Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g2340 ATGGGAATGACCAGAGCAACGAAGAAAGCAACGGCAGGCACCATAATTCTTCTTTCTGTTTTACTTCCTCTACAAGAAATTGTTCATTTTGCTTTGGCTCTACCTCCTTCAGAGAGTAATCAGGACGTGGAGCAATCTGCAACTTCGAGGCGATATCTTTTGTGTGCTTCTCATCCAAGACCTCTCGAGCAAGATGAAGAGCATGTTGATGAAGTACATTGTTCCAGAGAAAGAAGTAGGACAGCCTGGAATATTCTTGAGGAGCATTTGCTGCCGTTTATGGAGAAGGAAAATTATCAGGTTTCAACCAAGTGTAGGCTTCATCTAAACAACGATCTCTACAGAGATCAGGAGCAGCACAAGATTCATCTTGATATAAATCATTGGCAGTGTGGATACTGTCGAAAAAGCTTTCGTGCTGAAAAATTTCTTGATAAGCATTTTGACAACAGACACTACAATCTTCTGAATGTTAGCCACGGGAAGTGCTTAGCTGATTTATGTGGAGCATTGCATTGTGACCTAAAGATGGATACCAAGTCACGTAAATCTAAATGCAATCCGGCAGCTGCTGCTAGGAACAAGCATTTATGTGAGAGTCTTGCTGATAGCTGTTTTCCAATTAACGAGGGACCATCAGCTAGCCGTCTTCACGAGTTGTTTCTTCACCAATTCTGTGGAGCTCATTCTTGCACTGGGAAACAAAAGCCATTTTCTAGAGGAGCGGAGAGGCAACCAGGCATCTTTTACATGGCATCTTCAATACTGATTTTGATGTTGCTACCTATTTTCTATGTCATTGTCTATTTACACCGCAGAGAATCGAGAAATGGAATCGAAGTGCTTAGACGAATATCAAAAGCTGGACGTAAAACCAAACCCTTGTAA 888 41.78 MGMTRATKKATAGTIILLSVLLPLQEIVHFALALPPSESNQDVEQSATSRRYLLCASHPRPLEQDEEHVDEVHCSRERSRTAWNILEEHLLPFMEKENYQVSTKCRLHLNNDLYRDQEQHKIHLDINHWQCGYCRKSFRAEKFLDKHFDNRHYNLLNVSHGKCLADLCGALHCDLKMDTKSRKSKCNPAAAARNKHLCESLADSCFPINEGPSASRLHELFLHQFCGAHSCTGKQKPFSRGAERQPGIFYMASSILILMLLPIFYVIVYLHRRESRNGIEVLRRISKAGRKTKPL 295
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 73123725 73129466 - Tan0018218.2 Tan09g2340 764683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g2340 295 PANTHER ZINC FINGER PROTEIN-RELATED 63 294 - GO:0000976(PANTHER)
Tan09g2340 295 ProSitePatterns Zinc finger C2H2 type domain signature. 131 152 IPR013087 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g2340 Tan-Chr9:73123725 Tan09g2344 Tan-Chr9:73123725 2.30E-119 dispersed
Tan09g2339 Tan-Chr9:73123725 Tan09g2340 Tan-Chr9:73123725 1.10E-163 tandem
Tan09g2340 Tan-Chr9:73123725 Tan09g2341 Tan-Chr9:73123725 2.10E-128 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28438 None None None None Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g2340 - - - 0.0