Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan09g2441 ATGGATCCAGAAGCCCTCTCCGCCACTTTGTTCAAATGGGATCCTCGAGGAATGGTGGGGGGAGGCGGCGGCGCACCACTCCCAGCACCACTGCCGCCCTACTCGCTGCGGCCCAGGGAGTTGGGACTGGGAGGCCTGGAAGACTTGTTCCAGGCGTACGGGATCAGGTACTACACCGCCGCTAAAATTGCGGAACTCGGATTCACCGTCAGCACCCTCCTCGACATGAAAGACGAAGAGTTGGAGGACATGATGAACAGCATCTCTCACATTTTTCGCTGGGAGCTTCTGGTGGGTGAGAGATACGGAATTAAGGCTGCTGTAAGAGCCGAGCGCAGACGTCTAGATGACGAGATCGATTCCTCCAGGCGCCGTCACCTCTTGTCCAACGACACCACTACCAACGTTGTCCTCGATGCCCTTTCTCAGGAAGGGCTATCGGAAGAGCCGGTGCAGCAGGAGAAGGAGGTGGTGGGGAGCGGAGGAGGAGGAACGTGGGAGGCAGTTGCTGCGGCTGAGATCAGGAAGAAGCAGCGGAGGAGAAACGGATCAAAGAAGAAGCAGGTGATGGTGATGGAGGAGGATCACGATGAAAACGATGGAGCTGGGGACGAGGAGGATAATATGGAAGTCAGCGAGAGACAGCGGGAGCATCCATTCATCGTAACAGAGCCAGGGGAGGTTGCGCGGGGAAAGAAGAACGGCCTCGACTATCTCTTCCACCTCTATGAGCAGTGTCGTGAATTTTTGATCCAAGTCCAGAACATTGCAAAGGAACGAGGAGAAAAGTGTCCCACTAAGGTGACGAACCAAGTGTTTAGATACGCGAAAAAGGCGGGAGCAAGTTACATAAACAAGCCAAAAATGAGACACTACGTCCACTGCTATGCGCTGCATTGTCTGGAAGAGGAAGCGTCGAACGCATTGAGAAGGGCTTTCAAAGAAAGGGGTGAAAATGTGGGAGCTTGGCGACAGGCATGCTATAAGCCTCTGGTAGCCATAGCAGCTGCCCAAGGTTGGGACATCGATGCCATTTTCAACGCACATCCACGCCTAGCCATCTGGTATGTCCCTACCAAACTTCGCCAACTATGCCACGCCGAGCGCAACAGTGCCACAGCCTCCACCTCCGCCGCCGCCGATCACATGCCATTTTAA 1158 54.84 MDPEALSATLFKWDPRGMVGGGGGAPLPAPLPPYSLRPRELGLGGLEDLFQAYGIRYYTAAKIAELGFTVSTLLDMKDEELEDMMNSISHIFRWELLVGERYGIKAAVRAERRRLDDEIDSSRRRHLLSNDTTTNVVLDALSQEGLSEEPVQQEKEVVGSGGGGTWEAVAAAEIRKKQRRRNGSKKKQVMVMEEDHDENDGAGDEEDNMEVSERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLIQVQNIAKERGEKCPTKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLEEEASNALRRAFKERGENVGAWRQACYKPLVAIAAAQGWDIDAIFNAHPRLAIWYVPTKLRQLCHAERNSATASTSAAADHMPF 385
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 74018185 74020187 - Tan0018940.1 Tan09g2441 764784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan09g2441 385 PANTHER PROTEIN LEAFY 1 380 IPR002910 GO:0003677(InterPro)|GO:0006355(InterPro)
Tan09g2441 385 Pfam Floricaula / Leafy protein SAM domain 43 118 IPR035079 -
Tan09g2441 385 Coils Coil 105 125 - -
Tan09g2441 385 Pfam DNA Binding Domain (C-terminal) Leafy/Floricaula 210 373 IPR035209 GO:0003677(InterPro)
Tan09g2441 385 Gene3D Protein LEAFY 211 379 IPR038276 -
Tan09g2441 385 MobiDBLite consensus disorder prediction 177 214 - -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28450 PF17538 C_LFY_FLO 1.20E-108 CL0123 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan09g2441 - - - 0.0