Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g2325 ATGCTTTCACCTTCCTCCAAACTCCTTCCCTTCTTCGCCTTTCTCTCCCTCCTTCTCCATGTCCATGCCCGACTCAGCCTTGATCCTTCAGATCTCAGAGCTTTTTCTGTCATCAAGAATGACTTGGGCATTGACGGTCAACTCTCCTCCTCCTCCCCATGCGACCTCGCCGGTGTCTTCTGTGAGCGCCGGCTCTCCGACAACGGCACTTATGTTTTGAGAATCACCAGGCTCATTTTCAAGTCCAAAGGTCTTGCCGGTTCTCTTTCTCCGGCTATTGGGCGTCTCACGGAGTTGAAAGAGCTTACGATTTCCAACAATCACCTCGTTGACCAAGTACCAGCCCAGATGGTTGACTGCCGGAAACTGGAAATTCTCGATCTCCAAAACAATCAGTTTTCTGGCAAAGTTCCATCTGGGTTGTCCTCGTTGATTCGCCTTCGAGTCATCGATCTTTCGTCCAATAAGTTCTCAGGGAGTTTGGATTTCTTGAAGCATTTCCCCAACTTGGAAAGTCTCTCCATAGCCAACAATTACTTCACGGGGAAGATCCCAGCTTCAATTCGTTCTTTTCGCAATCTTCGAGTCTTCAACTTCTCTGGAAATCGCCTTCTCGAAAGCTCAGCTCCCATCGTGAAAGGCGTCGAGTTCTACTCGGCAATCGAAGTCCCCAAGCGTTATAGGTTAGCTGAGAATTCCACTGCCAAAGGCAAGCACAGTGCCGCCGCCACAGCACCAACTGCGAGTGCTCAAGCTCCATCTCCCGCAGCATCTCCTCATAAGCATCGGAAAAATAAAGCAAAGAAGGTAGCTGCTTGGATACTTGGATTCCTCGCTGGAGCAATTGCTGGATGTTTGTCAGGGTTTATCTTTTCTCTACTGTTTAAAATCATCATAGCAGCTATAAAAGGTGGAAGCAAGAATTCGGGGCCCTCAATCTTTGCTCCTAAGTTAATAAAACGAGAGGACTTGGCTTTTCTAGAGAAAGAAGATGCGCTTGCATCACTCGAGCTGATTGGAAAAGGTGGATGTGGAGAAGTTTACAAGGCCGAATTACCGGAAAAAAGCGGGAGAATGTTTGCAATAAAGAAGATAACTCAGCCGGCAAAGGAGGCGGCCGAGCTAGCTGACGAGGATAGCAGGTTTATGAACAAGAAAATGCGTCAGATCAAGTCAGAGATTAGAACTGTGGGTGAAATCCGGCATCGGAATCTTCTACCTCTTGTGGCTCATGTCCACCGTCCTGATTGCCACTACCTTGTGTACGAATTGATGAAGAATGGAAGCTTGCAAGATATGTTGAATCAGGTTTCAGCAGGAGTGAAAGAACTAGATTGGCTTACTCGGCATAATATTGCTCTCGGAGTGGCATCTGGGCTGGAGTATCTTCACTTGAACCATACCCCACGTATTATTCACAGGGATTTGAAACCTGCAAATGTTTTGCTTGATGACAATATGGAAGCTCGAATTGCAGATTTTGGCCTGGCAAAAGCAATGCCAGATGCTCAAACTCACATGACAGCTTCAAATGTTGCAGGTACCGTGGGATACATTGCACCAGAGTATCATCAGACCTTGAAGTTCACTGATAAGTGCGATATATACGGCTTTGGGGTTCTGCTAGGTGTCTTGGTGATTGGAAAACTTCCATCTGATGAGTTTTTCCAGGACACCGATGAGATGAGTTTGGTTAAGTGGATGAAGAATGTTATGACTTCGGATAATCCTAGGAGGGCCATTGATCCGAAGCTCCGGGGAAAAGGCTGGGAGGAGCAAATGCTCTTGGCCCTCAAAATTGCCTGCTTTTGCACCATGGATAATCCAAAAGAGAGGCCTAACAGCAAGGATGTCAGATGCATGCTGTCACAGATCAAGCACGACGTACCTGAGGCTGAAACTCCCTCTTCTCAGAACGTCTAA 1923 47.11 