Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan10g0017 ATGGAGAGGATTCCAGAGTCAAAAGCACTTCCATTATTACTGCCCATAGAGATGCTTCCAGAATCAAAGGTACGTCCGGGGAAATTTTGTGTTTTGGATGATATACCAAAAGCACATATGGCCTCAGCCAAGCAAGCTGGCCATTGGTCGAACATGCACTCAGCTAAGGTAAGAGAAGTGGGAAGATCTATTGGACAAGGATTTCAAGATCTAGAATTTTCTGCACCTATACGGACATTAAAGGGAAAATCCTCTTTTATGGGGCAGGAAGAACCTAAGCGTGATGCCACATTAAAGGGTAGTGGCAATTTAATTGAGGAAGGTGGTCCAAGTTCCTTCTCTGGGGCTAGCCACCCGCCAGAGCCCGTGGATATGGATCTAATGAGAACAGTTTATGTACCCATAGGGCAAAATAAACCTGACGCCGGCTGCTTGATGAAGAGTTTTTCCGTGAAGGGCCCTTTTCTAGAGGATCTTTCAATCAGGGTTCCAGCCAAGAAACCAAGCCCAGCTGTTCTCTCCCCTGCAGAAAGCTTAGTTGATGAACCGCATGACTTGGGTGTCTTATCTTCCCCCTTTTCAATTCCTCGTGCATCCCAAAATGCAGAAACCTCTCCCCTTCCCCCAGATTCTGAGGAGAAGGAATGTGTTTGGGATGCTTCTTTGCCCCCAAGTGGCAATGTAAGTCCACACAGTAGCATTGACAGTAGTGGAGTTGTCACAGCTATGAGCATTGTTAATAGTTGTGCTAGCACATATCGAAGTGATGGAATGGTTAGTATTGAAAGAAACTGTGAGAGTACAAAAGGAAGCATTAGAGGGGACTCCCTCGAGAGTGCAAAAACAAGTATTAGTCGTGCTAGTGATAGCAGCGGTCTTAGTGATGATAGTAATTGGAGCAACATTACAGGAAGTGCTAATAAGCCTCACAAAGGAAACGATCCTAGGTGGAAAGCCATTCTTGCTATTCGAGCTAGAGATGGAATATTAGGCATGAGCCATTTTAGACTGCTGAAAAGACTTGGATGTGGTGATATTGGTAGTGTTTATCTCTCAGAGCTAAGTGGGACTCGGTGTTATTTTGCAATGAAAGTAATGGACAAGGCATCGCTTGCTATCAGGAAGAAGTTAACGAGAGCTCAGACAGAAAGGGAGATCTTGCAGTTACTTGACCATCCATTTCTGCCGACTTTGTACACCCACTTTGAGACCGACAGATTTTCCTGTCTAGTAATGGAATATTGTCCAGGGGGAGACCTGCACACATTGAGGCAACGACAGCCAGGAAAACACTTCTCTGAGTATGCTGCAAGGTTTTATGCAGCAGAAGTTCTACTGGCACTCGAATATCTTCACATGCTTGGAGTTGTCTATAGGGACTTGAAACCAGAGAATGTACTGGTTCGTGATGATGGCCACATAATGCTCTCAGATTTCGACCTTTCACTAAGATGTGCAGTGTCACCCACCCTGATAAAAACCTCATACGATTCTGACCCATCAAAACGAGCTGCATTTTGTGTCCAGCCTGCCTGTATTGAGCCGTCATCAGTTTGCATCCAACCTGCATGCTTTATTCCTCGGCTCTTCCCTCAGAAAAGCAAAAAGAAAAGTCCCAAGCCTCGAAGTGAGCTGGGATTGCAATCGAGTACACTTCCCGAGCTGGTAGCAGAGCCCACTGCTGCCCGATCCATGTCTTTTGTTGGCACCCACGAATACCTAGCCCCTGAAATTATTAAAGGAGAGGGTCATGGAAGTGCTGTTGATTGGTGGACTTTTGGCATTTTCTTGCACGAACTATTGTACGGAAAAACCCCATTCAAGGGATCAGGAAACAGAGCCACACTATTCAATGTAGTAGGGCAGCAACTGAAGTTCCCAGAGTCTCCAGCAACTAGTTATGCTAGCCGAGATCTTATTCGAGGTTTACTAGTAAAGGAGCCACAGCATCGACTCGGGGTGAAGAGGGGTGCAACCGAGATCAAGCAACATCCTTTCTTTGAAGGTGTGAATTGGGCTTTGATACGATGCAGCACGCCCCCAGAAGTGCCAAGACCAATGGAGGCCGAACTGCCTAAGTTTGGGGTAGTTGACACAACAGGGGTTGGCGGCAGCAGCAGCAAGAGAATGGTAGGTACAGATGTTGTTAAGTCTGGTGGTCAATATCTTGACTTCGAGTTCTTTTAA 2187 46.04 MERIPESKALPLLLPIEMLPESKVRPGKFCVLDDIPKAHMASAKQAGHWSNMHSAKVREVGRSIGQGFQDLEFSAPIRTLKGKSSFMGQEEPKRDATLKGSGNLIEEGGPSSFSGASHPPEPVDMDLMRTVYVPIGQNKPDAGCLMKSFSVKGPFLEDLSIRVPAKKPSPAVLSPAESLVDEPHDLGVLSSPFSIPRASQNAETSPLPPDSEEKECVWDASLPPSGNVSPHSSIDSSGVVTAMSIVNSCASTYRSDGMVSIERNCESTKGSIRGDSLESAKTSISRASDSSGLSDDSNWSNITGSANKPHKGNDPRWKAILAIRARDGILGMSHFRLLKRLGCGDIGSVYLSELSGTRCYFAMKVMDKASLAIRKKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSYDSDPSKRAAFCVQPACIEPSSVCIQPACFIPRLFPQKSKKKSPKPRSELGLQSSTLPELVAEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLKFPESPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPMEAELPKFGVVDTTGVGGSSSKRMVGTDVVKSGGQYLDFEFF 728
