Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g2343 ATGGGAATGACCAGAGCAACGAAGAAAGCAACGGCAGGCACCATAATTCTTCTTTCTGTTTTACTTCCTCTACAAGAAATTGTTCATTTTGCTTTGGCTCTACCTCCTTCAGAGAGTAATCAGGACGTGGAGCAATCTGCAACTTCGAGGCGATATCTTTTGTGTGCTTCTCATCCAAGACCTCTCGAGCAAGATGAAGAGCATGTTGATGAAGTACATTGTTCCAGAGAAAGAAGTAGGACAGCCTGGAATATTCTTGAGGAGCATTTGCTGCCGTTTATGGAGAAGGAAAATTATCAGGTTTCAACCAAGTGTAGGCTTCATCTAAACAACGATCTCTACAGAGATCAGGAGCAGCACAAGATTCATCTTGATATAAATCATTGGCAGTGTGGATACTGTCGAAAAAGCTTTCGTGCTGAAAAATTTCTTGATAAGCATTTTGACAACAGACACTACAATCTTCTGAATGTTAGCCACGGGAAGTGCTTAGCTGATTTATGTGGAGCATTGCATTGTGACCTAAAGATGGATACCAAGTCACGTAAATCTAAATGCAATCCGGCAGCTGCTGCTAGGAACAAGCATTTATGTGAGGTTGCTTAG 606 41.75 MGMTRATKKATAGTIILLSVLLPLQEIVHFALALPPSESNQDVEQSATSRRYLLCASHPRPLEQDEEHVDEVHCSRERSRTAWNILEEHLLPFMEKENYQVSTKCRLHLNNDLYRDQEQHKIHLDINHWQCGYCRKSFRAEKFLDKHFDNRHYNLLNVSHGKCLADLCGALHCDLKMDTKSRKSKCNPAAAARNKHLCEVA 201
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 73123725 73129466 - Tan0018218.5 Tan09g2343 764686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g2343 201 PANTHER ZINC FINGER PROTEIN-RELATED 63 200 - GO:0000976(PANTHER)
Tan09g2343 201 ProSitePatterns Zinc finger C2H2 type domain signature. 131 152 IPR013087 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan09g2342 Tan-Chr9:73123725 Tan09g2343 Tan-Chr9:73123725 9.70E-107 tandem
Tan09g2343 Tan-Chr9:73123725 Tan09g2344 Tan-Chr9:73123725 1.10E-107 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28441 None None None None Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g2343 - - - 0.0