Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan10g0077 ATGTTCAACTGGGTTCACTCCAAGTTCCACTACAACCCTCCTAAAGATCGAAATGCAAGGAGAAGGAACACGGAATCTATCACGAAGGAGGCCAAAAGACAAGGTTTAGCAAAGCAAGTCGATGAGATCGTTGATAATCTTGGTGATTGGAAGATCAATGGCCGTCGTCTTACAATTTTCTTAATGGGGTTTGAAAGATCATCAAAACCCAGAAATTATAAAGTGGAATATTTCCATTTGAAAGAGGGAAAAAAAGATGAAGTTGTTGATAATGTTGTGGACGACGACGATGATGATGAGCGGATCCCATTAATGGCGACGACATTTCAGAACAACTTTGACGACAATGATGAGTTTTGTACTGAATTCGAAAAGTCCCAAGTTGTCGTGGCAATCGAACGACATGTCGCTCAAAGACTCCGCCGGAGAGTGACGCTGGCGGACCTGTTCGTGGCGGATGTCGATGGGAACCCAGAGGCTCCGGCGCCGGAGAAAGATGCGGCGCAAGATTTGCAGGAGAAATTGCCGGATGTTGAGACGGCCGACGGCAGCTGCTTTGTCAAGAAGCCGAAGGCGGCGGCGGAGCCACCTGCGAGAAATCTCCGCTGCTCCTGTTTGAGATCCCATCTTTTACCATCAATGGAGTTTCTAGAATTGTGTTTGATTGTGGGAGAAATGGGTTCGGATCCTAAGGTTTTCGTCTTCGATGAAGTTGCTAAACACAATCACCAGCGCGATTGTTGGCTTATAATCTCTGGAAAGGTATATGATGTCACCCCTTTTCTGGAAGAACATCCTGGAGGTGATGAAGTCTTATTATTAGCTGCTGAAAAAGATGCAACTGATGATTTTGAAAATGTGGGTCACAGTCTATCTGCAATAGAGCAAATGGAAAAATATTATATTGGCAATGTTGACATGTCTACCATTCCGAAACCGATCGATTATCGACCACCTACATCCCAATCAGCAACAGCAACGTCGTCTTCTCAATCTTCAGGATCTTTGCTAACAGTACTGCAAATTCTGATTCCCCTGCTGATTTTGAGTGTTGCATTTTATCTGCAATACTATGGTAAAAAACAGTAA 1089 44.26 MFNWVHSKFHYNPPKDRNARRRNTESITKEAKRQGLAKQVDEIVDNLGDWKINGRRLTIFLMGFERSSKPRNYKVEYFHLKEGKKDEVVDNVVDDDDDDERIPLMATTFQNNFDDNDEFCTEFEKSQVVVAIERHVAQRLRRRVTLADLFVADVDGNPEAPAPEKDAAQDLQEKLPDVETADGSCFVKKPKAAAEPPARNLRCSCLRSHLLPSMEFLELCLIVGEMGSDPKVFVFDEVAKHNHQRDCWLIISGKVYDVTPFLEEHPGGDEVLLLAAEKDATDDFENVGHSLSAIEQMEKYYIGNVDMSTIPKPIDYRPPTSQSATATSSSQSSGSLLTVLQILIPLLILSVAFYLQYYGKKQ 362
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1104879 1112071 - Tan0009368.1 Tan10g0077 764871

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Tan10g0077 362 PRINTS Cytochrome B5 signature 255 265 IPR001199 -
Tan10g0077 362 PRINTS Cytochrome B5 signature 265 279 IPR001199 -
Tan10g0077 362 PRINTS Cytochrome B5 signature 280 287 IPR001199 -
Tan10g0077 362 PRINTS Cytochrome B5 signature 293 305 IPR001199 -
Tan10g0077 362 PANTHER CYTOCHROME B5 228 357 IPR050668 GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER)
Tan10g0077 362 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 229 320 IPR036400 -
Tan10g0077 362 Gene3D - 227 309 IPR036400 -
Tan10g0077 362 FunFam Cytochrome b5 type B 227 310 - -
Tan10g0077 362 Pfam Cytochrome b5-like Heme/Steroid binding domain 236 305 IPR001199 -
Tan10g0077 362 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 230 306 IPR001199 -
Tan10g0077 362 SMART Cyt_b5_2 233 306 IPR001199 -
Tan10g0077 362 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 261 268 IPR018506 GO:0020037(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan10g0077 K23490 - - csv:101205000 214.542
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan07g2098 Tan-Chr7:72379437 Tan10g0077 Tan-Chr10:1104879 1.30E-29 dispersed
Tan08g0116 Tan-Chr8:1005662 Tan10g0077 Tan-Chr10:1104879 1.10E-13 dispersed
Tan10g0077 Tan-Chr10:1104879 Tan10g0527 Tan-Chr10:4230019 7.80E-37 dispersed
Tan06g1864 Tan-Chr6:47004799 Tan10g0077 Tan-Chr10:1104879 2.30E-10 transposed
Tan06g1866 Tan-Chr6:47175157 Tan10g0077 Tan-Chr10:1104879 2.50E-33 transposed
Tan10g0077 Tan-Chr10:1104879 Tan07g0521 Tan-Chr7:8904175 5.40E-38 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Tan07g0521 . 1 134 NADPH P450 reductases AT5G53560 79.1 2.7e-59 225.3
