Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan10g0077 ATGTTCAACTGGGTTCACTCCAAGTTCCACTACAACCCTCCTAAAGATCGAAATGCAAGGAGAAGGAACACGGAATCTATCACGAAGGAGGCCAAAAGACAAGGTTTAGCAAAGCAAGTCGATGAGATCGTTGATAATCTTGGTGATTGGAAGATCAATGGCCGTCGTCTTACAATTTTCTTAATGGGGTTTGAAAGATCATCAAAACCCAGAAATTATAAAGTGGAATATTTCCATTTGAAAGAGGGAAAAAAAGATGAAGTTGTTGATAATGTTGTGGACGACGACGATGATGATGAGCGGATCCCATTAATGGCGACGACATTTCAGAACAACTTTGACGACAATGATGAGTTTTGTACTGAATTCGAAAAGTCCCAAGTTGTCGTGGCAATCGAACGACATGTCGCTCAAAGACTCCGCCGGAGAGTGACGCTGGCGGACCTGTTCGTGGCGGATGTCGATGGGAACCCAGAGGCTCCGGCGCCGGAGAAAGATGCGGCGCAAGATTTGCAGGAGAAATTGCCGGATGTTGAGACGGCCGACGGCAGCTGCTTTGTCAAGAAGCCGAAGGCGGCGGCGGAGCCACCTGCGAGAAATCTCCGCTGCTCCTGTTTGAGATCCCATCTTTTACCATCAATGGAGTTTCTAGAATTGTGTTTGATTGTGGGAGAAATGGGTTCGGATCCTAAGGTTTTCGTCTTCGATGAAGTTGCTAAACACAATCACCAGCGCGATTGTTGGCTTATAATCTCTGGAAAGGTATATGATGTCACCCCTTTTCTGGAAGAACATCCTGGAGGTGATGAAGTCTTATTATTAGCTGCTGAAAAAGATGCAACTGATGATTTTGAAAATGTGGGTCACAGTCTATCTGCAATAGAGCAAATGGAAAAATATTATATTGGCAATGTTGACATGTCTACCATTCCGAAACCGATCGATTATCGACCACCTACATCCCAATCAGCAACAGCAACGTCGTCTTCTCAATCTTCAGGATCTTTGCTAACAGTACTGCAAATTCTGATTCCCCTGCTGATTTTGAGTGTTGCATTTTATCTGCAATACTATGGTAAAAAACAGTAA 1089 44.26 MFNWVHSKFHYNPPKDRNARRRNTESITKEAKRQGLAKQVDEIVDNLGDWKINGRRLTIFLMGFERSSKPRNYKVEYFHLKEGKKDEVVDNVVDDDDDDERIPLMATTFQNNFDDNDEFCTEFEKSQVVVAIERHVAQRLRRRVTLADLFVADVDGNPEAPAPEKDAAQDLQEKLPDVETADGSCFVKKPKAAAEPPARNLRCSCLRSHLLPSMEFLELCLIVGEMGSDPKVFVFDEVAKHNHQRDCWLIISGKVYDVTPFLEEHPGGDEVLLLAAEKDATDDFENVGHSLSAIEQMEKYYIGNVDMSTIPKPIDYRPPTSQSATATSSSQSSGSLLTVLQILIPLLILSVAFYLQYYGKKQ 362
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1104879 1112071 - Tan0009368.1 Tan10g0077 764871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan10g0077 362 PRINTS Cytochrome B5 signature 255 265 IPR001199 -
Tan10g0077 362 PRINTS Cytochrome B5 signature 265 279 IPR001199 -
Tan10g0077 362 PRINTS Cytochrome B5 signature 280 287 IPR001199 -
Tan10g0077 362 PRINTS Cytochrome B5 signature 293 305 IPR001199 -
Tan10g0077 362 PANTHER CYTOCHROME B5 228 357 IPR050668 GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER)
Tan10g0077 362 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 229 320 IPR036400 -
Tan10g0077 362 Gene3D - 227 309 IPR036400 -
Tan10g0077 362 FunFam Cytochrome b5 type B 227 310 - -
Tan10g0077 362 Pfam Cytochrome b5-like Heme/Steroid binding domain 236 305 IPR001199 -
Tan10g0077 362 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 230 306 IPR001199 -
Tan10g0077 362 SMART Cyt_b5_2 233 306 IPR001199 -
Tan10g0077 362 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 261 268 IPR018506 GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan07g2098 Tan-Chr7:72379437 Tan10g0077 Tan-Chr10:1104879 1.30E-29 dispersed
Tan08g0116 Tan-Chr8:1005662 Tan10g0077 Tan-Chr10:1104879 1.10E-13 dispersed
Tan10g0077 Tan-Chr10:1104879 Tan10g0527 Tan-Chr10:4230019 7.80E-37 dispersed
Tan06g1864 Tan-Chr6:47004799 Tan10g0077 Tan-Chr10:1104879 2.30E-10 transposed
Tan06g1866 Tan-Chr6:47175157 Tan10g0077 Tan-Chr10:1104879 2.50E-33 transposed
Tan10g0077 Tan-Chr10:1104879 Tan07g0521 Tan-Chr7:8904175 5.40E-38 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan10g0077 K23490 - csv:101205000 214.542