Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan09g2306 | ATGGAAGCTGGGAGTAGATTCTACTCTGCTACGCATGAGTTCAGATTGGAAGCGAAATGGTTGATTGATCCCAAACATCTCTTCGTCGGACCTAGAATTGGAGAGGGAGCTCATGCCAAAGTTTACGAGGGCAAATACAAGAATCAGACAGTTGCTATCAAAATTGTTCATAAAGGGGAAACGGCTGATGAGGTTGCAAAGAAAGAAGCTCGGTTTGCTCGAGAGGTTGCAATGTTGTCTAAAGTACAGCATAAAAATCTTGTCAAGTTTATTGGTGCCTGCAAGGAGCCTGTAATGGTGATAGTAACAGAGCTTTTATTAGGAGGGACCTTACGAAAGTACCTGCTCAATATGCGCCCACGGTGCTTGGAGACACGTGTGGCAGTTGGTTTTGCGCTTGATATTGCTCGTGCTATGGAATGCCTGCACTCTCATGGCATCATACACCGTGATCTGAAACCTGAGAACCTACTCTTGACTGCAGATCATAAAACAGTTAAATTAGCTGATTTTGGTTTGGCAAGAGAAGAGTCATTGACGGAGATGATGACTGCGGAGACGGGAACCTACCGTTGGATGGCTCCAGAGTTGTACAGCACCGTGACACTAAGGCAAGGGGAGAAGAAACATTACAACCATAAAGTCGATGCCTATAGCTTTGCAATTGTGTTATGGGAACTGCTACACAACAAGTTGCCATTTGAAGGCATGTCAAATCTTCAGGCAGCATATGCAGCTGCTTTTAAGAATGTAAGGCCTAGCGCAGAGAATCTCCCCGAGGAGCTGGCTATCGTTCTAACATCGTGCTGGCAAGAGGATGCAAATGCTCGTCCAAACTTCACCCAAATTATCCAAATGCTACTCAATTACCTTTACACCATTGCACCACCTGAGCAAGTGATCCCTTCCCGAGTTTTCACTTCTGAGAACACAGTATTTCCTCCTGAGTCTCCCGGAACAAGCTCACTGATGGCAGTCCGTGACGATTCAGGGGACACTCCAAAAGCTAAAATGGAAAACAAGTCCAGGGGTTGTTTCTTCTGCTCCAATGACTGTTACTAA | 1062 | 45.57 | MEAGSRFYSATHEFRLEAKWLIDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETADEVAKKEARFAREVAMLSKVQHKNLVKFIGACKEPVMVIVTELLLGGTLRKYLLNMRPRCLETRVAVGFALDIARAMECLHSHGIIHRDLKPENLLLTADHKTVKLADFGLAREESLTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNHKVDAYSFAIVLWELLHNKLPFEGMSNLQAAYAAAFKNVRPSAENLPEELAIVLTSCWQEDANARPNFTQIIQMLLNYLYTIAPPEQVIPSRVFTSENTVFPPESPGTSSLMAVRDDSGDTPKAKMENKSRGCFFCSNDCY | 353 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 72970771 | 72974439 | + | Tan0010967.1 | Tan09g2306 | 764649 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan09g2306 | 353 | FunFam | Kinase suppressor of Ras 1 | 16 | 106 | - | - | |
Tan09g2306 | 353 | Gene3D | Transferase(Phosphotransferase) domain 1 | 108 | 301 | - | - | |
Tan09g2306 | 353 | ProSitePatterns | Protein kinases ATP-binding region signature. | 33 | 54 | IPR017441 | GO:0005524(InterPro) | |
Tan09g2306 | 353 | PRINTS | Tyrosine kinase catalytic domain signature | 215 | 237 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan09g2306 | 353 | PRINTS | Tyrosine kinase catalytic domain signature | 103 | 116 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan09g2306 | 353 | PRINTS | Tyrosine kinase catalytic domain signature | 141 | 159 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan09g2306 | 353 | PRINTS | Tyrosine kinase catalytic domain signature | 258 | 280 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan09g2306 | 353 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 21 | 288 | IPR050167 | GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER) | |
Tan09g2306 | 353 | Gene3D | Phosphorylase Kinase; domain 1 | 15 | 106 | - | - | |
Tan09g2306 | 353 | SUPERFAMILY | Protein kinase-like (PK-like) | 18 | 316 | IPR011009 | - | |
Tan09g2306 | 353 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 147 | 159 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan09g2306 | 353 | Pfam | Protein tyrosine and serine/threonine kinase | 32 | 287 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan09g2306 | 353 | CDD | STKc_MAP3K-like | 33 | 287 | - | - | |
Tan09g2306 | 353 | ProSiteProfiles | Protein kinase domain profile. | 27 | 291 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan09g2306 | 353 | FunFam | serine/threonine-protein kinase HT1 | 108 | 308 | - | - | |
Tan09g2306 | 353 | SMART | serkin_6 | 27 | 291 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan09g2306 | 353 | MobiDBLite | consensus disorder prediction | 314 | 335 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan08g0942 | Tan-Chr8:13611319 | Tan09g2306 | Tan-Chr9:72970771 | 2.90E-40 | dispersed | |
Tan08g2223 | Tan-Chr8:73840664 | Tan09g2306 | Tan-Chr9:72970771 | 5.70E-115 | dispersed | |
Tan08g2224 | Tan-Chr8:73840664 | Tan09g2306 | Tan-Chr9:72970771 | 5.70E-115 | dispersed | |
Tan09g2306 | Tan-Chr9:72970771 | Tan11g0659 | Tan-Chr11:5787079 | 7.70E-114 | dispersed | |
Tan03g1959 | Tan-Chr3:74710200 | Tan09g2306 | Tan-Chr9:72970771 | 4.30E-86 | transposed | |
Tan07g1408 | Tan-Chr7:65124226 | Tan09g2306 | Tan-Chr9:72970771 | 1.70E-161 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
68102 | PF07714 | PK_Tyr_Ser-Thr | 5.80E-58 | CL0016 | Tan | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan09g2306 | - | - | - | 0.0 |