Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan10g0017 | ATGGAGAGGATTCCAGAGTCAAAAGCACTTCCATTATTACTGCCCATAGAGATGCTTCCAGAATCAAAGGTACGTCCGGGGAAATTTTGTGTTTTGGATGATATACCAAAAGCACATATGGCCTCAGCCAAGCAAGCTGGCCATTGGTCGAACATGCACTCAGCTAAGGTAAGAGAAGTGGGAAGATCTATTGGACAAGGATTTCAAGATCTAGAATTTTCTGCACCTATACGGACATTAAAGGGAAAATCCTCTTTTATGGGGCAGGAAGAACCTAAGCGTGATGCCACATTAAAGGGTAGTGGCAATTTAATTGAGGAAGGTGGTCCAAGTTCCTTCTCTGGGGCTAGCCACCCGCCAGAGCCCGTGGATATGGATCTAATGAGAACAGTTTATGTACCCATAGGGCAAAATAAACCTGACGCCGGCTGCTTGATGAAGAGTTTTTCCGTGAAGGGCCCTTTTCTAGAGGATCTTTCAATCAGGGTTCCAGCCAAGAAACCAAGCCCAGCTGTTCTCTCCCCTGCAGAAAGCTTAGTTGATGAACCGCATGACTTGGGTGTCTTATCTTCCCCCTTTTCAATTCCTCGTGCATCCCAAAATGCAGAAACCTCTCCCCTTCCCCCAGATTCTGAGGAGAAGGAATGTGTTTGGGATGCTTCTTTGCCCCCAAGTGGCAATGTAAGTCCACACAGTAGCATTGACAGTAGTGGAGTTGTCACAGCTATGAGCATTGTTAATAGTTGTGCTAGCACATATCGAAGTGATGGAATGGTTAGTATTGAAAGAAACTGTGAGAGTACAAAAGGAAGCATTAGAGGGGACTCCCTCGAGAGTGCAAAAACAAGTATTAGTCGTGCTAGTGATAGCAGCGGTCTTAGTGATGATAGTAATTGGAGCAACATTACAGGAAGTGCTAATAAGCCTCACAAAGGAAACGATCCTAGGTGGAAAGCCATTCTTGCTATTCGAGCTAGAGATGGAATATTAGGCATGAGCCATTTTAGACTGCTGAAAAGACTTGGATGTGGTGATATTGGTAGTGTTTATCTCTCAGAGCTAAGTGGGACTCGGTGTTATTTTGCAATGAAAGTAATGGACAAGGCATCGCTTGCTATCAGGAAGAAGTTAACGAGAGCTCAGACAGAAAGGGAGATCTTGCAGTTACTTGACCATCCATTTCTGCCGACTTTGTACACCCACTTTGAGACCGACAGATTTTCCTGTCTAGTAATGGAATATTGTCCAGGGGGAGACCTGCACACATTGAGGCAACGACAGCCAGGAAAACACTTCTCTGAGTATGCTGCAAGGTTTTATGCAGCAGAAGTTCTACTGGCACTCGAATATCTTCACATGCTTGGAGTTGTCTATAGGGACTTGAAACCAGAGAATGTACTGGTTCGTGATGATGGCCACATAATGCTCTCAGATTTCGACCTTTCACTAAGATGTGCAGTGTCACCCACCCTGATAAAAACCTCATACGATTCTGACCCATCAAAACGAGCTGCATTTTGTGTCCAGCCTGCCTGTATTGAGCCGTCATCAGTTTGCATCCAACCTGCATGCTTTATTCCTCGGCTCTTCCCTCAGAAAAGCAAAAAGAAAAGTCCCAAGCCTCGAAGTGAGCTGGGATTGCAATCGAGTACACTTCCCGAGCTGGTAGCAGAGCCCACTGCTGCCCGATCCATGTCTTTTGTTGGCACCCACGAATACCTAGCCCCTGAAATTATTAAAGGAGAGGGTCATGGAAGTGCTGTTGATTGGTGGACTTTTGGCATTTTCTTGCACGAACTATTGTACGGAAAAACCCCATTCAAGGGATCAGGAAACAGAGCCACACTATTCAATGTAGTAGGGCAGCAACTGAAGTTCCCAGAGTCTCCAGCAACTAGTTATGCTAGCCGAGATCTTATTCGAGGTTTACTAGTAAAGGAGCCACAGCATCGACTCGGGGTGAAGAGGGGTGCAACCGAGATCAAGCAACATCCTTTCTTTGAAGGTGTGAATTGGGCTTTGATACGATGCAGCACGCCCCCAGAAGTGCCAAGACCAATGGAGGCCGAACTGCCTAAGTTTGGGGTAGTTGACACAACAGGGGTTGGCGGCAGCAGCAGCAAGAGAATGGTAGGTACAGATGTTGTTAAGTCTGGTGGTCAATATCTTGACTTCGAGTTCTTTTAA | 2187 | 46.04 | MERIPESKALPLLLPIEMLPESKVRPGKFCVLDDIPKAHMASAKQAGHWSNMHSAKVREVGRSIGQGFQDLEFSAPIRTLKGKSSFMGQEEPKRDATLKGSGNLIEEGGPSSFSGASHPPEPVDMDLMRTVYVPIGQNKPDAGCLMKSFSVKGPFLEDLSIRVPAKKPSPAVLSPAESLVDEPHDLGVLSSPFSIPRASQNAETSPLPPDSEEKECVWDASLPPSGNVSPHSSIDSSGVVTAMSIVNSCASTYRSDGMVSIERNCESTKGSIRGDSLESAKTSISRASDSSGLSDDSNWSNITGSANKPHKGNDPRWKAILAIRARDGILGMSHFRLLKRLGCGDIGSVYLSELSGTRCYFAMKVMDKASLAIRKKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSYDSDPSKRAAFCVQPACIEPSSVCIQPACFIPRLFPQKSKKKSPKPRSELGLQSSTLPELVAEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLKFPESPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPMEAELPKFGVVDTTGVGGSSSKRMVGTDVVKSGGQYLDFEFF | 728 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 455220 | 461969 | - | Tan0002348.1 | Tan10g0017 | 764811 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan10g0017 | 728 | Gene3D | Transferase(Phosphotransferase) domain 1 | 419 | 490 | - | - | |
