Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g2370 ATGGCCGCAACAAATACGAATGTCGCCGCCAGCGGCGTCGACGACCGCGTCTTGGCCACCGCTCAGCAGATCGTCAAGAGCCTCAATACCCCTAAAGAGGTTCGTGAGGACATGCTCTTGATTCTCTCCAGCTTTGATAATCGTCTTTCCAGTATCAGTAGTTTGATCAACAGTGACGACTCGAAGACCAAGAACGATATGTTGGACGCCGCGGAGAAGGTGATTCTTCGTTGGGACCCTAATTCCGATGAATCGAGACGGTCGCTTAATTGGGAGGACTCGCCGGACGAGGCGGCTGAGTATTTATCGGCGGTGGATGATATACTCCGGTTACTGGAAGACCTTTCGATTGGGTCCGAGTCGACTGAGATCGTAGACCGGGCCGAAAACGCGATCCAAATGGCGATGTGTCGGCTCGAGACCGAATTTCGCCATATCCTGATCCAGAGCACAGTCCCTCTCGACGCCGAGCGGCTCTACGGCTCGATCCGAAGAGTTCACCTCTCCTTTGCGTCCAATTACAGTGAAATTGACGATGAATTCGAGAGTTTCGGCGAGGAAAGTCGCAGTTCCGGGCGATTCCATGAGCGAGGAGCGACAATTGGAGAAGATTCTTGGGTCGATTTGATCCATCCTGATGCGGCCGTTGATCTGTCGGAGATTGCGGACCGTATGATTCGTTCTGGCTATGAAAAGGAATGTGTTCAAGTCTACAGCACTGTTCGCCGTGATGCTTTGGACGAGTGCTTGGCGATTCTTGGCGTTGAACGGCTCAGTATTGAGGAGGTTCAGAAAAGCGACTGGAAATTTTTGGACGAGAAGATGAAGAAATGGATTCAGGCCGTTAAAATTACAGTCCGGGTGATTTTGGACGGTGAGAAGAAGCTTTGTGATCAGATTTTCAATGGCGCCAATGAATCCAAGGAGATTTGCTTTAACGAAACAGCAAAAGGGTGTTTAATGCAGCTGTTGAATTTTGGTGAGGCAGTGGCAATTGGGAAGAGATCACCGGAGAAGCTGTTCCGAATCTTGGATATGTATGATGCTTTGGCTGGCGTTTTGCCTGACTTGGAAGCCATGGTTTCCGATGAGTTTCTGATCAGTGAAGCGCATGGAGTGTTGTCTGGACTGGGAGAAGCAGCCACAGGGACATTTGTGGAGTTTGAGAATGCGATTGAAAGCGAAAATTCAAAGAAAGCGATGCAAAATGCCGAGATTCACCCGCTTATTCGATATGTAATGAATTATGTGAGATTGCTGGTTGATTACAGTAAGACAATGAACTCTCTGTTAGAAGATGAGGAAGTACAAGACTTGCACAATGTGAGCAATAATGCCGATAATCTGCAGTTGGAAAGCACGTCGCCTTTAGCTCGTAGATTGTTAATGTTGTTATCATCTCTGGAATCCAATCTTGTGGATAAATCAAAACTTTATGAGGATGTTGCTATGCAGTTCATTTTTCTAATGAACAATATACTGTATATAGTGAAAAAAGTTAAAGACTCTGAGCTTGCGCAGCTGCTCGGTGATAACTGGCTTCGGAGGCATAGTGGCCAAATTCGCCAATATGAAACAAGTTACCTTAGAGCCTCTTGGAGCAAAGTTTTGTCTTGCTTAAAGGATGAGGGCATTGGTGGGAGCACAAGCAATGCCTCCAAGGTTGCTTTGAAGGAAAAGTTCAAGAATTTCAATGCAGGTTTTGAGGAAATCTGCAGGGTTCAGACATCTTGGAAGGTATCAGATGCTCAACTGCGCGATGAGCTGATAATATCCGTTTCGGAGAAGGTGATTCCTGCGTATCGCTCCTTCTTGGGAAGATTTAGAAATCAATTAGAGAGTGGAAGGCATTCTGGGAAGTACATAAAGTACACTCCGGAGGACTTAGAGAACTCTCTATCAGATTTGTTTGAAGGAACACCTGCTGTTTCACATCACTTGCGAAGAAAGGGTACTTGA 1959 46.61 