MLSPSSKLLPFFAFLSLLLHVHARLSLDPSDLRAFSVIKNDLGIDGQLSSSSPCDLAGVFCERRLSDNGTYVLRITRLIFKSKGLAGSLSPAIGRLTELKELTISNNHLVDQVPAQMVDCRKLEILDLQNNQFSGKVPSGLSSLIRLRVIDLSSNKFSGSLDFLKHFPNLESLSIANNYFTGKIPASIRSFRNLRVFNFSGNRLLESSAPIVKGVEFYSAIEVPKRYRLAENSTAKGKHSAAATAPTASAQAPSPAASPHKHRKNKAKKVAAWILGFLAGAIAGCLSGFIFSLLFKIIIAAIKGGSKNSGPSIFAPKLIKREDLAFLEKEDALASLELIGKGGCGEVYKAELPEKSGRMFAIKKITQPAKEAAELADEDSRFMNKKMRQIKSEIRTVGEIRHRNLLPLVAHVHRPDCHYLVYELMKNGSLQDMLNQVSAGVKELDWLTRHNIALGVASGLEYLHLNHTPRIIHRDLKPANVLLDDNMEARIADFGLAKAMPDAQTHMTASNVAGTVGYIAPEYHQTLKFTDKCDIYGFGVLLGVLVIGKLPSDEFFQDTDEMSLVKWMKNVMTSDNPRRAIDPKLRGKGWEEQMLLALKIACFCTMDNPKERPNSKDVRCMLSQIKHDVPEAETPSSQNV 640
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 73061596 73064365 + Tan0022000.1 Tan09g2325 764668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g2325 640 MobiDBLite consensus disorder prediction 240 254 - -
Tan09g2325 640 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 261 627 IPR051564 GO:0016020(PANTHER)
Tan09g2325 640 Pfam Protein kinase domain 336 617 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g2325 640 FunFam Leucine-rich repeat receptor-like protein kinase 425 633 - -
Tan09g2325 640 Gene3D Phosphorylase Kinase; domain 1 324 424 - -
Tan09g2325 640 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 70 161 - -
Tan09g2325 640 Pfam Leucine Rich Repeat 169 190 IPR001611 GO:0005515(InterPro)
Tan09g2325 640 ProSiteProfiles Protein kinase domain profile. 333 630 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g2325 640 MobiDBLite consensus disorder prediction 240 263 - -
Tan09g2325 640 SUPERFAMILY Protein kinase-like (PK-like) 331 626 IPR011009 -
Tan09g2325 640 Pfam Leucine rich repeat 98 157 IPR001611 GO:0005515(InterPro)
Tan09g2325 640 SMART serkin_6 333 626 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan09g2325 640 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan09g2325 640 Gene3D Ribonuclease Inhibitor 18 162 IPR032675 -
Tan09g2325 640 SUPERFAMILY L domain-like 49 207 - -
Tan09g2325 640 Gene3D Ribonuclease Inhibitor 163 217 IPR032675 -
Tan09g2325 640 Gene3D Transferase(Phosphotransferase) domain 1 425 639 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g1442 Tan-Chr6:19314071 Tan09g2325 Tan-Chr9:73061596 3.60E-43 dispersed
Tan09g2325 Tan-Chr9:73061596 Tan03g1376 Tan-Chr3:70266695 4.00E-52 dispersed
Tan09g2325 Tan-Chr9:73061596 Tan01g3893 Tan-Chr1:103922963 7.80E-56 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68103 PF00069 Pkinase 7.80E-43 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g2325 - - - 0.0