Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g2425 ATGGCTGATCTCTGGAAAGATGCCCGACAAACTGTGATCCCGAGCTTTGTGTACACTGGTTCCCAAAGGGTAGTTAGGACGAGGTCATGGAGTTATGGGAAGAGCTTCGCAATTGAAGCTCCAAAGGAGAAGAACATAAAGATGTATTCACCGGCCTTCTACGCGGCATGTACAACAGGCGGTATTTTGAGTTGTGGACTTACTCACATGGCTGTCACTCCCCTCGATCTCGTCAAGTGCAATATGCAGATCAACCCAGCAAAGTACAAGAACATCTCCTCTGGTTTTGGAGTTCTGCTGAAGGAGCAGGGAGTGAGAGGATTCTTCCGGGGTTGGGTGCCGACCTTGCTTGGTTACAGTGCTCAGGGTGCCTGCAAGTTTGGATTTTACGAGTTCTTCAAGAAGTACTATTCTGACATGGTTGGACCGGAGAATGCAGCCAAGTACAAAACTTTCATATACCTTGCTGGTTCAGCATCTGCAGAAGTAATCGCCGATGTCGCTCTTTGCCCCATGGAGGCTGTCAAAGTTCGCGTCCAAACTCAACCTGGTTTTGCTCGGGGTTTGTCAGATGGCCTCCCAAAGTTTCTCAAGTCTGAGGGTGCTCTTGGGCTCTACAAAGGTTTGATTCCTCTTTGGGGACGTCAGATTCCATATACCATGATGAAATTTGCCTCTTTTGAAACAATTGTTGAGATGCTGTACAAGTATGCCATCCCAAAGCCTAAAGAGCAGTGTAGCAAATCCCTGCAGCTTGGAGTGAGCTTTGCTGGGGGATACGTGGCCGGTGTTCTCTGCGCTGTGGTCTCACACCCGGCTGATAATCTTGTTTCTTTTCTCAACAATGCCAAAGGAGCAACAGCCGGAGATGCTGTCAGGCAGCTAGGTTTATGGGGTCTTTTTACTCGTGGCCTTCCCCTTCGGATTGTTATGATTGGAACTCTTACCGGGTCTCAATGGGGGATATATGACGCATTCAAAGTTTTTGTTGGACTGCCAACAACTGGTGGTGCTACCCCTGCTCCGGCCGCCAACAAGTGA 1041 48.99 MADLWKDARQTVIPSFVYTGSQRVVRTRSWSYGKSFAIEAPKEKNIKMYSPAFYAACTTGGILSCGLTHMAVTPLDLVKCNMQINPAKYKNISSGFGVLLKEQGVRGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDMVGPENAAKYKTFIYLAGSASAEVIADVALCPMEAVKVRVQTQPGFARGLSDGLPKFLKSEGALGLYKGLIPLWGRQIPYTMMKFASFETIVEMLYKYAIPKPKEQCSKSLQLGVSFAGGYVAGVLCAVVSHPADNLVSFLNNAKGATAGDAVRQLGLWGLFTRGLPLRIVMIGTLTGSQWGIYDAFKVFVGLPTTGGATPAPAANK 346
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 73838281 73839773 - Tan0017657.1 Tan09g2425 764768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g2425 346 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 34 338 IPR044677 GO:0005315(PANTHER)|GO:0005315(InterPro)|GO:0031305(PANTHER)|GO:0035435(PANTHER)|GO:1990547(InterPro)
Tan09g2425 346 SUPERFAMILY Mitochondrial carrier 55 325 IPR023395 -
Tan09g2425 346 ProSiteProfiles Solute carrier (Solcar) repeat profile. 149 233 IPR018108 -
Tan09g2425 346 FunFam Phosphate carrier protein, mitochondrial 52 330 - -
Tan09g2425 346 ProSiteProfiles Solute carrier (Solcar) repeat profile. 52 136 IPR018108 -
Tan09g2425 346 Gene3D Mitochondrial carrier domain 53 330 IPR023395 -
Tan09g2425 346 Pfam Mitochondrial carrier protein 150 237 IPR018108 -
Tan09g2425 346 Pfam Mitochondrial carrier protein 54 139 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0561 Tan-Chr2:4968090 Tan09g2425 Tan-Chr9:73838281 2.80E-83 dispersed
Tan09g2425 Tan-Chr9:73838281 Tan11g1546 Tan-Chr11:14293363 2.50E-165 dispersed
Tan07g0051 Tan-Chr7:2617801 Tan09g2425 Tan-Chr9:73838281 3.10E-153 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g2425 K15102 - csv:101220423 582.793