 Tan-Chr9:72970771 1.70E-161 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68102 PF07714 PK_Tyr_Ser-Thr 5.80E-58 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g2306 - - - 0.0