Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan10g0014 ATGGAGGAGGAAGGATCAGAAAGATCAGTGGTTCCCAATTATCAACTTCAAGTCTCCAGCTTCCTGTCAAATGCACAACCCATTCACGAAATGGGGTTCGTCCACTTCGAAGACCACAACCAGGTCTTGAGTTTCTTGGCACCCAATAACAACATCGCCGCCACTGCACCCACCACCACCACCACCACCGCCATGCCTGCTGCCTTCCCTACGCCTCACGCCCACCTCCTTAGTAGACCTTCTTGGAGTAACGAGCAGGTGGTAACACTGGATCCGAAGCCCGGTAACGACGAAAACTGCACTGGTAGCGCTAGCGACGGCAGCAATTCATGGTGGAGAAACTCAAACGCAGATAAGAGTAAAGTGAAGGTGAGGAGAAAGCTGAGAGAGCCGCGTTTCTGTTTCCAGACCAGAAGCGATGTAGATGTGCTCGACGACGGATATAAATGGAGAAAATATGGCCAGAAAGTCGTCAAGAACAGCCTTCATCCTAGAAGCTACTACCGTTGCACGCATAGCAACTGCCGAGTGAAGAAGAGGGTGGAGCGACTGTCGGAGGATTGCCGGATGGTGATAACCACCTACGAAGGTAGACACAACCACTCCCCTTGCGACGACTCCAATTCTTCAGAGCACGAACCCTTTACATCCTTCTGA 657 51.6 MEEEGSERSVVPNYQLQVSSFLSNAQPIHEMGFVHFEDHNQVLSFLAPNNNIAATAPTTTTTTAMPAAFPTPHAHLLSRPSWSNEQVVTLDPKPGNDENCTGSASDGSNSWWRNSNADKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPFTSF 218
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 432088 434710 + Tan0012893.1 Tan10g0014 764808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan10g0014 218 Pfam WRKY DNA -binding domain 145 201 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan10g0014 218 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 88 209 IPR044810 GO:0003700(InterPro)
Tan10g0014 218 Gene3D WRKY domain 131 197 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan10g0014 218 ProSiteProfiles WRKY domain profile. 139 201 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan10g0014 218 FunFam WRKY transcription factor 57 130 204 - -
Tan10g0014 218 MobiDBLite consensus disorder prediction 91 114 - -
Tan10g0014 218 SUPERFAMILY WRKY DNA-binding domain 136 202 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan10g0014 218 MobiDBLite consensus disorder prediction 199 218 - -
Tan10g0014 218 SMART WRKY_cls 144 203 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan07g0951 Tan-Chr7:21089362 Tan10g0014 Tan-Chr10:432088 8.80E-37 dispersed
Tan10g0014 Tan-Chr10:432088 Tan11g0132 Tan-Chr11:1311187 8.90E-28 dispersed
Tan10g0014 Tan-Chr10:432088 Tan03g1377 Tan-Chr3:70290920 5.60E-38 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28455 PF03106 WRKY 1.30E-24 CL0274 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan10g0014 - - - 0.0