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 455220 461969 - Tan0002348.1 Tan10g0017 764811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan10g0017 728 Gene3D Transferase(Phosphotransferase) domain 1 419 490 - -
Tan10g0017 728 MobiDBLite consensus disorder prediction 269 308 - -
Tan10g0017 728 Gene3D Transferase(Phosphotransferase) domain 1 563 684 - -
Tan10g0017 728 ProSiteProfiles Protein kinase domain profile. 335 667 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan10g0017 728 Pfam Protein kinase domain 564 667 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan10g0017 728 Pfam Protein kinase domain 336 486 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan10g0017 728 MobiDBLite consensus disorder prediction 190 234 - -
Tan10g0017 728 MobiDBLite consensus disorder prediction 193 207 - -
Tan10g0017 728 FunFam serine/threonine-protein kinase D6PK-like 562 685 - -
Tan10g0017 728 FunFam Serine/threonine-protein kinase D6PK-like 333 418 - -
Tan10g0017 728 PANTHER FLIPPASE KINASE 1-RELATED 215 688 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Tan10g0017 728 MobiDBLite consensus disorder prediction 83 121 - -
Tan10g0017 728 Gene3D Phosphorylase Kinase; domain 1 333 418 - -
Tan10g0017 728 ProSitePatterns Serine/Threonine protein kinases active-site signature. 456 468 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan10g0017 728 MobiDBLite consensus disorder prediction 269 312 - -
Tan10g0017 728 CDD STKc_phototropin_like 333 686 - -
Tan10g0017 728 SMART serkin_6 335 667 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan10g0017 728 FunFam serine/threonine-protein kinase D6PK-like 419 486 - -
Tan10g0017 728 SUPERFAMILY Protein kinase-like (PK-like) 317 691 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g0142 Tan-Chr5:1118756 Tan10g0017 Tan-Chr10:455220 8.40E-113 dispersed
Tan07g0730 Tan-Chr7:11679552 Tan10g0017 Tan-Chr10:455220 8.10E-62 dispersed
Tan07g1405 Tan-Chr7:65077508 Tan10g0017 Tan-Chr10:455220 6.90E-180 dispersed
Tan08g0220 Tan-Chr8:1979177 Tan10g0017 Tan-Chr10:455220 1.30E-111 dispersed
Tan10g0017 Tan-Chr10:455220 Tan08g2248 Tan-Chr8:73977320 8.40E-38 dispersed
Tan10g0017 Tan-Chr10:455220 Tan05g1838 Tan-Chr5:62340206 1.50E-188 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
68104 PF00069 Pkinase 5.40E-36 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan10g0017 - - - 0.0