Tan10g0017 | 728 | MobiDBLite | consensus disorder prediction | 269 | 308 | - | - | |
Tan10g0017 | 728 | Gene3D | Transferase(Phosphotransferase) domain 1 | 563 | 684 | - | - | |
Tan10g0017 | 728 | ProSiteProfiles | Protein kinase domain profile. | 335 | 667 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan10g0017 | 728 | Pfam | Protein kinase domain | 564 | 667 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan10g0017 | 728 | Pfam | Protein kinase domain | 336 | 486 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan10g0017 | 728 | MobiDBLite | consensus disorder prediction | 190 | 234 | - | - | |
Tan10g0017 | 728 | MobiDBLite | consensus disorder prediction | 193 | 207 | - | - | |
Tan10g0017 | 728 | FunFam | serine/threonine-protein kinase D6PK-like | 562 | 685 | - | - | |
Tan10g0017 | 728 | FunFam | Serine/threonine-protein kinase D6PK-like | 333 | 418 | - | - | |
Tan10g0017 | 728 | PANTHER | FLIPPASE KINASE 1-RELATED | 215 | 688 | - | GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER) | |
Tan10g0017 | 728 | MobiDBLite | consensus disorder prediction | 83 | 121 | - | - | |
Tan10g0017 | 728 | Gene3D | Phosphorylase Kinase; domain 1 | 333 | 418 | - | - | |
Tan10g0017 | 728 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 456 | 468 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan10g0017 | 728 | MobiDBLite | consensus disorder prediction | 269 | 312 | - | - | |
Tan10g0017 | 728 | CDD | STKc_phototropin_like | 333 | 686 | - | - | |
Tan10g0017 | 728 | SMART | serkin_6 | 335 | 667 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan10g0017 | 728 | FunFam | serine/threonine-protein kinase D6PK-like | 419 | 486 | - | - | |
Tan10g0017 | 728 | SUPERFAMILY | Protein kinase-like (PK-like) | 317 | 691 | IPR011009 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan05g0142 | Tan-Chr5:1118756 | Tan10g0017 | Tan-Chr10:455220 | 8.40E-113 | dispersed | |
Tan07g0730 | Tan-Chr7:11679552 | Tan10g0017 | Tan-Chr10:455220 | 8.10E-62 | dispersed | |
Tan07g1405 | Tan-Chr7:65077508 | Tan10g0017 | Tan-Chr10:455220 | 6.90E-180 | dispersed | |
Tan08g0220 | Tan-Chr8:1979177 | Tan10g0017 | Tan-Chr10:455220 | 1.30E-111 | dispersed | |
Tan10g0017 | Tan-Chr10:455220 | Tan08g2248 | Tan-Chr8:73977320 | 8.40E-38 | dispersed | |
Tan10g0017 | Tan-Chr10:455220 | Tan05g1838 | Tan-Chr5:62340206 | 1.50E-188 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
68104 | PF00069 | Pkinase | 5.40E-36 | CL0016 | Tan | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan10g0017 | - | - | - | 0.0 |