MAATNTNVAASGVDDRVLATAQQIVKSLNTPKEVREDMLLILSSFDNRLSSISSLINSDDSKTKNDMLDAAEKVILRWDPNSDESRRSLNWEDSPDEAAEYLSAVDDILRLLEDLSIGSESTEIVDRAENAIQMAMCRLETEFRHILIQSTVPLDAERLYGSIRRVHLSFASNYSEIDDEFESFGEESRSSGRFHERGATIGEDSWVDLIHPDAAVDLSEIADRMIRSGYEKECVQVYSTVRRDALDECLAILGVERLSIEEVQKSDWKFLDEKMKKWIQAVKITVRVILDGEKKLCDQIFNGANESKEICFNETAKGCLMQLLNFGEAVAIGKRSPEKLFRILDMYDALAGVLPDLEAMVSDEFLISEAHGVLSGLGEAATGTFVEFENAIESENSKKAMQNAEIHPLIRYVMNYVRLLVDYSKTMNSLLEDEEVQDLHNVSNNADNLQLESTSPLARRLLMLLSSLESNLVDKSKLYEDVAMQFIFLMNNILYIVKKVKDSELAQLLGDNWLRRHSGQIRQYETSYLRASWSKVLSCLKDEGIGGSTSNASKVALKEKFKNFNAGFEEICRVQTSWKVSDAQLRDELIISVSEKVIPAYRSFLGRFRNQLESGRHSGKYIKYTPEDLENSLSDLFEGTPAVSHHLRRKGT 652
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 73415933 73418568 - Tan0021786.1 Tan09g2370 764713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g2370 652 PANTHER EXOCYST COMPLEX PROTEIN EXO70 54 640 IPR004140 GO:0000145(PANTHER)|GO:0000145(InterPro)|GO:0006887(PANTHER)|GO:0006887(InterPro)
Tan09g2370 652 Pfam Exocyst complex component Exo70 N-terminal 68 149 - -
Tan09g2370 652 FunFam Exocyst subunit Exo70 family protein 84 645 - -
Tan09g2370 652 SUPERFAMILY Cullin repeat-like 71 638 IPR016159 -
Tan09g2370 652 Gene3D Exocyst complex component Exo70 73 646 - -
Tan09g2370 652 Pfam Exo70 exocyst complex subunit C-terminal 276 635 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g1000 Tan-Chr3:66417460 Tan09g2370 Tan-Chr9:73415933 2.60E-61 dispersed
Tan04g2865 Tan-Chr4:87956744 Tan09g2370 Tan-Chr9:73415933 7.60E-125 dispersed
Tan05g0340 Tan-Chr5:2551565 Tan09g2370 Tan-Chr9:73415933 5.60E-91 dispersed
Tan08g1964 Tan-Chr8:71770631 Tan09g2370 Tan-Chr9:73415933 1.90E-78 dispersed
Tan08g2409 Tan-Chr8:75341689 Tan09g2370 Tan-Chr9:73415933 1.40E-110 dispersed
Tan03g1260 Tan-Chr3:68895106 Tan09g2370 Tan-Chr9:73415933 5.70E-99 transposed
Tan04g0719 Tan-Chr4:6197485 Tan09g2370 Tan-Chr9:73415933 1.20E-99 transposed
Tan04g1831 Tan-Chr4:56552413 Tan09g2370 Tan-Chr9:73415933 2.50E-121 transposed
Tan10g1341 Tan-Chr10:16134711 Tan09g2370 Tan-Chr9:73415933 1.20E-94 transposed
Tan11g1421 Tan-Chr11:12798608 Tan09g2370 Tan-Chr9:73415933 3.70E-91 transposed
Tan05g2361 Tan-Chr5:74963276 Tan09g2370 Tan-Chr9:73415933 3.20E-88 transposed
Tan05g2961 Tan-Chr5:81690153 Tan09g2370 Tan-Chr9:73415933 6.00E-261 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g2370 K07195 - csv:101205970 1129.01