Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g2339 ATGGGAATGACCAGAGCAACGAAGAAAGCAACGGCAGGCACCATAATTCTTCTTTCTGTTTTACTTCCTCTACAAGAAATTGTTCATTTTGCTTTGGCTCTACCTCCTTCAGAGAGTAATCAGGACGTGGAGCAATCTGCAACTTCGAGACCTCTCGAGCAAGATGAAGAGCATGTTGATGAAGTACATTGTTCCAGAGAAAGAAGTAGGACAGCCTGGAATATTCTTGAGGAGCATTTGCTGCCGTTTATGGAGAAGGAAAATTATCAGGTTTCAACCAAGTGTAGGCTTCATCTAAACAACGATCTCTACAGAGATCAGGAGCAGCACAAGATTCATCTTGATATAAATCATTGGCAGTGTGGATACTGTCGAAAAAGCTTTCGTGCTGAAAAATTTCTTGATAAGCATTTTGACAACAGACACTACAATCTTCTGAATGTTAGCCACGGGAAGTGCTTAGCTGATTTATGTGGAGCATTGCATTGTGACCTAAAGATGGATACCAAGTCACGTAAATCTAAATGCAATCCGGCAGCTGCTGCTAGGAACAAGCATTTATGTGAGAGTCTTGCTGATAGCTGTTTTCCAATTAACGAGGGACCATCAGCTAGCCGTCTTCACGAGTTGTTTCTTCACCAATTCTGTGGAGCTCATTCTTGCACTGGGAAACAAAAGCCATTTTCTAGAGGAGCGGAGAGGCAACCAGGCATCTTTTACATGGCATCTTCAATACTGATTTTGATGTTGCTACCTATTTTCTATGTCATTGTCTATTTACACCGCAGAGAATCGAGAAATGGAATCGAAGTGCTTAGACGAATATCAAAAGCTGGACGTAAAACCAAACCCTTGTAA 858 41.72 MGMTRATKKATAGTIILLSVLLPLQEIVHFALALPPSESNQDVEQSATSRPLEQDEEHVDEVHCSRERSRTAWNILEEHLLPFMEKENYQVSTKCRLHLNNDLYRDQEQHKIHLDINHWQCGYCRKSFRAEKFLDKHFDNRHYNLLNVSHGKCLADLCGALHCDLKMDTKSRKSKCNPAAAARNKHLCESLADSCFPINEGPSASRLHELFLHQFCGAHSCTGKQKPFSRGAERQPGIFYMASSILILMLLPIFYVIVYLHRRESRNGIEVLRRISKAGRKTKPL 285
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 73123725 73129466 - Tan0018218.1 Tan09g2339 764682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g2339 285 MobiDBLite consensus disorder prediction 39 63 - -
Tan09g2339 285 MobiDBLite consensus disorder prediction 49 63 - -
Tan09g2339 285 ProSitePatterns Zinc finger C2H2 type domain signature. 121 142 IPR013087 -
Tan09g2339 285 PANTHER ZINC FINGER PROTEIN-RELATED 20 284 - GO:0000976(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan07g1456 Tan-Chr7:65715720 Tan09g2339 Tan-Chr9:73123725 5.20E-62 dispersed
Tan07g1457 Tan-Chr7:65715720 Tan09g2339 Tan-Chr9:73123725 5.30E-80 dispersed
Tan09g2339 Tan-Chr9:73123725 Tan09g2344 Tan-Chr9:73123725 6.90E-121 dispersed
Tan09g2339 Tan-Chr9:73123725 Tan09g2340 Tan-Chr9:73123725 1.10E-163 tandem
Tan07g1450 Tan-Chr7:65715720 Tan09g2339 Tan-Chr9:73123725 6.60E-92 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28437 None None None None Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g2339 - - - 0.0