Tan10g0527 . 1 133 NADPH P450 reductases AT5G53560 67.7 2.7e-51 198.7
Tan06g2314 . 1 133 NADPH P450 reductases AT5G53560 64.7 1.7e-48 189.5
Tan07g0522 . 2 112 NADPH P450 reductases AT5G53560 76.6 2.9e-45 178.7
Tan07g2098 . 4 131 NADPH P450 reductases AT5G53560 64.8 3.8e-45 178.3
Tan10g0527 . 1 132 NADPH P450 reductases AT5G48810 64.2 1.5e-47 186.4
Tan06g2314 . 1 133 NADPH P450 reductases AT5G48810 60.0 2.8e-46 182.2
Tan07g0521 . 1 134 NADPH P450 reductases AT5G48810 60.3 1.8e-45 179.5
Tan07g2098 . 2 132 NADPH P450 reductases AT5G48810 60.9 1.2e-44 176.8
Tan10g0077 . 226 362 NADPH P450 reductases AT5G48810 51.8 2.3e-37 152.5
Tan10g0527 . 22 133 NADPH P450 reductases AT2G32720 83.9 1.4e-50 196.4
Tan06g2314 . 22 133 NADPH P450 reductases AT2G32720 75.0 1.0e-45 180.3
Tan07g2098 . 21 132 NADPH P450 reductases AT2G32720 71.4 6.7e-42 167.5
Tan07g0521 . 22 133 NADPH P450 reductases AT2G32720 67.0 1.7e-40 162.9
Tan07g0522 . 4 111 NADPH P450 reductases AT2G32720 68.5 1.1e-39 160.2
Tan02g2283 . 1 130 NADPH P450 reductases AT1G26340 58.2 5.4e-39 157.9
Tan03g0549 . 2 281 NADPH P450 reductases AT5G17770 81.1 5.0e-132 468.0
Tan08g1334 . 2 280 NADPH P450 reductases AT5G17770 80.3 1.2e-130 463.4
Tan08g1335 . 8 248 NADPH P450 reductases AT5G17770 86.3 5.6e-123 438.0
Tan07g0597 . 10 282 NADPH P450 reductases AT5G17770 73.3 7.1e-118 421.0
Tan08g1336 . 3 197 NADPH P450 reductases AT5G17770 87.7 6.6e-100 361.3
Tan08g1337 . 3 197 NADPH P450 reductases AT5G17770 87.7 6.6e-100 361.3
Tan03g0550 . 2 200 NADPH P450 reductases AT5G17770 80.4 2.0e-88 323.2
Tan07g0521 . 1 134 NADPH P450 reductases AT5G53560 79.1 2.7e-59 225.3
Tan10g0527 . 1 133 NADPH P450 reductases AT5G53560 67.7 2.7e-51 198.7
Tan06g2314 . 1 133 NADPH P450 reductases AT5G53560 64.7 1.7e-48 189.5
Tan07g0522 . 2 112 NADPH P450 reductases AT5G53560 76.6 2.9e-45 178.7
Tan07g2098 . 4 131 NADPH P450 reductases AT5G53560 64.8 3.8e-45 178.3
Tan10g0527 . 1 132 NADPH P450 reductases AT5G48810 64.2 1.5e-47 186.4
Tan06g2314 . 1 133 NADPH P450 reductases AT5G48810 60.0 2.8e-46 182.2
Tan07g0521 . 1 134 NADPH P450 reductases AT5G48810 60.3 1.8e-45 179.5
Tan07g2098 . 2 132 NADPH P450 reductases AT5G48810 60.9 1.2e-44 176.8
Tan10g0077 . 226 362 NADPH P450 reductases AT5G48810 51.8 2.3e-37 152.5
Tan10g0527 . 22 133 NADPH P450 reductases AT2G32720 83.9 1.4e-50 196.4
Tan06g2314 . 22 133 NADPH P450 reductases AT2G32720 75.0 1.0e-45 180.3
Tan07g2098 . 21 132 NADPH P450 reductases AT2G32720 71.4 6.7e-42 167.5
Tan07g0521 . 22 133 NADPH P450 reductases AT2G32720 67.0 1.7e-40 162.9
Tan07g0522 . 4 111 NADPH P450 reductases AT2G32720 68.5 1.1e-39 160.2
Tan02g2283 . 1 130 NADPH P450 reductases AT1G26340 58.2 5.4e-39 157.9
Tan03g0549 . 2 281 NADPH P450 reductases AT5G17770 81.1 5.0e-132 468.0
Tan08g1334 . 2 280 NADPH P450 reductases AT5G17770 80.3 1.2e-130 463.4
Tan08g1335 . 8 248 NADPH P450 reductases AT5G17770 86.3 5.6e-123 438.0
Tan07g0597 . 10 282 NADPH P450 reductases AT5G17770 73.3 7.1e-118 421.0
Tan08g1336 . 3 197 NADPH P450 reductases AT5G17770 87.7 6.6e-100 361.3
Tan08g1337 . 3 197 NADPH P450 reductases AT5G17770 87.7 6.6e-100 361.3
Tan03g0550 . 2 200 NADPH P450 reductases AT5G17770 80.4 2.0e-88 323.2
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0014357 0 2 0 0 0 1 1 1 1 1 1 1 1 0 1 1 1 0 0 1 1 0 1 1 1 1 1 1 1 0 22